MGE detailed information
MGE type: Genomic_island MGE length: 44316 bp
Accession: NZ_CP098831 Location: 3672954..3717269 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Accession: NZ_CP098831 Location: 3672954..3717269 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH10_RS18260 () | 3668525..3670969 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NFH10_RS18265 () | 3671078..3671845 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| NFH10_RS18270 () | 3672216..3672623 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NFH10_RS18275 () | 3672954..3673673 | + | 720 | WP_023226792.1 | Outer membrane protein PagN | VF |
| NFH10_RS18280 () | 3673677..3673865 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| NFH10_RS18285 () | 3673901..3674034 | + | 134 | Protein_3586 | transposase | - |
| NFH10_RS18290 () | 3674636..3675253 | - | 618 | WP_023226793.1 | protein TioA | - |
| NFH10_RS18295 () | 3675393..3675848 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| NFH10_RS18300 () | 3675981..3677027 | - | 1047 | WP_223228889.1 | CfaE/CblD family pilus tip adhesin | - |
| NFH10_RS18305 () | 3677062..3679749 | - | 2688 | WP_023226795.1 | hypothetical protein | VF |
| NFH10_RS18310 () | 3679858..3680433 | - | 576 | WP_000287810.1 | CFA/I fimbrial subunit B | VF |
| NFH10_RS18315 () | 3680484..3681194 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| NFH10_RS18320 () | 3682101..3682785 | + | 685 | Protein_3593 | IS21 family transposase ISEc62 | Transposase |
| NFH10_RS18325 () | 3682825..3683011 | - | 187 | Protein_3594 | IS3 family transposase IS1351 | Transposase |
| NFH10_RS18330 () | 3683092..3683211 | - | 120 | Protein_3595 | hypothetical protein | - |
| NFH10_RS18335 () | 3683331..3684278 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NFH10_RS18340 () | 3684772..3685012 | - | 241 | Protein_3597 | PerC family transcriptional regulator | - |
| NFH10_RS18345 () | 3685095..3685916 | - | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| NFH10_RS18350 () | 3686324..3686794 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NFH10_RS18355 () | 3686816..3689326 | - | 2511 | WP_053505593.1 | F1 capsule-anchoring protein | VF |
| NFH10_RS18360 () | 3689350..3690090 | - | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| NFH10_RS18365 () | 3690165..3690662 | - | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| NFH10_RS18370 () | 3690795..3691289 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| NFH10_RS18375 () | 3692057..3692758 | - | 702 | Protein_3604 | integrase core domain-containing protein | - |
| NFH10_RS18380 () | 3692822..3693073 | + | 252 | WP_131166435.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 3692838..3693063 | - | 226 | - | - | Antitoxin Detail |
| NFH10_RS18385 () | 3693119..3693583 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| NFH10_RS18390 () | 3693964..3694809 | - | 846 | Protein_3607 | hypothetical protein | VF |
| NFH10_RS18395 () | 3694829..3694966 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| NFH10_RS18400 () | 3695109..3695717 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| NFH10_RS18405 () | 3695718..3699842 | - | 4125 | WP_023227779.1 | RHS repeat-associated core domain-containing protein | - |
| NFH10_RS18410 () | 3699861..3700307 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| NFH10_RS18415 () | 3700331..3702520 | - | 2190 | WP_023227778.1 | hypothetical protein | VF |
| NFH10_RS18420 () | 3702917..3703438 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| NFH10_RS18425 () | 3703462..3703878 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| NFH10_RS18430 () | 3703875..3703969 | - | 95 | Protein_3615 | cytoplasmic protein | - |
| NFH10_RS18435 () | 3704005..3704466 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| NFH10_RS18440 () | 3704451..3704921 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| NFH10_RS18445 () | 3704964..3705731 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| NFH10_RS18450 () | 3705731..3709600 | - | 3870 | WP_023227775.1 | hypothetical protein | VF |
| NFH10_RS18455 () | 3709634..3710065 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| NFH10_RS18460 () | 3710267..3711040 | - | 774 | WP_023227774.1 | Rap1a/Tai family immunity protein | - |
| NFH10_RS18465 () | 3711045..3712349 | - | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| NFH10_RS18470 () | 3712346..3713689 | - | 1344 | WP_023227773.1 | hypothetical protein | VF |
| NFH10_RS18475 () | 3713693..3714229 | - | 537 | WP_023227772.1 | hypothetical protein | VF |
| NFH10_RS18480 () | 3714296..3714781 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| NFH10_RS18485 () | 3714924..3715307 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NFH10_RS18490 () | 3715292..3715777 | - | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| NFH10_RS18495 () | 3715820..3716014 | - | 195 | Protein_3628 | type VI secretion system lipoprotein TssJ | - |
| NFH10_RS18500 () | 3716082..3716567 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| NFH10_RS18505 () | 3716823..3717155 | - | 333 | WP_077907151.1 | hypothetical protein | - |
| NFH10_RS18510 () | 3717282..3717440 | - | 159 | WP_001584850.1 | BPSL0067 family protein | - |
| NFH10_RS18515 () | 3717455..3718963 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NFH10_RS18520 () | 3718987..3719532 | - | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|