MGE detailed information
MGE type: Genomic_island MGE length: 11328 bp
Accession: NZ_CP098829 Location: 894661..905988 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS6 Replicon: chromosome
Accession: NZ_CP098829 Location: 894661..905988 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFG92_RS04380 (890107) | 890107..891205 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| NFG92_RS04385 (891215) | 891215..892732 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NFG92_RS04390 (892808) | 892808..893353 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NFG92_RS04395 (893618) | 893618..894376 | + | 759 | WP_000244318.1 | amidase activator ActS | - |
| NFG92_RS04405 (894661) | 894661..895467 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| NFG92_RS04410 (895742) | 895742..896002 | - | 261 | WP_023227725.1 | hypothetical protein | - |
| NFG92_RS04415 (896170) | 896170..896397 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NFG92_RS04420 (896397) | 896397..896795 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NFG92_RS04425 (897599) | 897599..898135 | + | 537 | WP_023227726.1 | Attachment invasion locus protein | VF |
| NFG92_RS04430 (898182) | 898182..898814 | + | 633 | WP_023227727.1 | YfdX family protein | - |
| NFG92_RS04435 (899533) | 899533..900120 | + | 588 | WP_023227728.1 | putative fimbrial-like protein YbgD | VF |
| NFG92_RS04440 (900240) | 900240..902729 | + | 2490 | WP_064441659.1 | Outer membrane usher protein PapC | VF |
| NFG92_RS04445 (902770) | 902770..903513 | + | 744 | WP_000798491.1 | Chaperone protein PapD | VF |
| NFG92_RS04450 (903510) | 903510..904586 | + | 1077 | WP_023227730.1 | fimbrial OM outer membrane protein | - |
| NFG92_RS04455 (904731) | 904731..905243 | + | 513 | WP_000336260.1 | CaiF/GrlA family transcriptional regulator | - |
| NFG92_RS04460 (905230) | 905230..905988 | + | 759 | WP_023227731.1 | hypothetical protein | - |
| NFG92_RS04465 (906198) | 906198..907082 | - | 885 | WP_053505586.1 | nickel/cobalt efflux protein RcnA | - |
| NFG92_RS04470 (907204) | 907204..907476 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NFG92_RS04475 (907507) | 907507..908736 | - | 1230 | WP_000036841.1 | amino acid permease | - |
| NFG92_RS04480 (908878) | 908878..909333 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NFG92_RS04485 (909437) | 909437..910300 | + | 864 | WP_023227733.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|