MGE detailed information
MGE type: Prophage MGE length: 86018 bp
Accession: NZ_CP099389 Location: 2845197..2931214 Organism: Citrobacter braakii strain RHB02-E4-C01 Replicon: chromosome
Accession: NZ_CP099389 Location: 2845197..2931214 Organism: Citrobacter braakii strain RHB02-E4-C01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ24_RS13630 () | 2842055..2842936 | - | 882 | WP_003034964.1 | protease HtpX | - |
| NFJ24_RS13635 () | 2843129..2845177 | - | 2049 | WP_279266195.1 | carboxy terminal-processing peptidase | - |
| NFJ24_RS13640 () | 2845197..2845883 | - | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| NFJ24_RS13645 () | 2845980..2846477 | - | 498 | WP_235116710.1 | GAF domain-containing protein | - |
| NFJ24_RS13650 () | 2846606..2847889 | + | 1284 | WP_016152782.1 | membrane integrity lipid transport subunit YebS | - |
| NFJ24_RS13655 () | 2847858..2850491 | + | 2634 | WP_103847906.1 | Intermembrane transport protein YebT | VF |
| NFJ24_RS13660 () | 2850608..2851996 | + | 1389 | WP_233616908.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFJ24_RS13665 () | 2852097..2852333 | + | 237 | WP_029139506.1 | YebV family protein | - |
| NFJ24_RS13670 () | 2852436..2852627 | + | 192 | WP_016152779.1 | YebW family protein | - |
| NFJ24_RS13675 () | 2852628..2853269 | - | 642 | WP_141875078.1 | protein-serine/threonine phosphatase | - |
| NFJ24_RS13680 () | 2853360..2854190 | - | 831 | WP_103766187.1 | GIY-YIG nuclease family protein | - |
| - | 2854545..2854648 | - | 104 | - | - | Toxin Detail |
| - | 2854545..2854683 | + | 139 | - | - | Antitoxin Detail |
| NFJ24_RS13685 () | 2854804..2855142 | - | 339 | WP_003833793.1 | YebY family protein | - |
| NFJ24_RS13690 () | 2855163..2856035 | - | 873 | WP_049271209.1 | copper homeostasis membrane protein CopD | - |
| NFJ24_RS13695 () | 2856039..2856413 | - | 375 | WP_047415373.1 | CopC domain-containing protein YobA | - |
| NFJ24_RS13700 () | 2856557..2856787 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| NFJ24_RS13705 () | 2856894..2857550 | + | 657 | WP_047415371.1 | carbon-nitrogen hydrolase family protein | - |
| NFJ24_RS13710 () | 2857574..2858236 | + | 663 | WP_181220539.1 | exodeoxyribonuclease X | - |
| NFJ24_RS13715 () | 2858218..2860293 | - | 2076 | WP_181012487.1 | oligopeptidase B | - |
| NFJ24_RS13720 () | 2860380..2861039 | - | 660 | WP_016156220.1 | tellurite resistance TerB family protein | - |
| NFJ24_RS13725 () | 2861141..2861494 | - | 354 | WP_103766151.1 | protein YebF | - |
| NFJ24_RS13730 () | 2861616..2861906 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| NFJ24_RS13735 () | 2862039..2863217 | + | 1179 | WP_235116708.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFJ24_RS13740 () | 2863284..2863925 | - | 642 | WP_016152768.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFJ24_RS13745 () | 2863960..2865771 | - | 1812 | WP_047358576.1 | phosphogluconate dehydratase | - |
| NFJ24_RS13750 () | 2866004..2867479 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| NFJ24_RS13755 () | 2867848..2868717 | + | 870 | WP_019076523.1 | MurR/RpiR family transcriptional regulator | - |
| NFJ24_RS13760 () | 2868836..2870278 | + | 1443 | WP_016152765.1 | pyruvate kinase | - |
| NFJ24_RS13765 () | 2870324..2871295 | - | 972 | WP_185654377.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NFJ24_RS13770 () | 2871415..2872734 | - | 1320 | WP_016152763.1 | murein DD-endopeptidase MepM | - |
| NFJ24_RS13775 () | 2872750..2873694 | - | 945 | WP_019076521.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NFJ24_RS13780 () | 2873773..2874528 | + | 756 | WP_235116707.1 | Zinc import ATP-binding protein ZnuC | VF |
| NFJ24_RS13785 () | 2874525..2875310 | + | 786 | WP_103766149.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NFJ24_RS13790 () | 2875602..2875865 | + | 264 | Protein_2707 | SOS response-associated peptidase family protein | - |
| NFJ24_RS13795 () | 2876228..2877154 | - | 927 | WP_047054289.1 | HTH-type transcriptional regulator YjiE | VF |
| NFJ24_RS13800 () | 2877337..2878500 | + | 1164 | WP_004202520.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| NFJ24_RS13805 () | 2878577..2879422 | + | 846 | WP_047054293.1 | fumarylacetoacetate hydrolase family protein | - |
| NFJ24_RS13810 () | 2879508..2880851 | + | 1344 | WP_047054294.1 | MFS transporter | - |
| NFJ24_RS13815 () | 2881469..2881564 | + | 96 | Protein_2712 | SOS response-associated peptidase | - |
| NFJ24_RS13820 () | 2881679..2883220 | - | 1542 | WP_153647147.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| NFJ24_RS13825 () | 2883508..2883612 | + | 105 | Protein_2714 | DinI family protein | - |
| NFJ24_RS13830 () | 2883657..2884244 | - | 588 | WP_065554943.1 | DUF4376 domain-containing protein | - |
| NFJ24_RS13835 () | 2884256..2886244 | - | 1989 | WP_279266196.1 | ISNCY family transposase KIS | Transposase |
| NFJ24_RS13840 () | 2886313..2889693 | - | 3381 | WP_279266197.1 | host specificity protein J | - |
| NFJ24_RS13845 () | 2889765..2890442 | - | 678 | WP_279266198.1 | tail assembly protein | - |
| NFJ24_RS13850 () | 2890340..2891074 | - | 735 | WP_279266199.1 | C40 family peptidase | - |
| NFJ24_RS13855 () | 2891086..2891781 | - | 696 | WP_016152743.1 | phage minor tail protein L | - |
| NFJ24_RS13860 () | 2891790..2892089 | - | 300 | WP_049268767.1 | phage tail protein | - |
| NFJ24_RS13865 () | 2892123..2895425 | - | 3303 | WP_137366890.1 | phage tail tape measure protein | - |
| NFJ24_RS13870 () | 2895676..2896038 | - | 363 | WP_075847155.1 | phage tail protein | - |
| NFJ24_RS13875 () | 2896101..2896583 | - | 483 | WP_003832379.1 | hypothetical protein | - |
| NFJ24_RS13880 () | 2896617..2897018 | - | 402 | WP_101699948.1 | HK97 gp10 family phage protein | - |
| NFJ24_RS13885 () | 2897015..2897404 | - | 390 | WP_016152738.1 | hypothetical protein | - |
| NFJ24_RS13890 () | 2897373..2897723 | - | 351 | WP_181230514.1 | head-tail adaptor protein | - |
| NFJ24_RS13895 () | 2897720..2898037 | - | 318 | WP_032950890.1 | head-tail connector protein | - |
| NFJ24_RS13900 () | 2898018..2898395 | - | 378 | WP_279266200.1 | hypothetical protein | - |
| NFJ24_RS13905 () | 2898493..2899779 | - | 1287 | WP_279266201.1 | phage major capsid protein | - |
| NFJ24_RS13910 () | 2899852..2900772 | - | 921 | WP_279266202.1 | S49 family peptidase | - |
| NFJ24_RS13915 () | 2900809..2902068 | - | 1260 | WP_003832365.1 | phage portal protein | - |
| NFJ24_RS13920 () | 2902068..2902247 | - | 180 | WP_101699942.1 | hypothetical protein | - |
| NFJ24_RS13925 () | 2902241..2903968 | - | 1728 | WP_016150031.1 | terminase large subunit | - |
| NFJ24_RS13930 () | 2903965..2904462 | - | 498 | WP_049268774.1 | phage terminase small subunit P27 family | - |
| NFJ24_RS13935 () | 2904780..2905142 | - | 363 | WP_279266203.1 | HNH endonuclease signature motif containing protein | - |
| NFJ24_RS13940 () | 2905418..2905957 | + | 540 | WP_279266204.1 | cytochrome b | - |
| NFJ24_RS13945 () | 2905967..2906221 | - | 255 | WP_074422899.1 | hypothetical protein | - |
| NFJ24_RS13950 () | 2906610..2907038 | - | 429 | WP_065554947.1 | hypothetical protein | - |
| NFJ24_RS13955 () | 2907161..2907520 | + | 360 | WP_137352520.1 | hypothetical protein | - |
| NFJ24_RS13960 () | 2907530..2908033 | - | 504 | WP_087050957.1 | hypothetical protein | - |
| NFJ24_RS13965 () | 2908057..2908605 | - | 549 | WP_075847143.1 | lysozyme | - |
| NFJ24_RS13970 () | 2908577..2908855 | - | 279 | WP_003832349.1 | phage holin | - |
| NFJ24_RS13975 () | 2909114..2909407 | + | 294 | WP_048233519.1 | hypothetical protein | - |
| NFJ24_RS13980 () | 2909544..2909651 | - | 108 | Protein_2745 | putative holin | - |
| NFJ24_RS13985 () | 2909744..2909932 | - | 189 | WP_049268779.1 | hypothetical protein | - |
| NFJ24_RS13990 () | 2910076..2910450 | + | 375 | WP_016152722.1 | FlxA-like family protein | - |
| NFJ24_RS13995 () | 2910768..2911367 | - | 600 | WP_181230517.1 | hypothetical protein | - |
| NFJ24_RS14000 () | 2911381..2912421 | - | 1041 | WP_279266205.1 | DUF968 domain-containing protein | - |
| NFJ24_RS14005 () | 2912418..2912777 | - | 360 | WP_048235607.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NFJ24_RS14010 () | 2912780..2912980 | - | 201 | WP_048235144.1 | hypothetical protein | - |
| NFJ24_RS14015 () | 2913308..2915305 | - | 1998 | WP_153879778.1 | SIR2 family protein | - |
| NFJ24_RS14020 () | 2915295..2915570 | - | 276 | WP_071667585.1 | hypothetical protein | - |
| NFJ24_RS14025 () | 2915616..2915849 | - | 234 | WP_044700595.1 | DinI family protein | - |
| NFJ24_RS14030 () | 2916136..2917227 | - | 1092 | WP_044711228.1 | permease | - |
| NFJ24_RS14035 () | 2917328..2917624 | + | 297 | WP_038641364.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NFJ24_RS14040 () | 2917692..2918117 | - | 426 | WP_038641366.1 | glutaredoxin-dependent arsenate reductase | - |
| NFJ24_RS14045 () | 2918130..2919419 | - | 1290 | WP_044711231.1 | arsenite efflux transporter membrane subunit ArsB | - |
| NFJ24_RS14050 () | 2919467..2921218 | - | 1752 | WP_048235610.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| NFJ24_RS14055 () | 2921236..2921598 | - | 363 | WP_044711234.1 | arsenite efflux transporter metallochaperone ArsD | - |
| NFJ24_RS14060 () | 2921645..2921998 | - | 354 | WP_044711237.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| NFJ24_RS14065 () | 2922122..2922667 | - | 546 | WP_135912879.1 | replication protein P | - |
| NFJ24_RS14070 () | 2922579..2923490 | - | 912 | WP_279266206.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| NFJ24_RS14075 () | 2923743..2924297 | - | 555 | WP_279266207.1 | toxin YdaT family protein | - |
| NFJ24_RS14080 () | 2924300..2924515 | - | 216 | WP_032949519.1 | Cro/CI family transcriptional regulator | - |
| NFJ24_RS14085 () | 2924617..2925006 | + | 390 | WP_032949520.1 | helix-turn-helix domain-containing protein | - |
| NFJ24_RS14090 () | 2925235..2925450 | + | 216 | WP_048235613.1 | hypothetical protein | - |
| NFJ24_RS14095 () | 2925612..2925950 | + | 339 | WP_135912188.1 | hypothetical protein | - |
| NFJ24_RS14100 () | 2925962..2926288 | + | 327 | WP_032944383.1 | Rrf2 family transcriptional regulator | - |
| NFJ24_RS14105 () | 2926355..2928901 | + | 2547 | WP_279266208.1 | exonuclease | - |
| NFJ24_RS14110 () | 2928968..2929183 | + | 216 | WP_032943036.1 | excisionase family protein | - |
| NFJ24_RS14115 () | 2929183..2930469 | + | 1287 | WP_044700610.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NFJ24_RS14120 () | 2930543..2931214 | + | 672 | WP_046274776.1 | Transcriptional regulatory protein PhoP | VF |
| NFJ24_RS14125 () | 2931214..2932677 | + | 1464 | WP_047501987.1 | two-component system sensor histidine kinase PhoQ | - |
| NFJ24_RS14130 () | 2932770..2933891 | + | 1122 | WP_235116409.1 | cupin domain-containing protein | - |
| NFJ24_RS14135 () | 2933996..2935222 | - | 1227 | WP_279266209.1 | peptidase T | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|