MGE detailed information
MGE type: Prophage MGE length: 85871 bp
Accession: NZ_CP099387 Location: 2845186..2931056 Organism: Citrobacter braakii strain RHB08-E3-C01 Replicon: chromosome
Accession: NZ_CP099387 Location: 2845186..2931056 Organism: Citrobacter braakii strain RHB08-E3-C01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ49_RS13810 () | 2842044..2842925 | - | 882 | WP_003034964.1 | protease HtpX | - |
| NFJ49_RS13815 () | 2843118..2845166 | - | 2049 | WP_046276431.1 | carboxy terminal-processing peptidase | - |
| NFJ49_RS13820 () | 2845186..2845872 | - | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| NFJ49_RS13825 () | 2845969..2846466 | - | 498 | WP_016152783.1 | GAF domain-containing protein | - |
| NFJ49_RS13830 () | 2846595..2847878 | + | 1284 | WP_279272984.1 | membrane integrity lipid transport subunit YebS | - |
| NFJ49_RS13835 () | 2847847..2850480 | + | 2634 | WP_019076590.1 | Intermembrane transport protein YebT | VF |
| NFJ49_RS13840 () | 2850597..2851985 | + | 1389 | WP_047358619.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFJ49_RS13845 () | 2852086..2852322 | + | 237 | WP_029139506.1 | YebV family protein | - |
| NFJ49_RS13850 () | 2852425..2852616 | + | 192 | WP_016152779.1 | YebW family protein | - |
| NFJ49_RS13855 () | 2852617..2853258 | - | 642 | WP_016156284.1 | protein-serine/threonine phosphatase | - |
| NFJ49_RS13860 () | 2853336..2854616 | - | 1281 | WP_149380983.1 | hypothetical protein | - |
| - | 2854934..2855077 | + | 144 | - | - | Antitoxin Detail |
| - | 2854939..2855042 | - | 104 | - | - | Toxin Detail |
| NFJ49_RS13865 () | 2855198..2855536 | - | 339 | WP_003833793.1 | YebY family protein | - |
| NFJ49_RS13870 () | 2855557..2856429 | - | 873 | WP_075847179.1 | copper homeostasis membrane protein CopD | - |
| NFJ49_RS13875 () | 2856433..2856807 | - | 375 | WP_137381108.1 | CopC domain-containing protein YobA | - |
| NFJ49_RS13880 () | 2856951..2857181 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| NFJ49_RS13885 () | 2857288..2857944 | + | 657 | WP_047415371.1 | carbon-nitrogen hydrolase family protein | - |
| NFJ49_RS13890 () | 2857968..2858630 | + | 663 | WP_016152773.1 | exodeoxyribonuclease X | - |
| NFJ49_RS13895 () | 2858612..2860687 | - | 2076 | WP_279272985.1 | oligopeptidase B | - |
| NFJ49_RS13900 () | 2860774..2861433 | - | 660 | WP_016156220.1 | tellurite resistance TerB family protein | - |
| NFJ49_RS13905 () | 2861535..2861888 | - | 354 | WP_016152770.1 | protein YebF | - |
| NFJ49_RS13910 () | 2862010..2862300 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| NFJ49_RS13915 () | 2862433..2863611 | + | 1179 | WP_279272986.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFJ49_RS13920 () | 2863678..2864319 | - | 642 | WP_279272987.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFJ49_RS13925 () | 2864354..2866165 | - | 1812 | WP_049271196.1 | phosphogluconate dehydratase | - |
| NFJ49_RS13930 () | 2866398..2867873 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| NFJ49_RS13935 () | 2868242..2869111 | + | 870 | WP_019076523.1 | MurR/RpiR family transcriptional regulator | - |
| NFJ49_RS13940 () | 2869230..2870672 | + | 1443 | WP_016152765.1 | pyruvate kinase | - |
| NFJ49_RS13945 () | 2870718..2871689 | - | 972 | WP_047501988.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NFJ49_RS13950 () | 2871809..2873128 | - | 1320 | WP_016152763.1 | murein DD-endopeptidase MepM | - |
| NFJ49_RS13955 () | 2873144..2874088 | - | 945 | WP_019076521.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NFJ49_RS13960 () | 2874167..2874922 | + | 756 | WP_016152761.1 | Zinc import ATP-binding protein ZnuC | VF |
| NFJ49_RS13965 () | 2874919..2875704 | + | 786 | WP_016152760.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NFJ49_RS13970 () | 2875996..2876259 | + | 264 | Protein_2743 | SOS response-associated peptidase family protein | - |
| NFJ49_RS13975 () | 2877057..2877416 | + | 360 | WP_279272988.1 | hypothetical protein | - |
| NFJ49_RS13980 () | 2877445..2878899 | + | 1455 | WP_279272989.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| NFJ49_RS13985 () | 2879122..2880015 | - | 894 | WP_279272990.1 | hypothetical protein | - |
| NFJ49_RS13990 () | 2880509..2880604 | + | 96 | Protein_2747 | SOS response-associated peptidase | - |
| NFJ49_RS13995 () | 2880719..2882260 | - | 1542 | WP_153647147.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| NFJ49_RS14000 () | 2882548..2882687 | + | 140 | Protein_2749 | DinI-like family protein | - |
| NFJ49_RS14005 () | 2882815..2882943 | - | 129 | Protein_2750 | helix-turn-helix domain-containing protein | - |
| NFJ49_RS14010 () | 2883004..2883087 | + | 84 | WP_232585360.1 | tail fiber assembly protein | - |
| NFJ49_RS14015 () | 2883059..2883640 | - | 582 | WP_016152747.1 | tail fiber assembly protein | - |
| NFJ49_RS14020 () | 2883640..2886387 | - | 2748 | WP_088583153.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NFJ49_RS14025 () | 2886456..2889836 | - | 3381 | WP_016152745.1 | host specificity protein J | - |
| NFJ49_RS14030 () | 2889908..2890585 | - | 678 | WP_049268765.1 | tail assembly protein | - |
| NFJ49_RS14035 () | 2890483..2891217 | - | 735 | WP_016152744.1 | C40 family peptidase | - |
| NFJ49_RS14040 () | 2891229..2891924 | - | 696 | WP_016152743.1 | phage minor tail protein L | - |
| NFJ49_RS14045 () | 2891933..2892232 | - | 300 | WP_049268767.1 | phage tail protein | - |
| NFJ49_RS14050 () | 2892266..2895568 | - | 3303 | WP_088583151.1 | phage tail tape measure protein | - |
| NFJ49_RS14055 () | 2895568..2895822 | - | 255 | WP_172860413.1 | hypothetical protein | - |
| NFJ49_RS14060 () | 2895819..2896181 | - | 363 | WP_088583150.1 | phage tail protein | - |
| NFJ49_RS14065 () | 2896244..2896726 | - | 483 | WP_003832379.1 | hypothetical protein | - |
| NFJ49_RS14070 () | 2896760..2897164 | - | 405 | WP_016152739.1 | HK97 gp10 family phage protein | - |
| NFJ49_RS14075 () | 2897161..2897550 | - | 390 | WP_016152738.1 | hypothetical protein | - |
| NFJ49_RS14080 () | 2897519..2897869 | - | 351 | WP_016152737.1 | phage head closure protein | - |
| NFJ49_RS14085 () | 2897866..2898183 | - | 318 | WP_016152736.1 | head-tail connector protein | - |
| NFJ49_RS14090 () | 2898164..2898541 | - | 378 | WP_016152735.1 | hypothetical protein | - |
| NFJ49_RS14095 () | 2898639..2899925 | - | 1287 | WP_016152734.1 | phage major capsid protein | - |
| NFJ49_RS14100 () | 2899998..2900918 | - | 921 | WP_016152733.1 | S49 family peptidase | - |
| NFJ49_RS14105 () | 2900955..2902214 | - | 1260 | WP_016152732.1 | phage portal protein | - |
| NFJ49_RS14110 () | 2902214..2902393 | - | 180 | WP_003832363.1 | hypothetical protein | - |
| NFJ49_RS14115 () | 2902387..2904114 | - | 1728 | WP_016152731.1 | terminase large subunit | - |
| NFJ49_RS14120 () | 2904111..2904608 | - | 498 | WP_016152730.1 | phage terminase small subunit P27 family | - |
| NFJ49_RS14125 () | 2904926..2905288 | - | 363 | WP_079224593.1 | HNH endonuclease signature motif containing protein | - |
| NFJ49_RS14130 () | 2905563..2906102 | + | 540 | WP_088583146.1 | cytochrome b | - |
| NFJ49_RS14135 () | 2906112..2906366 | - | 255 | WP_074422899.1 | hypothetical protein | - |
| NFJ49_RS14140 () | 2906755..2907183 | - | 429 | WP_279272991.1 | hypothetical protein | - |
| NFJ49_RS14145 () | 2907306..2907665 | + | 360 | WP_077249773.1 | hypothetical protein | - |
| NFJ49_RS14150 () | 2907675..2908178 | - | 504 | WP_087050957.1 | hypothetical protein | - |
| NFJ49_RS14155 () | 2908202..2908750 | - | 549 | WP_075847143.1 | lysozyme | - |
| NFJ49_RS14160 () | 2908722..2909000 | - | 279 | WP_003832349.1 | phage holin | - |
| NFJ49_RS14165 () | 2909259..2909552 | + | 294 | WP_048233519.1 | hypothetical protein | - |
| NFJ49_RS14170 () | 2909689..2909796 | - | 108 | Protein_2783 | putative holin | - |
| NFJ49_RS14175 () | 2909889..2910077 | - | 189 | WP_049268779.1 | hypothetical protein | - |
| NFJ49_RS14180 () | 2910221..2910595 | + | 375 | WP_165755494.1 | FlxA-like family protein | - |
| NFJ49_RS14185 () | 2911327..2911962 | - | 636 | WP_279272992.1 | hypothetical protein | - |
| NFJ49_RS14190 () | 2911976..2913016 | - | 1041 | WP_049268780.1 | DUF968 domain-containing protein | - |
| NFJ49_RS14195 () | 2913013..2913372 | - | 360 | WP_049268781.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NFJ49_RS14200 () | 2913375..2913575 | - | 201 | WP_003832333.1 | hypothetical protein | - |
| NFJ49_RS14205 () | 2913704..2913949 | - | 246 | WP_049268782.1 | hypothetical protein | - |
| NFJ49_RS14210 () | 2913995..2914228 | - | 234 | WP_044700595.1 | DinI family protein | - |
| NFJ49_RS14215 () | 2914515..2915606 | - | 1092 | WP_044711228.1 | permease | - |
| NFJ49_RS14220 () | 2915707..2916003 | + | 297 | WP_038641364.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NFJ49_RS14225 () | 2916071..2916496 | - | 426 | WP_038641366.1 | glutaredoxin-dependent arsenate reductase | - |
| NFJ49_RS14230 () | 2916509..2917798 | - | 1290 | WP_044711231.1 | arsenite efflux transporter membrane subunit ArsB | - |
| NFJ49_RS14235 () | 2917846..2919597 | - | 1752 | WP_048235610.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| NFJ49_RS14240 () | 2919615..2919977 | - | 363 | WP_044711234.1 | arsenite efflux transporter metallochaperone ArsD | - |
| NFJ49_RS14245 () | 2920024..2920377 | - | 354 | WP_044711237.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| NFJ49_RS14250 () | 2920501..2921046 | - | 546 | WP_135912879.1 | replication protein P | - |
| NFJ49_RS14255 () | 2920958..2921869 | - | 912 | WP_048236453.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| NFJ49_RS14260 () | 2922122..2922676 | - | 555 | WP_048235612.1 | toxin YdaT family protein | - |
| NFJ49_RS14265 () | 2922679..2922894 | - | 216 | WP_032949519.1 | Cro/CI family transcriptional regulator | - |
| NFJ49_RS14270 () | 2922996..2923385 | + | 390 | WP_032949520.1 | helix-turn-helix domain-containing protein | - |
| NFJ49_RS14275 () | 2923614..2923829 | + | 216 | WP_048235613.1 | hypothetical protein | - |
| NFJ49_RS14280 () | 2923991..2924329 | + | 339 | WP_135912188.1 | hypothetical protein | - |
| NFJ49_RS14285 () | 2924326..2924667 | + | 342 | WP_234610505.1 | Rrf2 family transcriptional regulator | - |
| NFJ49_RS14290 () | 2924809..2927280 | + | 2472 | WP_213351098.1 | exonuclease | - |
| NFJ49_RS14295 () | 2927347..2927562 | + | 216 | WP_032943036.1 | excisionase family protein | - |
| NFJ49_RS14300 () | 2927562..2928848 | + | 1287 | WP_279273691.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NFJ49_RS14305 () | 2928922..2929593 | + | 672 | WP_003846709.1 | Transcriptional regulatory protein PhoP | VF |
| NFJ49_RS14310 () | 2929593..2931056 | + | 1464 | WP_047359313.1 | two-component system sensor histidine kinase PhoQ | - |
| NFJ49_RS14315 () | 2931149..2932270 | + | 1122 | WP_016152697.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| NFJ49_RS14320 () | 2932375..2933601 | - | 1227 | WP_080858658.1 | peptidase T | - |
| NFJ49_RS14325 () | 2933852..2934988 | + | 1137 | WP_016152695.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| NFJ49_RS14330 () | 2934972..2935835 | + | 864 | WP_016150058.1 | spermidine/putrescine ABC transporter permease PotB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|