MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103148 bp
Accession: NZ_CP099597 Location: 1..103148 Organism: Pseudomonas siliginis strain OTU6BANIB1 Replicon: plasmid unnamed1
Accession: NZ_CP099597 Location: 1..103148 Organism: Pseudomonas siliginis strain OTU6BANIB1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NF676_RS00005 (NF676_00005) | 149..406 | + | 258 | WP_252886118.1 | helix-turn-helix transcriptional regulator | - |
| NF676_RS00010 (NF676_00010) | 432..1544 | - | 1113 | WP_252886119.1 | acyltransferase | - |
| NF676_RS00015 (NF676_00015) | 1780..3108 | - | 1329 | WP_252886120.1 | hypothetical protein | VF |
| NF676_RS00020 (NF676_00020) | 3132..4073 | - | 942 | WP_252886121.1 | Twitching mobility protein | VF |
| NF676_RS00025 (NF676_00025) | 4070..4600 | - | 531 | WP_252886122.1 | hypothetical protein | VF |
| NF676_RS00030 (NF676_00030) | 4620..5711 | - | 1092 | WP_252886123.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| NF676_RS00035 (NF676_00035) | 5708..7249 | - | 1542 | WP_252886124.1 | Type II secretion system protein E | VF |
| NF676_RS00040 (NF676_00040) | 7258..7785 | - | 528 | WP_252886125.1 | type IV pilus biogenesis protein PilP | - |
| NF676_RS00045 (NF676_00045) | 7772..9121 | - | 1350 | WP_252886126.1 | type 4b pilus protein PilO2 | - |
| NF676_RS00050 (NF676_00050) | 9125..10813 | - | 1689 | WP_252886127.1 | Outer membrane lipoprotein BfpB | VF |
| NF676_RS00055 (NF676_00055) | 10825..12336 | - | 1512 | WP_252886128.1 | hypothetical protein | VF |
| NF676_RS00060 (NF676_00060) | 12349..12804 | - | 456 | WP_252886129.1 | DotD/TraH family lipoprotein | - |
| NF676_RS00065 (NF676_00065) | 12865..15090 | - | 2226 | WP_252886130.1 | Protein TraI | Relaxase |
| NF676_RS00070 (NF676_00070) | 15087..15395 | - | 309 | WP_252886131.1 | plasmid mobilization protein MobA | - |
| NF676_RS00075 (NF676_00075) | 15635..16120 | + | 486 | WP_252886132.1 | hypothetical protein | - |
| NF676_RS00080 (NF676_00080) | 16110..16814 | + | 705 | WP_252886133.1 | protein mobD | - |
| NF676_RS00085 (NF676_00085) | 16807..17454 | + | 648 | WP_252886134.1 | hypothetical protein | - |
| NF676_RS00090 (NF676_00090) | 17617..17778 | + | 162 | WP_252886135.1 | hypothetical protein | - |
| NF676_RS00095 (NF676_00095) | 17828..18073 | - | 246 | WP_252886136.1 | hypothetical protein | - |
| NF676_RS00100 (NF676_00100) | 18092..18313 | - | 222 | WP_252886137.1 | hypothetical protein | - |
| NF676_RS00105 (NF676_00105) | 18330..18605 | - | 276 | WP_252886138.1 | hypothetical protein | - |
| NF676_RS00110 (NF676_00110) | 18634..18855 | - | 222 | WP_252886139.1 | hypothetical protein | - |
| NF676_RS00115 (NF676_00115) | 18867..19307 | - | 441 | WP_252886140.1 | hypothetical protein | - |
| NF676_RS00120 (NF676_00120) | 19323..20006 | - | 684 | WP_252886141.1 | hypothetical protein | - |
| NF676_RS00125 (NF676_00125) | 20027..20449 | - | 423 | WP_252886142.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NF676_RS00130 (NF676_00130) | 20479..20661 | - | 183 | WP_016359316.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NF676_RS00135 (NF676_00135) | 21089..21367 | + | 279 | WP_252886143.1 | hypothetical protein | - |
| NF676_RS00140 (NF676_00140) | 21374..22327 | - | 954 | WP_252886144.1 | non-homologous end-joining DNA ligase | - |
| NF676_RS00145 (NF676_00145) | 22603..23088 | - | 486 | WP_252886145.1 | hypothetical protein | - |
| NF676_RS00150 (NF676_00150) | 23170..23403 | - | 234 | WP_252886146.1 | hypothetical protein | - |
| NF676_RS00155 (NF676_00155) | 23421..23777 | - | 357 | WP_252886147.1 | hypothetical protein | - |
| NF676_RS00160 (NF676_00160) | 23797..24516 | - | 720 | WP_252886148.1 | hypothetical protein | - |
| NF676_RS00165 (NF676_00165) | 24622..24819 | - | 198 | WP_252886149.1 | hypothetical protein | - |
| NF676_RS00170 (NF676_00170) | 24835..25071 | - | 237 | WP_252886150.1 | hypothetical protein | - |
| NF676_RS00175 (NF676_00175) | 25204..25341 | - | 138 | WP_252886151.1 | hypothetical protein | - |
| NF676_RS00180 (NF676_00180) | 25356..25538 | - | 183 | WP_252886152.1 | hypothetical protein | - |
| NF676_RS00185 (NF676_00185) | 26441..26950 | - | 510 | WP_252886153.1 | hypothetical protein | - |
| NF676_RS00190 (NF676_00190) | 27049..27423 | - | 375 | WP_252886154.1 | hypothetical protein | - |
| NF676_RS00195 (NF676_00195) | 27441..27911 | - | 471 | WP_252886155.1 | hypothetical protein | - |
| NF676_RS00200 (NF676_00200) | 28253..28612 | - | 360 | WP_252886156.1 | hypothetical protein | - |
| NF676_RS00205 (NF676_00205) | 28625..29356 | - | 732 | WP_252886157.1 | hypothetical protein | - |
| NF676_RS00210 (NF676_00210) | 30071..30412 | - | 342 | WP_252886158.1 | hypothetical protein | - |
| NF676_RS00215 (NF676_00215) | 30681..30911 | - | 231 | WP_252886159.1 | hypothetical protein | - |
| NF676_RS00220 (NF676_00220) | 30973..31392 | - | 420 | WP_252886160.1 | hypothetical protein | - |
| NF676_RS00225 (NF676_00225) | 32065..32385 | - | 321 | WP_252886161.1 | hypothetical protein | - |
| NF676_RS00230 (NF676_00230) | 32476..32694 | - | 219 | WP_252886162.1 | hypothetical protein | - |
| NF676_RS00235 (NF676_00235) | 32703..32966 | - | 264 | WP_252886163.1 | hypothetical protein | - |
| NF676_RS00240 (NF676_00240) | 32978..33220 | - | 243 | WP_252886164.1 | hypothetical protein | - |
| NF676_RS00245 (NF676_00245) | 33236..33850 | - | 615 | WP_252886165.1 | hypothetical protein | - |
| NF676_RS00250 (NF676_00250) | 33952..34242 | - | 291 | WP_252886166.1 | hypothetical protein | - |
| NF676_RS00255 (NF676_00255) | 34363..34854 | - | 492 | WP_252886167.1 | hypothetical protein | - |
| NF676_RS00260 (NF676_00260) | 34956..35171 | - | 216 | WP_252886168.1 | hypothetical protein | - |
| NF676_RS00265 (NF676_00265) | 35325..35495 | - | 171 | WP_252886169.1 | hypothetical protein | - |
| NF676_RS00270 (NF676_00270) | 35497..35637 | - | 141 | WP_252886170.1 | hypothetical protein | - |
| NF676_RS00275 (NF676_00275) | 35998..36246 | - | 249 | WP_252886171.1 | hypothetical protein | - |
| NF676_RS00280 (NF676_00280) | 36377..36814 | - | 438 | WP_252886172.1 | hypothetical protein | - |
| NF676_RS00285 (NF676_00285) | 36858..37016 | - | 159 | WP_252886173.1 | hypothetical protein | - |
| NF676_RS00290 (NF676_00290) | 37064..37402 | - | 339 | WP_252886174.1 | hypothetical protein | - |
| NF676_RS00295 (NF676_00295) | 37480..37728 | - | 249 | WP_252886175.1 | adhesin biosynthesis transcription regulatory family protein | - |
| NF676_RS00300 (NF676_00300) | 37797..38468 | - | 672 | WP_252886176.1 | site-specific integrase | - |
| NF676_RS00305 (NF676_00305) | 38655..38831 | - | 177 | WP_252886177.1 | hypothetical protein | - |
| NF676_RS00310 (NF676_00310) | 39254..39490 | - | 237 | WP_252886178.1 | hypothetical protein | - |
| NF676_RS00315 (NF676_00315) | 40583..41599 | - | 1017 | WP_252886179.1 | ParB/RepB/Spo0J family partition protein | - |
| NF676_RS00320 (NF676_00320) | 41729..42889 | - | 1161 | WP_252886180.1 | ParA family protein | - |
| NF676_RS00325 (NF676_00325) | 43761..44045 | - | 285 | WP_252886181.1 | hypothetical protein | - |
| NF676_RS00330 (NF676_00330) | 44151..44396 | - | 246 | WP_252886182.1 | hypothetical protein | - |
| NF676_RS00335 (NF676_00335) | 44380..44673 | - | 294 | WP_252886183.1 | hypothetical protein | - |
| NF676_RS00340 (NF676_00340) | 45007..45909 | - | 903 | WP_252886184.1 | replication initiator protein A | - |
| NF676_RS00345 (NF676_00345) | 47225..47971 | + | 747 | WP_252886185.1 | hypothetical protein | VF |
| NF676_RS00350 (NF676_00350) | 47980..49209 | + | 1230 | WP_252886186.1 | hypothetical protein | VF |
| NF676_RS00355 (NF676_00355) | 49220..50581 | + | 1362 | WP_252886187.1 | conjugal transfer protein TraO | - |
| NF676_RS00360 (NF676_00360) | 50619..51458 | + | 840 | WP_252886188.1 | hypothetical protein | - |
| NF676_RS00365 (NF676_00365) | 51468..52001 | + | 534 | WP_252886189.1 | conjugal transfer protein TraQ | - |
| NF676_RS00370 (NF676_00370) | 52021..52476 | + | 456 | WP_252886075.1 | hypothetical protein | - |
| NF676_RS00375 (NF676_00375) | 52521..53267 | + | 747 | WP_252886076.1 | HNH endonuclease | - |
| NF676_RS00380 (NF676_00380) | 53284..56358 | + | 3075 | WP_252886077.1 | hypothetical protein | VF |
| NF676_RS00385 (NF676_00385) | 56355..57608 | + | 1254 | WP_252886078.1 | conjugal transfer protein TraW | - |
| NF676_RS00390 (NF676_00390) | 57608..58252 | + | 645 | WP_252886079.1 | hypothetical protein | - |
| NF676_RS00395 (NF676_00395) | 58249..60429 | + | 2181 | WP_252886080.1 | DotA/TraY family protein | - |
| NF676_RS00400 (NF676_00400) | 60567..61070 | + | 504 | WP_252886081.1 | hypothetical protein | - |
| NF676_RS00405 (NF676_00405) | 61103..61855 | + | 753 | WP_252886082.1 | hypothetical protein | - |
| NF676_RS00410 (NF676_00410) | 62170..62745 | + | 576 | WP_252886083.1 | hypothetical protein | - |
| NF676_RS00415 (NF676_00415) | 62735..63055 | + | 321 | WP_252886084.1 | hypothetical protein | - |
| NF676_RS00420 (NF676_00420) | 63060..63305 | - | 246 | WP_252886085.1 | hypothetical protein | - |
| NF676_RS00425 (NF676_00425) | 63680..64096 | - | 417 | WP_252886086.1 | hypothetical protein | - |
| NF676_RS00430 (NF676_00430) | 64517..65227 | - | 711 | WP_252886087.1 | hypothetical protein | - |
| NF676_RS00435 (NF676_00435) | 65202..65732 | - | 531 | WP_252886088.1 | hypothetical protein | - |
| NF676_RS00440 (NF676_00440) | 65993..68242 | + | 2250 | WP_252886089.1 | hypothetical protein | - |
| NF676_RS00445 (NF676_00445) | 68272..68823 | + | 552 | WP_252886090.1 | hypothetical protein | - |
| NF676_RS00450 (NF676_00450) | 68828..69262 | + | 435 | WP_252886091.1 | type IV pilus biogenesis protein PilM | - |
| NF676_RS00455 (NF676_00455) | 69259..69825 | + | 567 | WP_252886092.1 | hypothetical protein | VF |
| NF676_RS00460 (NF676_00460) | 69854..71035 | + | 1182 | WP_252886190.1 | Twitching mobility protein | VF |
| NF676_RS00465 (NF676_00465) | 71032..71301 | + | 270 | WP_252886093.1 | hypothetical protein | VF |
| NF676_RS00470 (NF676_00470) | 73108..75066 | - | 1959 | WP_252886094.1 | ATP-binding protein | - |
| NF676_RS00475 (NF676_00475) | 75189..75605 | - | 417 | WP_252886095.1 | hypothetical protein | - |
| NF676_RS00480 (NF676_00480) | 75736..76098 | + | 363 | WP_252886096.1 | hypothetical protein | - |
| NF676_RS00485 (NF676_00485) | 76124..76672 | + | 549 | WP_252886097.1 | N-acetyltransferase | - |
| NF676_RS00490 (NF676_00490) | 76669..77646 | + | 978 | WP_252886098.1 | IS91 family transposase ISWz1 | Transposase |
| NF676_RS00495 (NF676_00495) | 77853..78752 | - | 900 | WP_252886099.1 | SprT-like domain-containing protein | - |
| NF676_RS00500 (NF676_00500) | 79041..84032 | - | 4992 | WP_252886100.1 | DEAD/DEAH box helicase family protein | - |
| NF676_RS00505 (NF676_00505) | 84167..84472 | - | 306 | WP_252886101.1 | hypothetical protein | - |
| NF676_RS00510 (NF676_00510) | 84697..84894 | - | 198 | WP_252886102.1 | hypothetical protein | - |
| NF676_RS00515 (NF676_00515) | 85185..85574 | - | 390 | WP_252886103.1 | hypothetical protein | - |
| NF676_RS00520 (NF676_00520) | 85680..88202 | - | 2523 | WP_252886104.1 | type IA DNA topoisomerase | - |
| NF676_RS00525 (NF676_00525) | 88344..88742 | + | 399 | WP_252886105.1 | hypothetical protein | - |
| NF676_RS00530 (NF676_00530) | 88753..89871 | + | 1119 | WP_252886106.1 | conjugal transfer protein TrbA | - |
| NF676_RS00535 (NF676_00535) | 89876..90823 | + | 948 | WP_252886107.1 | DsbC family protein | - |
| NF676_RS00540 (NF676_00540) | 90875..92149 | + | 1275 | WP_252886108.1 | DNA primase | - |
| NF676_RS00545 (NF676_00545) | 92160..94385 | + | 2226 | WP_252886109.1 | hypothetical protein | VF |
| NF676_RS00550 (NF676_00550) | 94397..95779 | + | 1383 | WP_252886110.1 | hypothetical protein | - |
| NF676_RS00555 (NF676_00555) | 95811..96140 | + | 330 | WP_252886111.1 | hypothetical protein | - |
| NF676_RS00560 (NF676_00560) | 96291..97055 | - | 765 | WP_252886112.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| NF676_RS00565 (NF676_00565) | 97045..97488 | - | 444 | WP_252886113.1 | hypothetical protein | - |
| NF676_RS00570 (NF676_00570) | 97903..99681 | - | 1779 | WP_252886114.1 | DEAD/DEAH box helicase | - |
| NF676_RS00575 (NF676_00575) | 99678..100088 | - | 411 | WP_252886115.1 | hypothetical protein | - |
| NF676_RS00580 (NF676_00580) | 100146..100349 | - | 204 | WP_252886116.1 | hypothetical protein | - |
| NF676_RS00585 (NF676_00585) | 100595..101737 | - | 1143 | WP_252886117.1 | DNA cytosine methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|