MGE detailed information
MGE type: IScluster/Tn MGE length: 9313 bp
Accession: NZ_CP099346 Location: 2587..11899 Organism: Escherichia marmotae strain RHB35-E2-C08 Replicon: plasmid unnamed2
Accession: NZ_CP099346 Location: 2587..11899 Organism: Escherichia marmotae strain RHB35-E2-C08 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFK54_RS24215 (1) | 1..858 | + | 858 | WP_279283696.1 | incFII family plasmid replication initiator RepA | - |
| NFK54_RS24220 (2587) | 2587..3177 | - | 591 | WP_279283676.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NFK54_RS24225 (3338) | 3338..6322 | + | 2985 | WP_273785354.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| NFK54_RS24230 (6543) | 6543..7034 | + | 492 | WP_279283707.1 | type IV secretion protein Rhs | - |
| NFK54_RS24235 (7031) | 7031..7423 | + | 393 | WP_279283697.1 | hypothetical protein | - |
| NFK54_RS24240 (7436) | 7436..7969 | + | 534 | WP_107136013.1 | Major exported protein | VF |
| NFK54_RS24245 (9046) | 9046..9282 | - | 237 | WP_279283698.1 | protein L | - |
| NFK54_RS24250 (9301) | 9301..9561 | - | 261 | WP_279283699.1 | hypothetical protein | - |
| NFK54_RS24255 (9783) | 9783..10028 | + | 246 | WP_279283700.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NFK54_RS24260 (10009) | 10009..10284 | + | 276 | WP_279283701.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| NFK54_RS24265 (10509) | 10509..11078 | + | 570 | Protein_10 | replication initiation protein | - |
| NFK54_RS24270 (11231) | 11231..11899 | + | 669 | WP_279283702.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NFK54_RS24275 (11926) | 11926..12438 | + | 513 | WP_063101691.1 | molecular chaperone Tir | - |
| NFK54_RS24280 (12537) | 12537..13373 | - | 837 | WP_279283703.1 | DUF6430 domain-containing protein | - |
| NFK54_RS24285 (13482) | 13482..13664 | + | 183 | Protein_14 | resolvase | - |
| NFK54_RS24290 (13743) | 13743..13991 | - | 249 | Protein_15 | iron-containing alcohol dehydrogenase | - |
| NFK54_RS24295 (14076) | 14076..14699 | - | 624 | WP_279283704.1 | potassium channel family protein | - |
| NFK54_RS24300 (15576) | 15576..16583 | + | 1008 | WP_279283705.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|