MGE detailed information
MGE type: Genomic_island MGE length: 51288 bp
Accession: NZ_CP099535 Location: 130235..181522 Organism: Pantoea ananatis strain JT1-188 Replicon: chromosome
Accession: NZ_CP099535 Location: 130235..181522 Organism: Pantoea ananatis strain JT1-188 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NG826_RS00590 (NG826_00590) | 125592..126140 | + | 549 | WP_252294276.1 | pili assembly chaperone | - |
| NG826_RS00595 (NG826_00595) | 126314..127303 | + | 990 | WP_263793722.1 | conjugal transfer protein TraE | - |
| NG826_RS00600 (NG826_00600) | 127394..128602 | + | 1209 | WP_263793723.1 | conjugal transfer protein TraF | - |
| NG826_RS00605 (NG826_00605) | 128656..129210 | + | 555 | WP_263775424.1 | hypothetical protein | - |
| NG826_RS00610 (NG826_00610) | 129676..130834 | - | 1159 | Protein_119 | IS30 family transposase ISCfr4 | Transposase |
| NG826_RS00615 (NG826_00615) | 131422..131652 | + | 231 | WP_028724117.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NG826_RS00620 (NG826_00620) | 131676..132074 | + | 399 | WP_033778077.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NG826_RS00625 (NG826_00625) | 132301..133176 | - | 876 | WP_050598417.1 | N-acetylmuramoyl-L-alanine amidase | - |
| NG826_RS00630 (NG826_00630) | 133206..133487 | - | 282 | WP_028724120.1 | LuxR C-terminal-related transcriptional regulator | - |
| NG826_RS00635 (NG826_00635) | 133896..134453 | + | 558 | WP_028724121.1 | Type-1 fimbrial protein, A chain | VF |
| NG826_RS00640 (NG826_00640) | 134516..135187 | + | 672 | WP_028724122.1 | putative fimbrial chaperone SfmC | VF |
| NG826_RS00645 (NG826_00645) | 135256..137751 | + | 2496 | WP_162150529.1 | Outer membrane usher protein SfmD | VF |
| NG826_RS00650 (NG826_00650) | 137748..138731 | + | 984 | WP_028724124.1 | fimbrial protein | - |
| NG826_RS00655 (NG826_00655) | 138724..139242 | + | 519 | WP_071994886.1 | putative fimbrial-like protein SfmF | VF |
| NG826_RS00660 (NG826_00660) | 139435..140331 | - | 897 | WP_071994887.1 | hypothetical protein | VF |
| NG826_RS00665 (NG826_00665) | 140659..141321 | - | 663 | WP_239642692.1 | amidohydrolase family protein | - |
| NG826_RS00670 (NG826_00670) | 142835..143179 | + | 345 | WP_033778078.1 | hypothetical protein | - |
| NG826_RS00675 (NG826_00675) | 143392..143781 | - | 390 | Protein_132 | integrase core domain-containing protein | - |
| NG826_RS00680 (NG826_00680) | 143893..144417 | + | 525 | Protein_133 | IS3 family transposase ISAs9 | Transposase |
| NG826_RS00685 (NG826_00685) | 144400..144683 | - | 284 | Protein_134 | IS3 family transposase IS1400 | Transposase |
| NG826_RS00690 (NG826_00690) | 144770..144967 | + | 198 | Protein_135 | IS5/IS1182 family transposase | - |
| NG826_RS00695 (NG826_00695) | 145039..145299 | - | 261 | WP_050598418.1 | LuxR C-terminal-related transcriptional regulator | - |
| NG826_RS00700 (NG826_00700) | 145580..145757 | - | 178 | Protein_137 | YadA-like family protein | - |
| NG826_RS00705 (NG826_00705) | 145832..146209 | - | 378 | WP_155301450.1 | hypothetical protein | - |
| NG826_RS00710 (NG826_00710) | 146629..147480 | - | 852 | WP_263793724.1 | HTH-type transcriptional activator RhaS | VF |
| NG826_RS00715 (NG826_00715) | 147895..148209 | + | 315 | Protein_140 | transposase | - |
| NG826_RS00720 (NG826_00720) | 148482..149081 | - | 600 | WP_028724130.1 | nitroreductase family protein | - |
| NG826_RS00725 (NG826_00725) | 149333..151897 | - | 2565 | WP_252294287.1 | hypothetical protein | VF |
| NG826_RS00730 (NG826_00730) | 152257..152472 | + | 216 | WP_028724132.1 | IS66 family transposase ISCro1 | Transposase |
| NG826_RS00735 (NG826_00735) | 153590..154006 | + | 417 | WP_028724133.1 | hypothetical protein | - |
| NG826_RS00740 (NG826_00740) | 154189..154965 | - | 777 | WP_028724134.1 | N-acetylmuramoyl-L-alanine amidase | - |
| NG826_RS00745 (NG826_00745) | 155400..155997 | + | 598 | Protein_146 | IS66 family transposase ISSfl3 | Transposase |
| NG826_RS00750 (NG826_00750) | 156003..157040 | + | 1038 | Protein_147 | IS66 family transposase ISCro1 | Transposase |
| NG826_RS00755 (NG826_00755) | 157353..158219 | + | 867 | WP_239642694.1 | MBL fold metallo-hydrolase | - |
| NG826_RS00760 (NG826_00760) | 158273..158797 | + | 525 | WP_028724137.1 | phenolic acid decarboxylase | - |
| NG826_RS00765 (NG826_00765) | 159101..159552 | + | 452 | Protein_150 | IS66 family transposase ISCro1 | Transposase |
| NG826_RS00770 (NG826_00770) | 160048..161040 | - | 993 | WP_239642695.1 | LysR family transcriptional regulator | - |
| NG826_RS00775 (NG826_00775) | 161398..162534 | + | 1137 | WP_252294963.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| NG826_RS00780 (NG826_00780) | 162607..166287 | + | 3681 | WP_263793725.1 | hypothetical protein | VF |
| NG826_RS00785 (NG826_00785) | 166428..166664 | + | 237 | WP_263794286.1 | TraR/DksA C4-type zinc finger protein | - |
| NG826_RS00790 (NG826_00790) | 166695..167526 | + | 832 | Protein_155 | IS3 family transposase | - |
| NG826_RS00795 (NG826_00795) | 167791..168034 | + | 244 | Protein_156 | transposase | - |
| NG826_RS00800 (NG826_00800) | 168189..169202 | + | 1014 | WP_221611352.1 | LysR family transcriptional regulator | - |
| NG826_RS00805 (NG826_00805) | 169446..169704 | - | 259 | Protein_158 | IS3 family transposase IS1400 | Transposase |
| NG826_RS00810 (NG826_00810) | 170306..170440 | - | 135 | Protein_159 | SAM-dependent DNA methyltransferase | - |
| NG826_RS00815 (NG826_00815) | 170578..171525 | - | 948 | WP_263793726.1 | DUF1281 domain-containing protein | - |
| NG826_RS00820 (NG826_00820) | 171620..172078 | - | 459 | Protein_161 | zincin-like metallopeptidase domain-containing protein | - |
| NG826_RS00825 (NG826_00825) | 172179..172481 | + | 303 | WP_263793727.1 | hypothetical protein | - |
| NG826_RS00830 (NG826_00830) | 173693..174001 | - | 309 | WP_110983071.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NG826_RS00835 (NG826_00835) | 174469..175740 | + | 1272 | WP_110983070.1 | RCCLKC-tail radical SAM protein | - |
| NG826_RS00840 (NG826_00840) | 175755..176030 | + | 276 | WP_146236430.1 | hypothetical protein | - |
| NG826_RS00845 (NG826_00845) | 176041..177246 | + | 1206 | WP_181427613.1 | ATP-grasp domain-containing protein | - |
| NG826_RS00850 (NG826_00850) | 177215..178435 | + | 1221 | WP_110983068.1 | MFS transporter | - |
| NG826_RS00855 (NG826_00855) | 178422..179213 | + | 792 | WP_110983067.1 | putative arsinothricin biosynthesis methyltransferase ArsM | - |
| NG826_RS00860 (NG826_00860) | 179224..180321 | + | 1098 | WP_110983066.1 | GTP-binding protein | - |
| NG826_RS00865 (NG826_00865) | 180325..180987 | + | 663 | WP_110983065.1 | aquaporin | - |
| NG826_RS00870 (NG826_00870) | 181025..181522 | - | 498 | WP_110983064.1 | GNAT family N-acetyltransferase | - |
| NG826_RS00875 (NG826_00875) | 181601..181771 | + | 171 | Protein_172 | arsenate reductase | - |
| NG826_RS00880 (NG826_00880) | 181834..182547 | - | 714 | WP_181427614.1 | arsenical resistance protein ArsH | - |
| NG826_RS00885 (NG826_00885) | 182559..182885 | - | 327 | WP_110983062.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NG826_RS00890 (NG826_00890) | 183067..183704 | + | 638 | Protein_175 | transposase | - |
| NG826_RS00895 (NG826_00895) | 183733..184359 | + | 627 | WP_263793728.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| NG826_RS00900 (NG826_00900) | 184525..185799 | - | 1275 | WP_028722908.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|