MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66758 bp
Accession: NZ_CP099512 Location: 1..66758 Organism: Lelliottia amnigena strain P13 Replicon: plasmid pP13-67
Accession: NZ_CP099512 Location: 1..66758 Organism: Lelliottia amnigena strain P13 Replicon: plasmid pP13-67
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ01_RS21830 (NFJ01_21830) | 111..671 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NFJ01_RS21835 (NFJ01_21835) | 675..3641 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NFJ01_RS21840 (NFJ01_21840) | 3675..3947 | - | 273 | Protein_2 | IS6 family transposase IS15DI | Transposase |
| NFJ01_RS21845 (NFJ01_21845) | 4013..4510 | + | 498 | Protein_3 | Tn3 family transposase ISEc63 | Transposase |
| NFJ01_RS21850 (NFJ01_21850) | 4771..5013 | + | 243 | WP_000844627.1 | transposase | - |
| NFJ01_RS21855 (NFJ01_21855) | 5045..5695 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NFJ01_RS21860 (NFJ01_21860) | 5801..7000 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| NFJ01_RS21865 (NFJ01_21865) | 6967..7155 | - | 189 | Protein_7 | IS91 family transposase | - |
| NFJ01_RS21870 (NFJ01_21870) | 7267..7572 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| NFJ01_RS21875 (NFJ01_21875) | 7600..8814 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| NFJ01_RS21880 (NFJ01_21880) | 9130..9834 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NFJ01_RS21885 (NFJ01_21885) | 9899..11401 | + | 1503 | Protein_11 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| NFJ01_RS21890 (NFJ01_21890) | 11456..11725 | + | 270 | WP_077784124.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NFJ01_RS21895 (NFJ01_21895) | 11760..12590 | - | 831 | Protein_13 | IS3 family transposase ISSen4 | Transposase |
| NFJ01_RS21900 (NFJ01_21900) | 13251..13334 | + | 84 | Protein_14 | SOS response-associated peptidase | - |
| NFJ01_RS21905 (NFJ01_21905) | 13392..14360 | - | 969 | WP_000654802.1 | IS5 family transposase IS903B | Transposase |
| NFJ01_RS21910 (NFJ01_21910) | 14941..15327 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| NFJ01_RS21915 (NFJ01_21915) | 15467..16435 | - | 969 | WP_020956880.1 | IS5 family transposase IS903B | Transposase |
| NFJ01_RS21920 (NFJ01_21920) | 17542..17850 | - | 309 | Protein_18 | replication initiation protein | - |
| NFJ01_RS21930 (NFJ01_21930) | 18709..20196 | - | 1488 | WP_023300763.1 | group II intron reverse transcriptase/maturase | - |
| NFJ01_RS21935 (NFJ01_21935) | 20602..21033 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NFJ01_RS21940 (NFJ01_21940) | 21033..22304 | + | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| NFJ01_RS21945 (NFJ01_21945) | 22386..23360 | - | 975 | WP_000064120.1 | ParB family protein | - |
| NFJ01_RS21950 (NFJ01_21950) | 23360..24565 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| NFJ01_RS21955 (NFJ01_21955) | 24980..25249 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| NFJ01_RS21960 (NFJ01_21960) | 25426..26292 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| NFJ01_RS21965 (NFJ01_21965) | 26822..26926 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| NFJ01_RS21970 (NFJ01_21970) | 27055..27312 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| NFJ01_RS21975 (NFJ01_21975) | 27370..28146 | - | 777 | WP_020956881.1 | tyrosine-type recombinase/integrase | - |
| NFJ01_RS21980 (NFJ01_21980) | 28158..28844 | - | 687 | WP_020956882.1 | hypothetical protein | - |
| NFJ01_RS21985 (NFJ01_21985) | 28908..29201 | - | 294 | WP_020956883.1 | hypothetical protein | - |
| NFJ01_RS21990 (NFJ01_21990) | 29790..30020 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NFJ01_RS21995 (NFJ01_21995) | 30017..30433 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NFJ01_RS22000 (NFJ01_22000) | 30514..31218 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NFJ01_RS22005 (NFJ01_22005) | 31247..32452 | - | 1206 | Protein_35 | chromate efflux transporter | - |
| NFJ01_RS22010 (NFJ01_22010) | 32677..33381 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NFJ01_RS22015 (NFJ01_22015) | 33435..34904 | - | 1470 | Protein_37 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| NFJ01_RS22020 (NFJ01_22020) | 34907..35467 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| NFJ01_RS22025 (NFJ01_22025) | 35889..37460 | + | 1572 | WP_039026336.1 | putative ABC transporter ATP-binding protein YheS | VF |
| NFJ01_RS22030 (NFJ01_22030) | 37540..37617 | + | 78 | Protein_40 | hypothetical protein | - |
| NFJ01_RS22035 (NFJ01_22035) | 37582..37854 | - | 273 | Protein_41 | plasmid pRiA4b ORF-3 family protein | - |
| NFJ01_RS22040 (NFJ01_22040) | 37990..38172 | - | 183 | Protein_42 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| NFJ01_RS22045 (NFJ01_22045) | 38334..38948 | + | 615 | WP_014839983.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NFJ01_RS22050 (NFJ01_22050) | 39267..39923 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| NFJ01_RS22055 (NFJ01_22055) | 40428..41132 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NFJ01_RS22060 (NFJ01_22060) | 41197..41376 | - | 180 | Protein_46 | helix-turn-helix domain-containing protein | - |
| NFJ01_RS22065 (NFJ01_22065) | 41724..42560 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| NFJ01_RS22070 (NFJ01_22070) | 42560..43363 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NFJ01_RS22075 (NFJ01_22075) | 43424..44239 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| NFJ01_RS22080 (NFJ01_22080) | 44401..45261 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NFJ01_RS22085 (NFJ01_22085) | 45444..46001 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NFJ01_RS22090 (NFJ01_22090) | 46165..46305 | + | 141 | WP_020219413.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NFJ01_RS22095 (NFJ01_22095) | 46317..47021 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NFJ01_RS22100 (NFJ01_22100) | 47076..47279 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| NFJ01_RS22105 (NFJ01_22105) | 47407..48246 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| NFJ01_RS22110 (NFJ01_22110) | 48240..48587 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| NFJ01_RS22115 (NFJ01_22115) | 48704..49542 | - | 839 | Protein_57 | Streptomycin 3''-adenylyltransferase | ARG |
| NFJ01_RS22120 (NFJ01_22120) | 49548..49838 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| NFJ01_RS22125 (NFJ01_22125) | 49950..50447 | - | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| NFJ01_RS22130 (NFJ01_22130) | 50592..51605 | + | 1014 | WP_252688672.1 | IS91 family transposase ISAzo26 | Transposase |
| NFJ01_RS22135 (NFJ01_22135) | 51808..52158 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| NFJ01_RS22140 (NFJ01_22140) | 52334..52894 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NFJ01_RS22145 (NFJ01_22145) | 52898..55864 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NFJ01_RS22150 (NFJ01_22150) | 55898..56170 | - | 273 | Protein_64 | IS6 family transposase IS15DI | Transposase |
| NFJ01_RS22155 (NFJ01_22155) | 56236..56733 | + | 498 | Protein_65 | Tn3 family transposase ISEc63 | Transposase |
| NFJ01_RS22160 (NFJ01_22160) | 56994..57236 | + | 243 | WP_000844627.1 | transposase | - |
| NFJ01_RS22165 (NFJ01_22165) | 57268..57918 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NFJ01_RS22170 (NFJ01_22170) | 58024..59223 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| NFJ01_RS22175 (NFJ01_22175) | 59190..59378 | - | 189 | Protein_69 | IS91 family transposase | - |
| NFJ01_RS22180 (NFJ01_22180) | 59490..59795 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| NFJ01_RS22185 (NFJ01_22185) | 59823..61037 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| NFJ01_RS22190 (NFJ01_22190) | 61353..62057 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NFJ01_RS22195 (NFJ01_22195) | 62122..63624 | + | 1503 | Protein_73 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| NFJ01_RS22200 (NFJ01_22200) | 63679..63948 | + | 270 | WP_077784124.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NFJ01_RS22205 (NFJ01_22205) | 63983..64813 | - | 831 | Protein_75 | IS3 family transposase ISSen4 | Transposase |
| NFJ01_RS22210 (NFJ01_22210) | 65474..65557 | + | 84 | Protein_76 | SOS response-associated peptidase | - |
| NFJ01_RS22215 (NFJ01_22215) | 65615..66582 | - | 968 | Protein_77 | IS5 family transposase IS903B | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|