MGE detailed information
MGE type: Genomic_island MGE length: 11711 bp
Accession: NZ_CP098829 Location: 1052455..1064165 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS6 Replicon: chromosome
Accession: NZ_CP098829 Location: 1052455..1064165 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFG92_RS05100 (1050037) | 1050037..1050435 | + | 399 | Protein_1001 | cytoplasmic protein | - |
| NFG92_RS05105 (1051021) | 1051021..1051689 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| NFG92_RS05110 (1051716) | 1051716..1052210 | + | 495 | WP_023227564.1 | hypothetical protein | - |
| NFG92_RS05115 (1052455) | 1052455..1053111 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NFG92_RS05120 (1053446) | 1053446..1053663 | + | 218 | Protein_1005 | IS5 family transposase ISEcl3 | Transposase |
| NFG92_RS05125 (1053736) | 1053736..1054263 | - | 528 | WP_023227563.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NFG92_RS05130 (1054260) | 1054260..1054550 | - | 291 | WP_072162154.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NFG92_RS05135 (1054820) | 1054820..1054998 | - | 179 | Protein_1008 | IS3 family transposase | - |
| NFG92_RS05140 (1055239) | 1055239..1055565 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NFG92_RS05145 (1055838) | 1055838..1056185 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NFG92_RS05150 (1056170) | 1056170..1056619 | - | 450 | WP_000381610.1 | membrane protein | - |
| NFG92_RS05155 (1057050) | 1057050..1057493 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| NFG92_RS05160 (1057795) | 1057795..1058492 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| NFG92_RS05165 (1058508) | 1058508..1058852 | + | 345 | Protein_1014 | type III secretion system transcriptional activator InvF | - |
| NFG92_RS05170 (1058849) | 1058849..1060537 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NFG92_RS05175 (1060534) | 1060534..1061652 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NFG92_RS05180 (1061677) | 1061677..1063734 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NFG92_RS05185 (1063758) | 1063758..1064165 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NFG92_RS05190 (1064162) | 1064162..1065457 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NFG92_RS05195 (1065435) | 1065435..1065878 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| NFG92_RS05200 (1065878) | 1065878..1066888 | + | 1011 | WP_001619772.1 | SPI-1 type III secretion system protein SpaN | - |
| NFG92_RS05205 (1066888) | 1066888..1067799 | + | 912 | WP_000058736.1 | SPI-1 type III secretion system protein SpaO | - |
| NFG92_RS05210 (1067789) | 1067789..1068463 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NFG92_RS05215 (1068489) | 1068489..1068749 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|