MGE detailed information
MGE type: Prophage MGE length: 61560 bp
Accession: NZ_CP099217 Location: 2156419..2217978 Organism: Citrobacter freundii strain RHB16-SO-C03 Replicon: chromosome
Accession: NZ_CP099217 Location: 2156419..2217978 Organism: Citrobacter freundii strain RHB16-SO-C03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ87_RS10470 () | 2152818..2153459 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFJ87_RS10475 () | 2153527..2154705 | - | 1179 | WP_279270799.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFJ87_RS10480 () | 2154837..2155127 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| NFJ87_RS10485 () | 2155249..2155602 | + | 354 | WP_279270800.1 | protein YebF | - |
| NFJ87_RS10490 () | 2155697..2156356 | + | 660 | WP_279270801.1 | tellurite resistance TerB family protein | - |
| NFJ87_RS10495 () | 2156443..2158497 | + | 2055 | WP_279270802.1 | oligopeptidase B | - |
| NFJ87_RS10500 () | 2158488..2159150 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| NFJ87_RS10505 () | 2159174..2159830 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| NFJ87_RS10510 () | 2159937..2160167 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| NFJ87_RS10515 () | 2160311..2160685 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| NFJ87_RS10520 () | 2160689..2161561 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| NFJ87_RS10525 () | 2161582..2161920 | + | 339 | WP_279270803.1 | YebY family protein | - |
| - | 2162041..2162181 | - | 141 | - | - | Antitoxin Detail |
| - | 2162076..2162179 | + | 104 | - | - | Toxin Detail |
| NFJ87_RS10530 () | 2162257..2163342 | - | 1086 | WP_279270804.1 | hypothetical protein ; Integrase | Integrase |
| NFJ87_RS10535 () | 2163311..2163583 | - | 273 | WP_199950439.1 | excisionase | - |
| NFJ87_RS10540 () | 2163648..2163890 | - | 243 | WP_005121071.1 | DUF4060 family protein | - |
| NFJ87_RS10545 () | 2163930..2165015 | - | 1086 | WP_038641385.1 | RecT family recombinase | - |
| NFJ87_RS10550 () | 2165027..2167969 | - | 2943 | WP_279270805.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| NFJ87_RS10555 () | 2168096..2168383 | - | 288 | WP_279270806.1 | DNA breaking-rejoining protein | - |
| NFJ87_RS10560 () | 2168470..2168631 | - | 162 | WP_279270896.1 | YdaE family protein | - |
| NFJ87_RS10565 () | 2168639..2168836 | - | 198 | WP_279270807.1 | DUF1482 family protein | - |
| NFJ87_RS10570 () | 2168836..2169036 | - | 201 | WP_042309065.1 | hypothetical protein | - |
| NFJ87_RS10575 () | 2169523..2169729 | + | 207 | WP_279270808.1 | hypothetical protein | - |
| NFJ87_RS10580 () | 2169757..2170191 | - | 435 | WP_279270809.1 | hypothetical protein | - |
| NFJ87_RS10585 () | 2170194..2170829 | - | 636 | WP_279270810.1 | transcriptional regulator | - |
| NFJ87_RS10590 () | 2170826..2171110 | - | 285 | WP_279270811.1 | type II toxin-antitoxin system HigB family toxin | - |
| NFJ87_RS10595 () | 2171365..2171832 | - | 468 | WP_279270812.1 | helix-turn-helix domain-containing protein | - |
| NFJ87_RS10600 () | 2171846..2172070 | + | 225 | WP_279270813.1 | YdaS family helix-turn-helix protein | - |
| NFJ87_RS10605 () | 2172073..2172612 | + | 540 | WP_279270814.1 | toxin YdaT domain-containing protein | - |
| NFJ87_RS10610 () | 2172762..2173634 | + | 873 | WP_279270815.1 | DNA-binding protein | - |
| NFJ87_RS10615 () | 2173637..2174386 | + | 750 | WP_279270816.1 | ATP-binding protein | - |
| NFJ87_RS10620 () | 2174405..2174716 | + | 312 | WP_213313650.1 | hypothetical protein | - |
| NFJ87_RS10625 () | 2174713..2175188 | + | 476 | Protein_2080 | class I SAM-dependent methyltransferase | - |
| NFJ87_RS10630 () | 2175192..2175746 | + | 555 | WP_279270817.1 | DUF550 domain-containing protein | - |
| NFJ87_RS10635 () | 2175798..2175917 | + | 120 | Protein_2082 | 3'-5' exoribonuclease | - |
| NFJ87_RS10640 () | 2176161..2176541 | - | 381 | WP_053271636.1 | hypothetical protein | - |
| NFJ87_RS10645 () | 2176821..2177018 | + | 198 | WP_053271635.1 | hypothetical protein | - |
| NFJ87_RS10650 () | 2177242..2177805 | - | 564 | WP_170973743.1 | hypothetical protein | - |
| NFJ87_RS10655 () | 2178296..2178529 | + | 234 | WP_016236996.1 | DinI family protein | - |
| NFJ87_RS10660 () | 2178647..2178895 | + | 249 | WP_001568777.1 | hypothetical protein | - |
| NFJ87_RS10665 () | 2178930..2179529 | + | 600 | WP_110497812.1 | DUF1367 family protein | - |
| NFJ87_RS10670 () | 2179529..2179735 | + | 207 | WP_279270818.1 | hypothetical protein | - |
| NFJ87_RS10675 () | 2179738..2180346 | + | 609 | WP_279270819.1 | recombination protein NinG | - |
| NFJ87_RS10680 () | 2180343..2180474 | + | 132 | WP_137378508.1 | YlcG family protein | - |
| NFJ87_RS10685 () | 2180471..2181151 | + | 681 | WP_279270820.1 | bacteriophage antitermination protein Q | - |
| NFJ87_RS10690 () | 2181784..2182155 | + | 372 | WP_279270821.1 | hypothetical protein | - |
| NFJ87_RS10695 () | 2182583..2182726 | - | 144 | WP_279270822.1 | hypothetical protein | - |
| NFJ87_RS10700 () | 2182876..2183154 | + | 279 | WP_279270823.1 | HP1 family phage holin | - |
| NFJ87_RS10705 () | 2183126..2183623 | + | 498 | WP_279270824.1 | lysozyme | - |
| NFJ87_RS10715 () | 2184882..2185385 | + | 504 | WP_279270825.1 | DUF2514 domain-containing protein | - |
| NFJ87_RS10720 () | 2185481..2186173 | - | 693 | WP_279270826.1 | hypothetical protein | - |
| NFJ87_RS10725 () | 2186440..2186802 | + | 363 | WP_227408807.1 | HNH endonuclease | - |
| NFJ87_RS10730 () | 2186938..2187453 | - | 516 | WP_003841965.1 | hypothetical protein | - |
| NFJ87_RS10735 () | 2187680..2188114 | + | 435 | WP_213313657.1 | P27 family phage terminase small subunit | - |
| NFJ87_RS10740 () | 2188151..2189866 | + | 1716 | WP_213313658.1 | terminase large subunit | - |
| NFJ87_RS10745 () | 2189860..2190039 | + | 180 | WP_123977199.1 | hypothetical protein | - |
| NFJ87_RS10750 () | 2190039..2191298 | + | 1260 | WP_279270827.1 | phage portal protein | - |
| NFJ87_RS10755 () | 2191335..2192255 | + | 921 | WP_032949501.1 | S49 family peptidase | - |
| NFJ87_RS10760 () | 2192328..2193614 | + | 1287 | WP_057064762.1 | phage major capsid protein | - |
| NFJ87_RS10765 () | 2193711..2194088 | + | 378 | WP_044700565.1 | hypothetical protein | - |
| NFJ87_RS10770 () | 2194069..2194386 | + | 318 | WP_003832371.1 | head-tail connector protein | - |
| NFJ87_RS10775 () | 2194383..2194733 | + | 351 | WP_279270828.1 | head-tail adaptor protein | - |
| NFJ87_RS10780 () | 2194702..2195091 | + | 390 | WP_100194322.1 | hypothetical protein | - |
| NFJ87_RS10785 () | 2195088..2195489 | + | 402 | WP_279270829.1 | HK97 gp10 family phage protein | - |
| NFJ87_RS10790 () | 2195523..2196005 | + | 483 | WP_003832379.1 | hypothetical protein | - |
| NFJ87_RS10795 () | 2196068..2196430 | + | 363 | WP_279270830.1 | phage tail protein | - |
| NFJ87_RS10800 () | 2196681..2199983 | + | 3303 | WP_279270831.1 | phage tail tape measure protein | - |
| NFJ87_RS10805 () | 2200017..2200316 | + | 300 | WP_279270897.1 | phage tail protein | - |
| NFJ87_RS10810 () | 2200325..2201020 | + | 696 | WP_279270832.1 | phage minor tail protein L | - |
| NFJ87_RS10815 () | 2201032..2201766 | + | 735 | WP_279270833.1 | NlpC/P60 family protein | - |
| NFJ87_RS10820 () | 2201664..2202341 | + | 678 | WP_279270834.1 | tail assembly protein | - |
| NFJ87_RS10825 () | 2202413..2205814 | + | 3402 | WP_279270835.1 | host specificity protein J | - |
| NFJ87_RS10830 () | 2205856..2207868 | + | 2013 | WP_279270836.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NFJ87_RS10835 () | 2207880..2208464 | + | 585 | WP_279270837.1 | DUF4376 domain-containing protein | - |
| NFJ87_RS10840 () | 2209378..2210046 | - | 669 | WP_279270838.1 | HNH endonuclease signature motif containing protein | - |
| NFJ87_RS10845 () | 2210396..2210683 | - | 288 | WP_038641317.1 | hypothetical protein | - |
| NFJ87_RS10850 () | 2210737..2211348 | - | 612 | WP_038641316.1 | hypothetical protein | - |
| NFJ87_RS10855 () | 2211672..2211986 | + | 315 | Protein_2126 | recombinase family protein | - |
| NFJ87_RS10860 () | 2212039..2212338 | - | 300 | WP_052283340.1 | putative quinol monooxygenase | - |
| NFJ87_RS10865 () | 2212619..2212741 | - | 123 | Protein_2128 | DinI-like family protein | - |
| NFJ87_RS10870 () | 2213032..2214591 | + | 1560 | WP_159122007.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| NFJ87_RS10875 () | 2214704..2214799 | - | 96 | Protein_2130 | SOS response-associated peptidase | - |
| NFJ87_RS10880 () | 2215284..2215925 | + | 642 | WP_016150398.1 | protein-serine/threonine phosphatase | - |
| NFJ87_RS10885 () | 2215926..2216117 | - | 192 | WP_003034941.1 | YebW family protein | - |
| NFJ87_RS10890 () | 2216220..2216456 | - | 237 | WP_029139506.1 | YebV family protein | - |
| NFJ87_RS10895 () | 2216557..2217945 | - | 1389 | WP_200014635.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFJ87_RS10900 () | 2218058..2220691 | - | 2634 | WP_279270839.1 | PqiB family protein | - |
| NFJ87_RS10905 () | 2220660..2221943 | - | 1284 | WP_139935480.1 | membrane integrity lipid transport subunit YebS | - |
| NFJ87_RS10910 () | 2222072..2222569 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|