MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP099588 Location: 4016569..4033113 Organism: Escherichia coli strain EMG2 Replicon: chromosome
Accession: NZ_CP099588 Location: 4016569..4033113 Organism: Escherichia coli strain EMG2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHF38_RS19610 (4013099) | 4013099..4013824 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| NHF38_RS19615 (4013861) | 4013861..4014400 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| NHF38_RS19620 (4014465) | 4014465..4015013 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| NHF38_RS19625 (4015495) | 4015495..4016091 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| NHF38_RS19630 (4016569) | 4016569..4017171 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NHF38_RS19635 (4018627) | 4018627..4019343 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NHF38_RS19640 (4019363) | 4019363..4020469 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NHF38_RS19645 (4020534) | 4020534..4021514 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NHF38_RS19650 (4021624) | 4021624..4021829 | + | 206 | Protein_3865 | HNH endonuclease | - |
| NHF38_RS19655 (4022097) | 4022097..4023337 | - | 1241 | Protein_3866 | helicase YjhR | - |
| NHF38_RS19660 (4023453) | 4023453..4023584 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NHF38_RS19665 (4024075) | 4024075..4024332 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NHF38_RS19670 (4024344) | 4024344..4024889 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| NHF38_RS19675 (4024945) | 4024945..4025691 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NHF38_RS19680 (4025860) | 4025860..4026078 | + | 219 | Protein_3871 | hypothetical protein | - |
| NHF38_RS19685 (4026116) | 4026116..4026232 | + | 117 | Protein_3872 | VOC family protein | - |
| NHF38_RS19690 (4026477) | 4026477..4027598 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| NHF38_RS19695 (4027595) | 4027595..4027873 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| NHF38_RS19700 (4027885) | 4027885..4029198 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| NHF38_RS19705 (4029211) | 4029211..4030017 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| NHF38_RS19710 (4030148) | 4030148..4030579 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| NHF38_RS19715 (4030591) | 4030591..4031223 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| NHF38_RS19720 (4031240) | 4031240..4032022 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NHF38_RS19725 (4032325) | 4032325..4033113 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| NHF38_RS19730 (4033118) | 4033118..4034023 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| NHF38_RS19735 (4034034) | 4034034..4036001 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| NHF38_RS19740 (4036108) | 4036108..4037457 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|