MGE detailed information
MGE type: Prophage MGE length: 74364 bp
Accession: NZ_CP099298 Location: 2155204..2229567 Organism: Citrobacter freundii strain RHB02-E3-C01 Replicon: chromosome
Accession: NZ_CP099298 Location: 2155204..2229567 Organism: Citrobacter freundii strain RHB02-E3-C01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ20_RS10285 () | 2150861..2151304 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| NFJ20_RS10290 () | 2151333..2152076 | + | 744 | WP_003034865.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NFJ20_RS10295 () | 2152111..2152632 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NFJ20_RS10300 () | 2152713..2153324 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| NFJ20_RS10305 () | 2153333..2154343 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NFJ20_RS10310 () | 2154422..2155207 | - | 786 | WP_003034874.1 | zinc ABC transporter permease subunit ZnuB | - |
| NFJ20_RS10315 () | 2155204..2155959 | - | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| NFJ20_RS10320 () | 2156038..2156982 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NFJ20_RS10325 () | 2156998..2158317 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| NFJ20_RS10330 () | 2158437..2159408 | + | 972 | WP_279274437.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NFJ20_RS10335 () | 2159452..2160894 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| NFJ20_RS10340 () | 2161013..2161882 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| NFJ20_RS10345 () | 2162250..2163725 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| NFJ20_RS10350 () | 2163959..2165770 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| NFJ20_RS10355 () | 2165805..2166446 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFJ20_RS10360 () | 2166512..2167690 | - | 1179 | WP_086529336.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFJ20_RS10365 () | 2167822..2168112 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| NFJ20_RS10370 () | 2168234..2168587 | + | 354 | WP_032949525.1 | protein YebF | - |
| NFJ20_RS10375 () | 2168682..2169341 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| NFJ20_RS10380 () | 2169428..2171482 | + | 2055 | WP_279274438.1 | oligopeptidase B | - |
| NFJ20_RS10385 () | 2171485..2172147 | - | 663 | WP_192468854.1 | exodeoxyribonuclease X | - |
| NFJ20_RS10390 () | 2172171..2172827 | - | 657 | WP_003034921.1 | carbon-nitrogen hydrolase family protein | - |
| NFJ20_RS10395 () | 2172934..2173164 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| NFJ20_RS10400 () | 2173308..2173682 | + | 375 | WP_003841654.1 | CopC domain-containing protein YobA | - |
| NFJ20_RS10405 () | 2173686..2174558 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| NFJ20_RS10410 () | 2174579..2174917 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - | 2175038..2175180 | - | 143 | - | - | Antitoxin Detail |
| - | 2175073..2175176 | + | 104 | - | - | Toxin Detail |
| NFJ20_RS10415 () | 2175254..2176339 | - | 1086 | WP_019076535.1 | hypothetical protein ; Integrase | Integrase |
| NFJ20_RS10420 () | 2176308..2176580 | - | 273 | WP_032170291.1 | excisionase | - |
| NFJ20_RS10425 () | 2176644..2176886 | - | 243 | WP_001237028.1 | DUF4060 family protein | - |
| NFJ20_RS10430 () | 2176873..2177520 | - | 648 | WP_019076536.1 | hypothetical protein | - |
| NFJ20_RS10435 () | 2177513..2177857 | - | 345 | WP_019076537.1 | hypothetical protein | - |
| NFJ20_RS10440 () | 2177892..2178983 | - | 1092 | WP_199981214.1 | RecT family recombinase | - |
| NFJ20_RS10445 () | 2178996..2181530 | - | 2535 | WP_279274439.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| NFJ20_RS10450 () | 2181670..2181831 | - | 162 | WP_053389201.1 | YdaE family protein | - |
| NFJ20_RS10455 () | 2181843..2182049 | - | 207 | WP_016156718.1 | hypothetical protein | - |
| NFJ20_RS10460 () | 2182343..2182756 | - | 414 | WP_029139499.1 | helix-turn-helix domain-containing protein | - |
| NFJ20_RS10465 () | 2182868..2183089 | + | 222 | WP_019076542.1 | YdaS family helix-turn-helix protein | - |
| NFJ20_RS10470 () | 2183101..2183640 | + | 540 | WP_029139500.1 | toxin YdaT domain-containing protein | - |
| NFJ20_RS10475 () | 2183978..2184898 | + | 921 | WP_279274521.1 | replication protein | - |
| NFJ20_RS10480 () | 2184901..2185650 | + | 750 | WP_279274440.1 | ATP-binding protein | - |
| NFJ20_RS10485 () | 2185669..2185980 | + | 312 | WP_019078496.1 | hypothetical protein | - |
| NFJ20_RS10490 () | 2185977..2186480 | + | 504 | WP_279274441.1 | hypothetical protein | - |
| NFJ20_RS10495 () | 2186477..2186647 | + | 171 | WP_279274442.1 | hypothetical protein | - |
| NFJ20_RS10500 () | 2186644..2187111 | + | 468 | WP_279274443.1 | ead/Ea22-like family protein | - |
| NFJ20_RS10505 () | 2187111..2187533 | + | 423 | WP_279274444.1 | HNH endonuclease | - |
| NFJ20_RS10510 () | 2187530..2188378 | + | 849 | WP_279274445.1 | DUF551 domain-containing protein | - |
| NFJ20_RS10515 () | 2188607..2188864 | + | 258 | WP_019076548.1 | hypothetical protein | - |
| NFJ20_RS10520 () | 2188861..2190735 | + | 1875 | WP_279274446.1 | DNA cytosine methyltransferase | - |
| NFJ20_RS10525 () | 2191468..2191701 | + | 234 | WP_019076551.1 | DinI-like family protein | - |
| NFJ20_RS10530 () | 2191811..2192032 | + | 222 | WP_019076552.1 | hypothetical protein | - |
| NFJ20_RS10535 () | 2192115..2192717 | + | 603 | WP_019076553.1 | DUF1367 family protein | - |
| NFJ20_RS10540 () | 2192717..2192923 | + | 207 | WP_019076554.1 | hypothetical protein | - |
| NFJ20_RS10545 () | 2192926..2193537 | + | 612 | WP_279274447.1 | recombination protein NinG | - |
| NFJ20_RS10550 () | 2193534..2193671 | + | 138 | WP_016156248.1 | YlcG family protein | - |
| NFJ20_RS10555 () | 2193668..2194357 | + | 690 | WP_279274448.1 | bacteriophage antitermination protein Q | - |
| NFJ20_RS10560 () | 2194513..2195028 | + | 516 | WP_019076556.1 | hypothetical protein | - |
| NFJ20_RS10565 () | 2195185..2195463 | + | 279 | WP_016150496.1 | phage holin | - |
| NFJ20_RS10570 () | 2195435..2196007 | + | 573 | WP_029139503.1 | lysozyme | - |
| NFJ20_RS10575 () | 2196007..2196510 | + | 504 | WP_279274449.1 | DUF2514 domain-containing protein | - |
| NFJ20_RS10580 () | 2196804..2197247 | - | 444 | WP_279274544.1 | hypothetical protein | - |
| NFJ20_RS10585 () | 2197146..2197739 | + | 594 | WP_279274522.1 | putative metallopeptidase | - |
| NFJ20_RS10590 () | 2197771..2198259 | + | 489 | WP_019076561.1 | DUF2280 domain-containing protein | - |
| NFJ20_RS10595 () | 2198256..2199827 | + | 1572 | WP_019076562.1 | terminase | - |
| NFJ20_RS10600 () | 2199832..2201235 | + | 1404 | WP_019076563.1 | DUF4055 domain-containing protein | - |
| NFJ20_RS10605 () | 2201237..2202343 | + | 1107 | WP_279274450.1 | hypothetical protein | - |
| NFJ20_RS10610 () | 2202664..2203416 | + | 753 | WP_019076565.1 | hypothetical protein | - |
| NFJ20_RS10615 () | 2203434..2204573 | + | 1140 | WP_279274451.1 | P22 phage major capsid protein family protein | - |
| NFJ20_RS10620 () | 2204613..2204918 | + | 306 | WP_279274452.1 | hypothetical protein | - |
| NFJ20_RS10625 () | 2204921..2205403 | + | 483 | WP_047416523.1 | hypothetical protein | - |
| NFJ20_RS10630 () | 2205405..2205758 | + | 354 | WP_279274453.1 | hypothetical protein | - |
| NFJ20_RS10635 () | 2205761..2206360 | + | 600 | WP_019076570.1 | hypothetical protein | - |
| NFJ20_RS10640 () | 2206350..2206799 | + | 450 | WP_019076571.1 | phage tail terminator-like protein | - |
| NFJ20_RS10645 () | 2206846..2207778 | + | 933 | WP_029139505.1 | phage tail tube protein | - |
| NFJ20_RS10650 () | 2207820..2208158 | + | 339 | WP_019076572.1 | phage tail assembly chaperone | - |
| NFJ20_RS10655 () | 2208176..2208463 | + | 288 | WP_019076573.1 | DUF1799 domain-containing protein | - |
| NFJ20_RS10660 () | 2208463..2211516 | + | 3054 | WP_279274454.1 | phage tail tape measure protein | - |
| NFJ20_RS10665 () | 2211590..2211976 | + | 387 | WP_157132051.1 | hypothetical protein | - |
| NFJ20_RS10670 () | 2212468..2212647 | + | 180 | WP_016156674.1 | hypothetical protein | - |
| NFJ20_RS10675 () | 2212658..2213155 | + | 498 | WP_016156673.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| NFJ20_RS10680 () | 2213234..2213584 | + | 351 | WP_019076576.1 | phage tail protein | - |
| NFJ20_RS10685 () | 2213593..2214366 | + | 774 | WP_200921488.1 | phage minor tail protein L | - |
| NFJ20_RS10690 () | 2214379..2215110 | + | 732 | WP_279274455.1 | C40 family peptidase | - |
| NFJ20_RS10695 () | 2215098..2215691 | + | 594 | WP_019076579.1 | tail assembly protein | - |
| NFJ20_RS10700 () | 2215747..2218974 | + | 3228 | WP_279274456.1 | DUF1983 domain-containing protein | - |
| NFJ20_RS10705 () | 2218976..2219920 | + | 945 | WP_221661704.1 | DUF6453 family protein | - |
| NFJ20_RS10710 () | 2219930..2220271 | + | 342 | Protein_2097 | phage tail protein | - |
| NFJ20_RS10715 () | 2220357..2220764 | + | 408 | WP_021567585.1 | IS66 family transposase ISCro1 | Transposase |
| NFJ20_RS10720 () | 2220761..2221111 | + | 351 | WP_021567584.1 | IS66 family transposase ISEcl6 | Transposase |
| NFJ20_RS10725 () | 2221142..2222734 | + | 1593 | WP_039264109.1 | IS66 family transposase ISEcl6 | Transposase |
| NFJ20_RS10730 () | 2222834..2223610 | + | 777 | WP_279274457.1 | tail fiber domain-containing protein | - |
| NFJ20_RS10735 () | 2223738..2223980 | - | 243 | WP_038642073.1 | DinI family protein | - |
| NFJ20_RS10740 () | 2224002..2224448 | + | 447 | WP_279274458.1 | S24 family peptidase | - |
| NFJ20_RS10750 () | 2225142..2225462 | - | 321 | WP_004197483.1 | hypothetical protein | - |
| NFJ20_RS10755 () | 2225717..2226388 | - | 672 | WP_279274459.1 | SOS response-associated peptidase | - |
| NFJ20_RS10760 () | 2226873..2227514 | + | 642 | WP_279274460.1 | protein-serine/threonine phosphatase | - |
| NFJ20_RS10765 () | 2227515..2227706 | - | 192 | WP_279274461.1 | YebW family protein | - |
| NFJ20_RS10770 () | 2227809..2228045 | - | 237 | WP_029139506.1 | YebV family protein | - |
| NFJ20_RS10775 () | 2228146..2229534 | - | 1389 | WP_197730871.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFJ20_RS10780 () | 2229647..2232280 | - | 2634 | WP_003034947.1 | PqiB family protein | - |
| NFJ20_RS10785 () | 2232249..2233532 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| NFJ20_RS10790 () | 2233661..2234158 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|