MGE detailed information
MGE type: Genomic_island MGE length: 45652 bp
Accession: NZ_CP098829 Location: 3782965..3828616 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS6 Replicon: chromosome
Accession: NZ_CP098829 Location: 3782965..3828616 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFG92_RS18780 () | 3778536..3780980 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NFG92_RS18785 () | 3781089..3781856 | + | 768 | WP_023226791.1 | amidohydrolase | - |
| NFG92_RS18790 () | 3782227..3782634 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NFG92_RS18795 () | 3782965..3783684 | + | 720 | WP_195184473.1 | Outer membrane protein PagN | VF |
| NFG92_RS18800 () | 3783688..3783876 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| NFG92_RS18805 () | 3783912..3784045 | + | 134 | Protein_3688 | transposase | - |
| NFG92_RS18810 () | 3784647..3785264 | - | 618 | WP_133467700.1 | protein TioA | - |
| NFG92_RS18815 () | 3785404..3785859 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| NFG92_RS18820 () | 3785992..3787038 | - | 1047 | WP_223228889.1 | CfaE/CblD family pilus tip adhesin | - |
| NFG92_RS18825 () | 3787073..3789760 | - | 2688 | WP_023226795.1 | hypothetical protein | VF |
| NFG92_RS18830 () | 3789869..3790444 | - | 576 | WP_000287810.1 | CFA/I fimbrial subunit B | VF |
| NFG92_RS18835 () | 3790495..3791205 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| NFG92_RS18840 () | 3792112..3792796 | + | 685 | Protein_3695 | IS21 family transposase ISEc62 | Transposase |
| NFG92_RS18845 () | 3792836..3793022 | - | 187 | Protein_3696 | IS3 family transposase IS1351 | Transposase |
| NFG92_RS18850 () | 3793103..3793222 | - | 120 | Protein_3697 | hypothetical protein | - |
| NFG92_RS18855 () | 3793342..3794289 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NFG92_RS18860 () | 3794783..3795023 | - | 241 | Protein_3699 | PerC family transcriptional regulator | - |
| NFG92_RS18865 () | 3795106..3795927 | - | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| NFG92_RS18870 () | 3796335..3796805 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NFG92_RS18875 () | 3796827..3799337 | - | 2511 | WP_053505593.1 | F1 capsule-anchoring protein | VF |
| NFG92_RS18880 () | 3799361..3800101 | - | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| NFG92_RS18885 () | 3800176..3800673 | - | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| NFG92_RS18890 () | 3800806..3801300 | - | 495 | WP_051129373.1 | hypothetical protein | - |
| NFG92_RS18895 () | 3802068..3802614 | - | 547 | Protein_3706 | IS3 family transposase IS1351 | Transposase |
| NFG92_RS18900 () | 3802705..3803933 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| NFG92_RS18905 () | 3803959..3804105 | - | 147 | Protein_3708 | IS3 family transposase IS1351 | Transposase |
| NFG92_RS18910 () | 3804169..3804420 | + | 252 | WP_131166435.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 3804185..3804410 | - | 226 | - | - | Antitoxin Detail |
| NFG92_RS18915 () | 3804466..3804930 | - | 465 | WP_127201574.1 | hypothetical protein | - |
| NFG92_RS18920 () | 3805311..3806156 | - | 846 | Protein_3711 | hypothetical protein | VF |
| NFG92_RS18925 () | 3806176..3806313 | + | 138 | WP_023227287.1 | hypothetical protein | - |
| NFG92_RS18930 () | 3806456..3807064 | - | 609 | WP_053505599.1 | hypothetical protein | - |
| NFG92_RS18935 () | 3807065..3811189 | - | 4125 | WP_023227779.1 | RHS repeat-associated core domain-containing protein | - |
| NFG92_RS18940 () | 3811208..3811654 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| NFG92_RS18945 () | 3811678..3813867 | - | 2190 | WP_195184475.1 | hypothetical protein | VF |
| NFG92_RS18950 () | 3814264..3814785 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| NFG92_RS18955 () | 3814809..3815225 | - | 417 | WP_023227777.1 | DUF2195 family protein | - |
| NFG92_RS18960 () | 3815222..3815316 | - | 95 | Protein_3719 | cytoplasmic protein | - |
| NFG92_RS18965 () | 3815352..3815813 | - | 462 | WP_001668725.1 | hypothetical protein | - |
| NFG92_RS18970 () | 3815798..3816268 | - | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| NFG92_RS18975 () | 3816311..3817078 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| NFG92_RS18980 () | 3817078..3820947 | - | 3870 | WP_023227775.1 | hypothetical protein | VF |
| NFG92_RS18985 () | 3820981..3821412 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| NFG92_RS18990 () | 3821614..3822387 | - | 774 | WP_023227774.1 | Rap1a/Tai family immunity protein | - |
| NFG92_RS18995 () | 3822392..3823696 | - | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| NFG92_RS19000 () | 3823693..3825036 | - | 1344 | WP_023227773.1 | hypothetical protein | VF |
| NFG92_RS19005 () | 3825040..3825576 | - | 537 | WP_023227772.1 | hypothetical protein | VF |
| NFG92_RS19010 () | 3825643..3826128 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| NFG92_RS19015 () | 3826271..3826654 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NFG92_RS19020 () | 3826639..3827124 | - | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| NFG92_RS19025 () | 3827167..3827361 | - | 195 | Protein_3732 | type VI secretion system lipoprotein TssJ | - |
| NFG92_RS19030 () | 3827429..3827914 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| NFG92_RS19035 () | 3828170..3828502 | - | 333 | WP_077907151.1 | hypothetical protein | - |
| NFG92_RS19040 () | 3828629..3828787 | - | 159 | WP_001584850.1 | BPSL0067 family protein | - |
| NFG92_RS19045 () | 3828802..3830310 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NFG92_RS19050 () | 3830334..3830879 | - | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|