MGE detailed information
MGE type: Prophage MGE length: 21580 bp
Accession: NZ_CP098831 Location: 2004457..2026036 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Accession: NZ_CP098831 Location: 2004457..2026036 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH10_RS09635 () | 2000730..2001371 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NFH10_RS09640 () | 2001471..2002649 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NFH10_RS09645 () | 2002780..2003070 | + | 291 | WP_001579458.1 | DNA damage-inducible protein YebG | - |
| NFH10_RS09650 () | 2003138..2003491 | + | 354 | WP_001042123.1 | protein YebF | - |
| NFH10_RS09655 () | 2003585..2004244 | + | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| NFH10_RS09660 () | 2004457..2006508 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| NFH10_RS09665 () | 2006543..2007241 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NFH10_RS09670 () | 2007265..2007921 | - | 657 | WP_023227121.1 | carbon-nitrogen hydrolase family protein | - |
| NFH10_RS09675 () | 2008029..2008259 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NFH10_RS09680 () | 2008397..2008771 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NFH10_RS09685 () | 2008772..2009647 | + | 876 | WP_001579467.1 | copper homeostasis membrane protein CopD | - |
| NFH10_RS09690 () | 2009664..2010017 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2010117..2010262 | - | 146 | - | - | Antitoxin Detail |
| - | 2010157..2010260 | + | 104 | - | - | Toxin Detail |
| NFH10_RS09695 () | 2010381..2011031 | - | 651 | Protein_1895 | hypothetical protein ; Integrase | Integrase |
| NFH10_RS09700 () | 2011301..2011507 | + | 207 | Protein_1896 | phage tail protein | - |
| NFH10_RS09705 () | 2011592..2011834 | + | 243 | Protein_1897 | DUF4376 domain-containing protein | - |
| NFH10_RS09710 () | 2011940..2012271 | + | 332 | Protein_1898 | DUF1353 domain-containing protein | - |
| NFH10_RS09715 () | 2012320..2012429 | + | 110 | Protein_1899 | tail fiber assembly protein | - |
| NFH10_RS09720 () | 2012520..2012705 | - | 186 | WP_071787785.1 | PagK family vesicle-borne virulence factor | - |
| NFH10_RS09725 () | 2012957..2013145 | - | 189 | Protein_1901 | tail fiber assembly protein | - |
| NFH10_RS09730 () | 2013141..2013911 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| NFH10_RS09740 () | 2014401..2014529 | + | 129 | Protein_1903 | helix-turn-helix domain-containing protein | - |
| NFH10_RS09745 () | 2014558..2015358 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| NFH10_RS24780 () | 2016298..2016414 | - | 117 | WP_200098169.1 | integrase | - |
| NFH10_RS09755 () | 2016789..2017996 | + | 1208 | Protein_1906 | IS256 family transposase ISEc39 | Transposase |
| NFH10_RS09760 () | 2018142..2018282 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| NFH10_RS09765 () | 2018448..2018717 | - | 270 | WP_077909973.1 | hypothetical protein | - |
| NFH10_RS09770 () | 2019087..2019506 | + | 420 | WP_023226867.1 | GNAT family N-acetyltransferase | - |
| NFH10_RS09775 () | 2019893..2020369 | - | 477 | WP_023226866.1 | hypothetical protein | - |
| NFH10_RS09780 () | 2020697..2021092 | - | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| NFH10_RS09785 () | 2021776..2022498 | + | 723 | WP_023226865.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NFH10_RS09790 () | 2022783..2022947 | + | 165 | WP_001134856.1 | membrane protein | - |
| NFH10_RS09795 () | 2023170..2023820 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| NFH10_RS09800 () | 2023839..2024030 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| NFH10_RS09805 () | 2024141..2024377 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NFH10_RS09810 () | 2024495..2025934 | - | 1440 | WP_051129280.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NFH10_RS09815 () | 2026012..2028645 | - | 2634 | WP_001529852.1 | PqiB family protein | - |
| NFH10_RS09820 () | 2028614..2029897 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| NFH10_RS09825 () | 2030026..2030523 | + | 498 | WP_023226862.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|