MGE detailed information
MGE type: Genomic_island MGE length: 11328 bp
Accession: NZ_CP098831 Location: 821800..833127 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Accession: NZ_CP098831 Location: 821800..833127 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH10_RS03935 (817246) | 817246..818344 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| NFH10_RS03940 (818354) | 818354..819871 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NFH10_RS03945 (819947) | 819947..820492 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NFH10_RS03950 (820757) | 820757..821515 | + | 759 | WP_000244318.1 | amidase activator ActS | - |
| NFH10_RS03960 (821800) | 821800..822606 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| NFH10_RS03965 (822881) | 822881..823141 | - | 261 | WP_023227725.1 | hypothetical protein | - |
| NFH10_RS03970 (823309) | 823309..823536 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NFH10_RS03975 (823536) | 823536..823934 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NFH10_RS03980 (824738) | 824738..825274 | + | 537 | WP_023227726.1 | Attachment invasion locus protein | VF |
| NFH10_RS03985 (825321) | 825321..825953 | + | 633 | WP_023227727.1 | YfdX family protein | - |
| NFH10_RS03990 (826672) | 826672..827259 | + | 588 | WP_023227728.1 | putative fimbrial-like protein YbgD | VF |
| NFH10_RS03995 (827379) | 827379..829868 | + | 2490 | WP_064441659.1 | Outer membrane usher protein PapC | VF |
| NFH10_RS04000 (829909) | 829909..830652 | + | 744 | WP_000798491.1 | Chaperone protein PapD | VF |
| NFH10_RS04005 (830649) | 830649..831725 | + | 1077 | WP_023227730.1 | fimbrial OM outer membrane protein | - |
| NFH10_RS04010 (831870) | 831870..832382 | + | 513 | WP_000336260.1 | CaiF/GrlA family transcriptional regulator | - |
| NFH10_RS04015 (832369) | 832369..833127 | + | 759 | WP_023227731.1 | hypothetical protein | - |
| NFH10_RS04020 (833337) | 833337..834221 | - | 885 | WP_053505586.1 | nickel/cobalt efflux protein RcnA | - |
| NFH10_RS04025 (834343) | 834343..834615 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NFH10_RS04030 (834646) | 834646..835875 | - | 1230 | WP_000036841.1 | amino acid permease | - |
| NFH10_RS04035 (836017) | 836017..836472 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NFH10_RS04040 (836576) | 836576..837439 | + | 864 | WP_023227733.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|