MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84106 bp
Accession: NZ_CP099371 Location: 1..84106 Organism: Citrobacter portucalensis strain RHB40-E3-C01 Replicon: plasmid unnamed1
Accession: NZ_CP099371 Location: 1..84106 Organism: Citrobacter portucalensis strain RHB40-E3-C01 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFK62_RS25115 (NFK62_25105) | 316..948 | - | 633 | WP_071444911.1 | hypothetical protein | - |
| NFK62_RS25120 (NFK62_25110) | 935..1384 | - | 450 | WP_071444912.1 | hypothetical protein | - |
| NFK62_RS25125 (NFK62_25115) | 1384..1698 | - | 315 | WP_071444913.1 | hypothetical protein | - |
| NFK62_RS25130 (NFK62_25120) | 1799..2440 | - | 642 | WP_126510771.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| NFK62_RS25135 (NFK62_25125) | 2574..3116 | + | 543 | WP_279276009.1 | hypothetical protein | - |
| NFK62_RS25140 (NFK62_25130) | 3120..3626 | + | 507 | WP_234105092.1 | tail fiber assembly protein | - |
| NFK62_RS25145 (NFK62_25135) | 4235..4570 | + | 336 | WP_151237047.1 | tail fiber assembly protein | - |
| NFK62_RS25150 (NFK62_25140) | 4868..5578 | + | 711 | WP_279276010.1 | hypothetical protein | - |
| NFK62_RS25155 (NFK62_25145) | 5669..6121 | + | 453 | WP_279276011.1 | tail fiber assembly protein | - |
| NFK62_RS25160 (NFK62_25150) | 6093..6632 | - | 540 | WP_234105095.1 | tail fiber assembly protein | - |
| NFK62_RS25165 (NFK62_25155) | 6636..9020 | - | 2385 | WP_279276012.1 | hypothetical protein | - |
| NFK62_RS25170 (NFK62_25160) | 9017..9475 | - | 459 | WP_234105124.1 | phage tail protein | - |
| NFK62_RS25175 (NFK62_25165) | 9548..10393 | - | 846 | WP_151237637.1 | phage tail protein | - |
| NFK62_RS25180 (NFK62_25170) | 10390..11829 | - | 1440 | WP_071444834.1 | baseplate protein | - |
| NFK62_RS25185 (NFK62_25175) | 11826..12206 | - | 381 | WP_071444835.1 | hypothetical protein | - |
| NFK62_RS25190 (NFK62_25180) | 12211..15999 | - | 3789 | WP_279276013.1 | hypothetical protein | - |
| NFK62_RS25195 (NFK62_25185) | 16117..16935 | - | 819 | WP_197385934.1 | hypothetical protein | - |
| NFK62_RS25200 (NFK62_25190) | 17368..18069 | - | 702 | WP_151237633.1 | phage tail protein | - |
| NFK62_RS25205 (NFK62_25195) | 18124..18675 | - | 552 | WP_197385933.1 | hypothetical protein | - |
| NFK62_RS25210 (NFK62_25200) | 18678..19169 | - | 492 | WP_197385932.1 | baseplate protein | - |
| NFK62_RS25215 (NFK62_25205) | 19249..19821 | - | 573 | WP_243457034.1 | hypothetical protein | - |
| NFK62_RS25220 (NFK62_25210) | 19892..20602 | - | 711 | WP_197385930.1 | hypothetical protein | - |
| NFK62_RS25225 (NFK62_25215) | 20613..22199 | - | 1587 | WP_197385929.1 | phage tail protein | - |
| NFK62_RS25230 (NFK62_25220) | 22245..23996 | - | 1752 | WP_071444844.1 | capsid protein | - |
| NFK62_RS25235 (NFK62_25225) | 24162..24563 | + | 402 | WP_071444845.1 | hypothetical protein | - |
| NFK62_RS25240 (NFK62_25230) | 24560..24751 | + | 192 | WP_071444846.1 | hypothetical protein | - |
| NFK62_RS25245 (NFK62_25235) | 24798..25034 | + | 237 | WP_071444847.1 | hypothetical protein | - |
| NFK62_RS25250 (NFK62_25240) | 25031..25432 | + | 402 | WP_240498901.1 | hypothetical protein | - |
| NFK62_RS25255 (NFK62_25245) | 25429..25641 | + | 213 | WP_151237627.1 | hypothetical protein | - |
| NFK62_RS25260 (NFK62_25250) | 25634..25912 | + | 279 | WP_151237625.1 | hypothetical protein | - |
| NFK62_RS25265 (NFK62_25255) | 25909..26544 | + | 636 | WP_151237623.1 | hypothetical protein | - |
| NFK62_RS25270 (NFK62_25260) | 26541..26894 | + | 354 | WP_071444851.1 | hypothetical protein | - |
| NFK62_RS25275 (NFK62_25265) | 26906..27499 | + | 594 | WP_151237621.1 | hypothetical protein | - |
| NFK62_RS25280 (NFK62_25270) | 27496..28200 | + | 705 | WP_071444853.1 | hypothetical protein | - |
| NFK62_RS25285 (NFK62_25275) | 28193..28465 | + | 273 | WP_071444854.1 | hypothetical protein | - |
| NFK62_RS25290 (NFK62_25280) | 28521..28865 | + | 345 | WP_126510707.1 | hypothetical protein | - |
| NFK62_RS25295 (NFK62_25285) | 28858..29451 | + | 594 | WP_279276014.1 | ead/Ea22-like family protein | - |
| NFK62_RS25300 (NFK62_25290) | 29453..29659 | + | 207 | WP_279276015.1 | hypothetical protein | - |
| NFK62_RS25305 (NFK62_25295) | 29656..29982 | + | 327 | WP_279276016.1 | hypothetical protein | - |
| NFK62_RS25310 (NFK62_25300) | 29979..30260 | + | 282 | WP_279276017.1 | hypothetical protein | - |
| NFK62_RS25315 (NFK62_25305) | 30260..31240 | + | 981 | WP_279276018.1 | hypothetical protein | - |
| NFK62_RS25320 (NFK62_25310) | 31466..31747 | + | 282 | WP_234105112.1 | ASCH domain-containing protein | - |
| NFK62_RS25325 (NFK62_25315) | 31750..32559 | + | 810 | WP_279276019.1 | HNH endonuclease | - |
| NFK62_RS25330 (NFK62_25320) | 32580..32942 | + | 363 | WP_279276020.1 | hypothetical protein | - |
| NFK62_RS25335 (NFK62_25325) | 32939..33235 | + | 297 | WP_279276021.1 | hypothetical protein | - |
| NFK62_RS25340 (NFK62_25330) | 33250..33636 | + | 387 | WP_126510724.1 | hypothetical protein | - |
| NFK62_RS25345 (NFK62_25335) | 33927..34235 | + | 309 | WP_279276022.1 | hypothetical protein | - |
| NFK62_RS25350 (NFK62_25340) | 35507..36379 | + | 873 | WP_071444869.1 | protein RepA | - |
| NFK62_RS25355 (NFK62_25345) | 36745..37251 | - | 507 | WP_279275999.1 | hypothetical protein | - |
| NFK62_RS25360 (NFK62_25350) | 37254..38036 | - | 783 | WP_220755896.1 | hypothetical protein | - |
| NFK62_RS25365 (NFK62_25355) | 38033..38317 | - | 285 | WP_071444871.1 | PAAR domain-containing protein | - |
| NFK62_RS25370 (NFK62_25360) | 38472..39098 | + | 627 | WP_126510731.1 | hypothetical protein | VF |
| NFK62_RS25375 (NFK62_25365) | 39095..39388 | + | 294 | WP_126510733.1 | hypothetical protein | - |
| NFK62_RS25380 (NFK62_25370) | 39600..41798 | - | 2199 | WP_243457033.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| NFK62_RS25385 (NFK62_25375) | 41788..42696 | - | 909 | WP_071444874.1 | recombination-associated protein RdgC | - |
| NFK62_RS25390 (NFK62_25380) | 42763..43419 | - | 657 | WP_240500703.1 | phage baseplate assembly protein V | - |
| NFK62_RS25395 (NFK62_25385) | 43412..44392 | - | 981 | WP_197385916.1 | tail length tape measure protein | - |
| NFK62_RS25400 (NFK62_25390) | 44395..45159 | - | 765 | WP_240498904.1 | baseplate | - |
| NFK62_RS25405 (NFK62_25395) | 45156..45929 | - | 774 | WP_279276000.1 | phage tail protein | - |
| NFK62_RS25410 (NFK62_25400) | 46071..46382 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NFK62_RS25415 (NFK62_25405) | 46379..46798 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NFK62_RS25420 (NFK62_25410) | 46835..48037 | - | 1203 | WP_071444878.1 | phage tail protein | - |
| NFK62_RS25425 (NFK62_25415) | 48030..48359 | - | 330 | WP_000121260.1 | hypothetical protein | - |
| NFK62_RS25430 (NFK62_25420) | 48356..49015 | - | 660 | WP_186805022.1 | maturation control protein | - |
| NFK62_RS25435 (NFK62_25425) | 49269..49406 | + | 138 | WP_165612481.1 | hypothetical protein | - |
| NFK62_RS25440 (NFK62_25430) | 49378..49608 | + | 231 | WP_071444879.1 | hypothetical protein | - |
| NFK62_RS25445 (NFK62_25435) | 49855..50493 | - | 639 | WP_071444881.1 | Ref family recombination enhancement nuclease | - |
| NFK62_RS25450 (NFK62_25440) | 50639..51079 | + | 441 | WP_071444882.1 | hypothetical protein | - |
| NFK62_RS25455 (NFK62_25445) | 51102..51593 | + | 492 | WP_071444883.1 | hypothetical protein | - |
| NFK62_RS25460 (NFK62_25450) | 52330..52761 | + | 432 | WP_071444884.1 | hypothetical protein | - |
| NFK62_RS25465 (NFK62_25455) | 52794..53468 | - | 675 | WP_126510745.1 | hypothetical protein | - |
| NFK62_RS25470 (NFK62_25460) | 53470..53940 | - | 471 | WP_071444886.1 | hypothetical protein | - |
| NFK62_RS25475 (NFK62_25465) | 53933..54415 | - | 483 | WP_071444887.1 | hypothetical protein | - |
| NFK62_RS25480 (NFK62_25470) | 54498..54950 | - | 453 | WP_071444888.1 | hypothetical protein | - |
| NFK62_RS25485 (NFK62_25475) | 54960..55280 | - | 321 | WP_081364652.1 | hypothetical protein | - |
| NFK62_RS25490 (NFK62_25480) | 55362..56387 | - | 1026 | WP_234105101.1 | tyrosine-type recombinase/integrase | - |
| NFK62_RS25495 (NFK62_25485) | 56944..57978 | + | 1035 | WP_071444890.1 | hypothetical protein | - |
| NFK62_RS25500 (NFK62_25490) | 58007..59518 | - | 1512 | WP_185812396.1 | terminase | - |
| NFK62_RS25505 (NFK62_25495) | 59518..60747 | - | 1230 | WP_071444891.1 | hypothetical protein | - |
| NFK62_RS25510 (NFK62_25500) | 61011..62090 | + | 1080 | WP_071444892.1 | ParM/StbA family protein | - |
| NFK62_RS25515 (NFK62_25505) | 62090..62581 | + | 492 | WP_071444893.1 | hypothetical protein | - |
| NFK62_RS25520 (NFK62_25510) | 62561..62971 | - | 411 | WP_071444894.1 | hypothetical protein | - |
| NFK62_RS25525 (NFK62_25515) | 63197..64498 | - | 1302 | WP_071444895.1 | DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein | - |
| NFK62_RS25530 (NFK62_25520) | 64907..65113 | - | 207 | WP_279276002.1 | hypothetical protein | - |
| NFK62_RS25535 (NFK62_25525) | 65203..65760 | - | 558 | WP_071444898.1 | VRR-NUC domain-containing protein | - |
| NFK62_RS25540 (NFK62_25530) | 65970..66137 | - | 168 | WP_165612480.1 | hypothetical protein | - |
| NFK62_RS25545 (NFK62_25535) | 66289..66558 | - | 270 | WP_071444899.1 | hypothetical protein | - |
| NFK62_RS25550 (NFK62_25540) | 66569..67006 | - | 438 | WP_151237590.1 | olxA | - |
| NFK62_RS25555 (NFK62_25545) | 67045..73887 | - | 6843 | WP_279276003.1 | SNF2-related protein | - |
| NFK62_RS25560 (NFK62_25550) | 73976..75664 | + | 1689 | WP_279276004.1 | portal protein | - |
| NFK62_RS25565 (NFK62_25555) | 75678..76691 | + | 1014 | WP_279276005.1 | head processing protein | - |
| NFK62_RS25570 (NFK62_25560) | 77244..78161 | + | 918 | WP_279276006.1 | hypothetical protein | - |
| NFK62_RS25575 (NFK62_25565) | 78162..78653 | - | 492 | WP_126510765.1 | TIGR02594 family protein | - |
| NFK62_RS25580 (NFK62_25570) | 78763..79056 | - | 294 | WP_126510767.1 | hypothetical protein | - |
| NFK62_RS25585 (NFK62_25575) | 79046..82084 | - | 3039 | WP_279276007.1 | hypothetical protein | - |
| NFK62_RS25590 (NFK62_25580) | 82186..82533 | - | 348 | WP_071444909.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|