MGE detailed information
MGE type: Prophage MGE length: 85078 bp
Accession: NZ_CP099374 Location: 2882724..2967801 Organism: Citrobacter braakii strain RHB25-SO-C06 Replicon: chromosome
Accession: NZ_CP099374 Location: 2882724..2967801 Organism: Citrobacter braakii strain RHB25-SO-C06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFK30_RS13910 () | 2878237..2878734 | - | 498 | WP_016152783.1 | GAF domain-containing protein | - |
| NFK30_RS13915 () | 2878863..2880146 | + | 1284 | WP_016152782.1 | membrane integrity lipid transport subunit YebS | - |
| NFK30_RS13920 () | 2880115..2882748 | + | 2634 | WP_109018315.1 | PqiB family protein | - |
| NFK30_RS13925 () | 2882865..2884253 | + | 1389 | WP_223870134.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFK30_RS13930 () | 2884354..2884590 | + | 237 | WP_029139506.1 | YebV family protein | - |
| NFK30_RS13935 () | 2884693..2884884 | + | 192 | WP_016152779.1 | YebW family protein | - |
| NFK30_RS13940 () | 2884885..2885526 | - | 642 | WP_047358581.1 | protein-serine/threonine phosphatase | - |
| NFK30_RS13945 () | 2885604..2886884 | - | 1281 | WP_159137103.1 | hypothetical protein | - |
| - | 2887207..2887310 | - | 104 | - | - | Toxin Detail |
| - | 2887207..2887345 | + | 139 | - | - | Antitoxin Detail |
| NFK30_RS13950 () | 2887466..2887804 | - | 339 | WP_003833793.1 | YebY family protein | - |
| NFK30_RS13955 () | 2887825..2888697 | - | 873 | WP_109017734.1 | copper homeostasis membrane protein CopD | - |
| NFK30_RS13960 () | 2888701..2889075 | - | 375 | WP_109017733.1 | CopC domain-containing protein YobA | - |
| NFK30_RS13965 () | 2889219..2889449 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| NFK30_RS13970 () | 2889556..2890212 | + | 657 | WP_016156222.1 | carbon-nitrogen hydrolase family protein | - |
| NFK30_RS13975 () | 2890236..2890898 | + | 663 | WP_049040232.1 | exodeoxyribonuclease X | - |
| NFK30_RS13980 () | 2890880..2892978 | - | 2099 | Protein_2740 | oligopeptidase B | - |
| NFK30_RS13985 () | 2893041..2893700 | - | 660 | WP_016156220.1 | tellurite resistance TerB family protein | - |
| NFK30_RS13990 () | 2893801..2894154 | - | 354 | WP_016152770.1 | protein YebF | - |
| NFK30_RS13995 () | 2894276..2894566 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| NFK30_RS14000 () | 2894699..2895877 | + | 1179 | WP_016156219.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFK30_RS14005 () | 2895944..2896585 | - | 642 | WP_016152768.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFK30_RS14010 () | 2896620..2898431 | - | 1812 | WP_016152767.1 | phosphogluconate dehydratase | - |
| NFK30_RS14015 () | 2898664..2900139 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| NFK30_RS14020 () | 2900508..2901377 | + | 870 | WP_109017731.1 | MurR/RpiR family transcriptional regulator | - |
| NFK30_RS14025 () | 2901496..2902938 | + | 1443 | WP_016152765.1 | pyruvate kinase | - |
| NFK30_RS14030 () | 2902983..2903954 | - | 972 | WP_047501988.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NFK30_RS14035 () | 2904074..2905393 | - | 1320 | WP_016152763.1 | murein DD-endopeptidase MepM | - |
| NFK30_RS14040 () | 2905409..2906353 | - | 945 | WP_019076521.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NFK30_RS14045 () | 2906432..2907187 | + | 756 | WP_016152761.1 | Zinc import ATP-binding protein ZnuC | VF |
| NFK30_RS14050 () | 2907184..2907969 | + | 786 | WP_016152760.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NFK30_RS14055 () | 2908261..2908524 | + | 264 | Protein_2755 | SOS response-associated peptidase family protein | - |
| NFK30_RS14060 () | 2908863..2909258 | - | 396 | WP_016152759.1 | YdeI family stress tolerance OB fold protein | - |
| NFK30_RS14065 () | 2909399..2909902 | + | 504 | WP_016152758.1 | hypothetical protein | - |
| NFK30_RS14070 () | 2909912..2910358 | + | 447 | WP_075847167.1 | DUF421 domain-containing protein | - |
| NFK30_RS14075 () | 2910367..2910885 | + | 519 | WP_016152756.1 | 2-oxo-tetronate isomerase | - |
| NFK30_RS14080 () | 2910933..2911439 | - | 507 | WP_159137104.1 | ferritin-like domain-containing protein | - |
| NFK30_RS14085 () | 2911464..2911961 | - | 498 | WP_016152754.1 | ferritin-like domain-containing protein | - |
| NFK30_RS14090 () | 2912054..2912239 | - | 186 | WP_016152753.1 | general stress protein | - |
| NFK30_RS14095 () | 2912579..2913487 | + | 909 | WP_016152752.1 | putative oxidoreductase YghA | VF |
| NFK30_RS14100 () | 2913711..2913818 | + | 108 | WP_230330203.1 | hypothetical protein | - |
| NFK30_RS14105 () | 2913806..2914063 | + | 258 | WP_016152751.1 | hypothetical protein | - |
| NFK30_RS14110 () | 2914625..2914696 | + | 72 | Protein_2766 | SOS response-associated peptidase | - |
| NFK30_RS14115 () | 2914811..2916352 | - | 1542 | WP_153647147.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| NFK30_RS14120 () | 2916640..2916779 | + | 140 | Protein_2768 | DinI-like family protein | - |
| NFK30_RS14125 () | 2916907..2917035 | - | 129 | Protein_2769 | helix-turn-helix domain-containing protein | - |
| NFK30_RS14130 () | 2917096..2917179 | + | 84 | WP_232585360.1 | tail fiber assembly protein | - |
| NFK30_RS14135 () | 2917151..2917732 | - | 582 | WP_016152747.1 | tail fiber assembly protein | - |
| NFK30_RS14140 () | 2917732..2920479 | - | 2748 | WP_279274561.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NFK30_RS14145 () | 2920548..2923928 | - | 3381 | WP_016152745.1 | host specificity protein J | - |
| NFK30_RS14150 () | 2924000..2924677 | - | 678 | WP_049268765.1 | tail assembly protein | - |
| NFK30_RS14155 () | 2924575..2925309 | - | 735 | WP_016152744.1 | C40 family peptidase | - |
| NFK30_RS14160 () | 2925321..2926016 | - | 696 | WP_016152743.1 | phage minor tail protein L | - |
| NFK30_RS14165 () | 2926025..2926324 | - | 300 | WP_049268767.1 | phage tail protein | - |
| NFK30_RS14170 () | 2926358..2929660 | - | 3303 | WP_088583151.1 | phage tail tape measure protein | - |
| NFK30_RS14175 () | 2929660..2929914 | - | 255 | WP_172860413.1 | hypothetical protein | - |
| NFK30_RS14180 () | 2929911..2930273 | - | 363 | WP_088583150.1 | phage tail protein | - |
| NFK30_RS14185 () | 2930336..2930818 | - | 483 | WP_003832379.1 | hypothetical protein | - |
| NFK30_RS14190 () | 2930852..2931256 | - | 405 | WP_016152739.1 | HK97 gp10 family phage protein | - |
| NFK30_RS14195 () | 2931253..2931642 | - | 390 | WP_016152738.1 | hypothetical protein | - |
| NFK30_RS14200 () | 2931611..2931961 | - | 351 | WP_016152737.1 | phage head closure protein | - |
| NFK30_RS14205 () | 2931958..2932275 | - | 318 | WP_016152736.1 | head-tail connector protein | - |
| NFK30_RS14210 () | 2932256..2932633 | - | 378 | WP_016152735.1 | hypothetical protein | - |
| NFK30_RS14215 () | 2932731..2934017 | - | 1287 | WP_016152734.1 | phage major capsid protein | - |
| NFK30_RS14220 () | 2934090..2935010 | - | 921 | WP_016152733.1 | S49 family peptidase | - |
| NFK30_RS14225 () | 2935047..2936306 | - | 1260 | WP_016152732.1 | phage portal protein | - |
| NFK30_RS14230 () | 2936306..2936485 | - | 180 | WP_003832363.1 | hypothetical protein | - |
| NFK30_RS14235 () | 2936479..2938206 | - | 1728 | WP_016152731.1 | terminase large subunit | - |
| NFK30_RS14240 () | 2938203..2938700 | - | 498 | WP_016152730.1 | phage terminase small subunit P27 family | - |
| NFK30_RS14245 () | 2939018..2939380 | - | 363 | WP_080625039.1 | HNH endonuclease signature motif containing protein | - |
| NFK30_RS14250 () | 2939656..2940195 | + | 540 | WP_159137065.1 | cytochrome b | - |
| NFK30_RS14255 () | 2940205..2940459 | - | 255 | WP_074422899.1 | hypothetical protein | - |
| NFK30_RS14260 () | 2940848..2941276 | - | 429 | WP_140388655.1 | hypothetical protein | - |
| NFK30_RS14265 () | 2941399..2941758 | + | 360 | WP_077249773.1 | hypothetical protein | - |
| NFK30_RS14270 () | 2941768..2942271 | - | 504 | WP_087050957.1 | hypothetical protein | - |
| NFK30_RS14275 () | 2942295..2942843 | - | 549 | WP_075847143.1 | lysozyme | - |
| NFK30_RS14280 () | 2942815..2943093 | - | 279 | WP_003832349.1 | phage holin | - |
| NFK30_RS14290 () | 2944584..2944877 | + | 294 | WP_048233519.1 | hypothetical protein | - |
| NFK30_RS14295 () | 2945014..2945121 | - | 108 | Protein_2803 | putative holin | - |
| NFK30_RS14300 () | 2945214..2945402 | - | 189 | WP_049268779.1 | hypothetical protein | - |
| NFK30_RS14305 () | 2945546..2945920 | + | 375 | WP_016152722.1 | FlxA-like family protein | - |
| NFK30_RS14310 () | 2946238..2946837 | - | 600 | WP_159137064.1 | hypothetical protein | - |
| NFK30_RS14315 () | 2946834..2947193 | - | 360 | WP_159137063.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NFK30_RS14320 () | 2947186..2948679 | - | 1494 | WP_159137062.1 | DNA (cytosine-5-)-methyltransferase | - |
| NFK30_RS14325 () | 2948676..2948978 | - | 303 | WP_032947012.1 | Ref family recombination enhancement nuclease | - |
| NFK30_RS14330 () | 2949127..2949306 | - | 180 | WP_016150018.1 | hypothetical protein | - |
| NFK30_RS14335 () | 2949440..2949676 | - | 237 | WP_032947076.1 | DinI-like family protein | - |
| NFK30_RS14340 () | 2949857..2950057 | - | 201 | WP_050566831.1 | hypothetical protein | - |
| NFK30_RS14345 () | 2950178..2950345 | - | 168 | WP_223870088.1 | hypothetical protein | - |
| NFK30_RS14350 () | 2951132..2951560 | - | 429 | WP_159137061.1 | hypothetical protein | - |
| NFK30_RS14355 () | 2951560..2952018 | - | 459 | WP_050566836.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NFK30_RS14360 () | 2952011..2952259 | - | 249 | WP_016152713.1 | type II toxin-antitoxin system HicA family toxin | - |
| NFK30_RS14365 () | 2952544..2953017 | - | 474 | WP_016152712.1 | class I SAM-dependent methyltransferase | - |
| NFK30_RS14370 () | 2953017..2953253 | - | 237 | WP_016152711.1 | hypothetical protein | - |
| NFK30_RS14375 () | 2953250..2953912 | - | 663 | WP_016152710.1 | DUF1627 domain-containing protein | - |
| NFK30_RS14380 () | 2953934..2954941 | - | 1008 | WP_016152709.1 | hypothetical protein | - |
| NFK30_RS14385 () | 2954938..2955180 | - | 243 | WP_016152708.1 | DUF4222 domain-containing protein | - |
| NFK30_RS14390 () | 2955193..2955669 | - | 477 | WP_016152707.1 | toxin YdaT family protein | - |
| NFK30_RS14395 () | 2955669..2955908 | - | 240 | WP_016152706.1 | Cro/CI family transcriptional regulator | - |
| NFK30_RS14400 () | 2955989..2956399 | + | 411 | WP_016152705.1 | helix-turn-helix domain-containing protein | - |
| NFK30_RS14405 () | 2956820..2957233 | - | 414 | WP_016152703.1 | DUF1883 domain-containing protein | - |
| NFK30_RS14410 () | 2957374..2957568 | + | 195 | WP_016152702.1 | hypothetical protein | - |
| NFK30_RS14415 () | 2957561..2957746 | + | 186 | WP_087051046.1 | hypothetical protein | - |
| NFK30_RS14420 () | 2958044..2959876 | + | 1833 | WP_231390971.1 | hypothetical protein | - |
| NFK30_RS14425 () | 2960160..2960375 | + | 216 | WP_003832298.1 | excisionase family protein | - |
| NFK30_RS14430 () | 2960375..2961661 | + | 1287 | WP_016152699.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NFK30_RS14435 () | 2961735..2962406 | + | 672 | WP_046274776.1 | Transcriptional regulatory protein PhoP | VF |
| NFK30_RS14440 () | 2962406..2963869 | + | 1464 | WP_016152698.1 | two-component system sensor histidine kinase PhoQ | - |
| NFK30_RS14445 () | 2963962..2965083 | + | 1122 | WP_016152697.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| NFK30_RS14450 () | 2965188..2966414 | - | 1227 | WP_080858658.1 | peptidase T | - |
| NFK30_RS14455 () | 2966665..2967801 | + | 1137 | WP_016152695.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| NFK30_RS14460 () | 2967785..2968648 | + | 864 | WP_016150058.1 | spermidine/putrescine ABC transporter permease PotB | - |
| NFK30_RS14465 () | 2969151..2969327 | - | 177 | WP_213083733.1 | YnfU family zinc-binding protein | - |
| NFK30_RS14470 () | 2969481..2969714 | + | 234 | WP_029139493.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|