MGE detailed information
MGE type: Prophage MGE length: 21922 bp
Accession: NZ_CP099397 Location: 4235191..4257112 Organism: Pseudomonas hydrolytica strain DSWY01 Replicon: chromosome
Accession: NZ_CP099397 Location: 4235191..4257112 Organism: Pseudomonas hydrolytica strain DSWY01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1F06_RS19840 (L1F06_019840) | 4232145..4235123 | - | 2979 | WP_046720602.1 | type I restriction endonuclease subunit R | - |
| L1F06_RS19845 (L1F06_019845) | 4235191..4235400 | - | 210 | WP_023109365.1 | helix-turn-helix domain-containing protein | - |
| L1F06_RS19850 (L1F06_019850) | 4236010..4236747 | - | 738 | WP_023109366.1 | hypothetical protein | - |
| L1F06_RS19855 (L1F06_019855) | 4236877..4238451 | + | 1575 | WP_046720603.1 | Lon protease | VF |
| L1F06_RS19860 (L1F06_019860) | 4238458..4238727 | - | 270 | WP_046720604.1 | hypothetical protein | - |
| L1F06_RS19865 (L1F06_019865) | 4238724..4239191 | - | 468 | WP_233787626.1 | putative molybdenum carrier protein | - |
| L1F06_RS19870 (L1F06_019870) | 4239188..4239604 | - | 417 | WP_046720605.1 | hypothetical protein | - |
| L1F06_RS19875 (L1F06_019875) | 4239601..4240245 | - | 645 | WP_046720606.1 | hypothetical protein | - |
| L1F06_RS19880 (L1F06_019880) | 4240263..4240919 | - | 657 | WP_046720607.1 | hypothetical protein | - |
| L1F06_RS19885 (L1F06_019885) | 4241064..4241303 | + | 240 | WP_011806687.1 | helix-turn-helix transcriptional regulator | - |
| L1F06_RS19890 (L1F06_019890) | 4241768..4242790 | - | 1023 | WP_023109374.1 | replication protein RepA | - |
| L1F06_RS19895 (L1F06_019895) | 4242829..4243041 | - | 213 | WP_021264081.1 | AlpA family phage regulatory protein | - |
| L1F06_RS19900 (L1F06_019900) | 4243517..4244161 | + | 645 | WP_129481796.1 | MBL fold metallo-hydrolase | - |
| L1F06_RS19905 (L1F06_019905) | 4244685..4246529 | + | 1845 | WP_129481797.1 | NERD domain-containing protein | - |
| L1F06_RS19910 (L1F06_019910) | 4246541..4246870 | - | 330 | WP_129481798.1 | hypothetical protein | - |
| L1F06_RS19915 (L1F06_019915) | 4247337..4247609 | + | 273 | WP_115299392.1 | DNA-binding protein | - |
| L1F06_RS19920 (L1F06_019920) | 4247759..4248070 | + | 312 | WP_252576794.1 | DUF5447 family protein | - |
| L1F06_RS19925 (L1F06_019925) | 4248075..4248392 | + | 318 | WP_177491018.1 | hypothetical protein | - |
| L1F06_RS19930 (L1F06_019930) | 4248645..4249394 | + | 750 | WP_252576688.1 | hypothetical protein | - |
| L1F06_RS19935 (L1F06_019935) | 4249400..4249759 | + | 360 | WP_129481800.1 | DUF2523 family protein | - |
| L1F06_RS19940 (L1F06_019940) | 4249762..4251087 | + | 1326 | WP_129481801.1 | hypothetical protein | VF |
| L1F06_RS19945 (L1F06_019945) | 4251000..4252058 | + | 1059 | Protein_3934 | hypothetical protein | - |
| L1F06_RS19950 (L1F06_019950) | 4252055..4253050 | + | 996 | WP_129481802.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L1F06_RS19955 (L1F06_019955) | 4253103..4253348 | + | 246 | WP_011921115.1 | Arc family DNA-binding protein | Antitoxin Detail |
| L1F06_RS19960 (L1F06_019960) | 4253345..4253764 | + | 420 | WP_129481803.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L1F06_RS19970 (L1F06_019970) | 4254159..4254386 | + | 228 | WP_003244658.1 | hypothetical protein | - |
| L1F06_RS19975 (L1F06_019975) | 4254383..4254736 | - | 354 | WP_129481804.1 | excalibur calcium-binding domain-containing protein | - |
| L1F06_RS19980 (L1F06_019980) | 4254875..4255039 | + | 165 | WP_096825672.1 | hypothetical protein | - |
| L1F06_RS19985 (L1F06_019985) | 4255066..4255512 | + | 447 | WP_129481805.1 | hypothetical protein | - |
| L1F06_RS19990 (L1F06_019990) | 4255521..4256099 | - | 579 | WP_003244654.1 | hypothetical protein | - |
| L1F06_RS19995 (L1F06_019995) | 4256201..4257112 | - | 912 | WP_011921109.1 | DMT family transporter | - |
| L1F06_RS20000 (L1F06_020000) | 4257449..4258156 | - | 708 | WP_129481806.1 | DNA/RNA nuclease SfsA | - |
| L1F06_RS20005 (L1F06_020005) | 4258146..4259327 | - | 1182 | WP_129481807.1 | pyridoxal phosphate-dependent aminotransferase | - |
| L1F06_RS20010 (L1F06_020010) | 4259585..4260031 | + | 447 | WP_003244648.1 | RNA polymerase-binding protein DksA | - |
| L1F06_RS20015 (L1F06_020015) | 4260082..4260966 | + | 885 | WP_129481808.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| L1F06_RS20020 (L1F06_020020) | 4261106..4261282 | + | 177 | WP_003244646.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|