MGE detailed information
MGE type: Prophage MGE length: 18258 bp
Accession: NZ_CP098724 Location: 446192..464449 Organism: Yersinia ruckeri strain NVI-10571 Replicon: chromosome
Accession: NZ_CP098724 Location: 446192..464449 Organism: Yersinia ruckeri strain NVI-10571 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND438_RS02020 (ND438_02020) | 441278..441727 | - | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
| ND438_RS02025 (ND438_02025) | 441850..443361 | - | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| ND438_RS02030 (ND438_02030) | 443641..444735 | + | 1095 | WP_004720454.1 | LPS export ABC transporter permease LptF | - |
| ND438_RS02035 (ND438_02035) | 444735..445805 | + | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| ND438_RS02045 (ND438_02045) | 446192..447115 | + | 924 | Protein_394 | Prophage integrase IntA ; Integrase | Integrase |
| ND438_RS02055 (ND438_02055) | 448531..449223 | - | 693 | WP_096823268.1 | hypothetical protein | - |
| ND438_RS02060 (ND438_02060) | 449734..451698 | + | 1965 | WP_238692870.1 | hypothetical protein | - |
| ND438_RS02065 (ND438_02065) | 452863..453807 | - | 945 | WP_038275265.1 | hypothetical protein | - |
| ND438_RS02070 (ND438_02070) | 454322..455581 | + | 1260 | Protein_399 | integrase arm-type DNA-binding domain-containing protein | - |
| ND438_RS02075 (ND438_02075) | 455755..456009 | + | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| ND438_RS02080 (ND438_02080) | 455999..456289 | + | 291 | WP_071666901.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND438_RS02085 (ND438_02085) | 456553..456942 | + | 390 | WP_096823270.1 | restriction endonuclease subunit S | - |
| ND438_RS02090 (ND438_02090) | 457066..457641 | + | 576 | WP_071706520.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| ND438_RS02095 (ND438_02095) | 457644..458300 | + | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| ND438_RS02100 (ND438_02100) | 458297..459364 | + | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| ND438_RS02105 (ND438_02105) | 459385..459651 | + | 267 | Protein_406 | hypothetical protein | - |
| ND438_RS02110 (ND438_02110) | 459726..459860 | + | 135 | Protein_407 | IS3 family transposase ISKpn37 | Transposase |
| ND438_RS02115 (ND438_02115) | 459863..460360 | + | 498 | Protein_408 | IS30 family transposase ISYkr1 | Transposase |
| ND438_RS02120 (ND438_02120) | 460366..461059 | + | 694 | Protein_409 | IS3 family transposase | - |
| ND438_RS02125 (ND438_02125) | 461369..462280 | - | 912 | WP_096823274.1 | EamA family transporter | - |
| ND438_RS02130 (ND438_02130) | 462437..463114 | + | 678 | WP_096823275.1 | hypothetical protein | - |
| ND438_RS02135 (ND438_02135) | 463282..464449 | - | 1168 | Protein_412 | IS3 family transposase ISKpn37 | Transposase |
| ND438_RS02140 (ND438_02140) | 464532..464678 | - | 147 | Protein_413 | helix-turn-helix domain-containing protein | - |
| ND438_RS02145 (ND438_02145) | 464785..464875 | + | 91 | Protein_414 | restriction endonuclease subunit M | - |
| ND438_RS02150 (ND438_02150) | 464950..465345 | + | 396 | WP_038245317.1 | DUF6088 family protein | - |
| ND438_RS02155 (ND438_02155) | 465338..466287 | + | 950 | Protein_416 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ND438_RS02160 (ND438_02160) | 466657..466782 | + | 126 | Protein_417 | antirestriction protein | - |
| ND438_RS02165 (ND438_02165) | 466808..466981 | + | 174 | Protein_418 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| ND438_RS02170 (ND438_02170) | 467583..468737 | + | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|