MGE detailed information
MGE type: Prophage MGE length: 35407 bp
Accession: NZ_CP098723 Location: 3138030..3173436 Organism: Yersinia ruckeri strain NVI-11065 Replicon: chromosome
Accession: NZ_CP098723 Location: 3138030..3173436 Organism: Yersinia ruckeri strain NVI-11065 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND444_RS14155 (ND444_14140) | 3133518..3134672 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| ND444_RS14160 (ND444_14145) | 3135275..3135448 | - | 174 | Protein_2743 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| ND444_RS14165 (ND444_14150) | 3135474..3135599 | - | 126 | Protein_2744 | antirestriction protein | - |
| ND444_RS14170 (ND444_14155) | 3135967..3136917 | - | 951 | WP_234049238.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ND444_RS14175 (ND444_14160) | 3136910..3137305 | - | 396 | WP_038245317.1 | DUF6088 family protein | - |
| ND444_RS14180 (ND444_14165) | 3137380..3137610 | - | 231 | Protein_2747 | DUF4942 domain-containing protein | - |
| ND444_RS14185 (ND444_14170) | 3137760..3137888 | + | 129 | Protein_2748 | helix-turn-helix domain-containing protein | - |
| ND444_RS14190 (ND444_14175) | 3137881..3138001 | + | 121 | Protein_2749 | transposase | - |
| ND444_RS14195 (ND444_14180) | 3138030..3138326 | - | 297 | Protein_2750 | IS3 family transposase IS1400 | Transposase |
| ND444_RS14200 (ND444_14185) | 3138325..3138723 | + | 399 | Protein_2751 | integrase core domain-containing protein | - |
| ND444_RS14205 (ND444_14190) | 3138742..3139008 | - | 267 | Protein_2752 | hypothetical protein | - |
| ND444_RS14210 (ND444_14195) | 3139029..3140096 | - | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| ND444_RS14215 (ND444_14200) | 3140093..3140749 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| ND444_RS14220 (ND444_14205) | 3140752..3141327 | - | 576 | WP_265315943.1 | DUF4433 domain-containing protein | - |
| ND444_RS14225 (ND444_14210) | 3141451..3141840 | - | 390 | WP_265315942.1 | restriction endonuclease subunit S | - |
| ND444_RS14230 (ND444_14215) | 3142104..3142394 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND444_RS14235 (ND444_14220) | 3142384..3142638 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| ND444_RS14240 (ND444_14225) | 3142812..3143207 | - | 396 | Protein_2759 | Prophage integrase IntA ; Integrase | Integrase |
| ND444_RS14245 (ND444_14230) | 3143232..3144382 | - | 1151 | Protein_2760 | IS3 family transposase ISEal1 | Transposase |
| ND444_RS14250 (ND444_14235) | 3144672..3146234 | + | 1563 | WP_265315941.1 | AAA family ATPase | - |
| ND444_RS14255 (ND444_14240) | 3146219..3147241 | + | 1023 | WP_265315940.1 | TGBp1 family protein | - |
| ND444_RS14260 (ND444_14245) | 3147387..3149828 | + | 2442 | WP_265316637.1 | DEAD/DEAH box helicase family protein | - |
| ND444_RS14265 (ND444_14250) | 3149901..3151373 | + | 1473 | WP_265315938.1 | type I restriction-modification system subunit M | - |
| ND444_RS14270 (ND444_14255) | 3151373..3153133 | + | 1761 | WP_265315937.1 | restriction endonuclease subunit S | - |
| ND444_RS14275 (ND444_14260) | 3153144..3154241 | + | 1098 | WP_265315936.1 | nuclease | - |
| ND444_RS14280 (ND444_14265) | 3154389..3155476 | + | 1088 | WP_267260602.1 | IS3 family transposase ISKpn20 | Transposase |
| ND444_RS14285 (ND444_14270) | 3155563..3158436 | + | 2874 | WP_267260604.1 | DEAD/DEAH box helicase family protein | - |
| ND444_RS14290 (ND444_14275) | 3158487..3158792 | - | 306 | WP_234054908.1 | hypothetical protein | - |
| ND444_RS14295 (ND444_14280) | 3158864..3160120 | - | 1257 | WP_265316110.1 | Prophage integrase IntA ; Integrase | Integrase |
| ND444_RS14305 (ND444_14290) | 3160507..3161577 | - | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| ND444_RS14310 (ND444_14295) | 3161577..3162671 | - | 1095 | WP_038241733.1 | LPS export ABC transporter permease LptF | - |
| ND444_RS14315 (ND444_14300) | 3162951..3164462 | + | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| ND444_RS14320 (ND444_14305) | 3164585..3165034 | + | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
| ND444_RS14325 (ND444_14310) | 3165048..3167924 | + | 2877 | WP_265316131.1 | valine--tRNA ligase | - |
| ND444_RS14330 (ND444_14315) | 3168180..3168683 | + | 504 | WP_004720447.1 | GNAT family N-acetyltransferase | - |
| ND444_RS14335 (ND444_14320) | 3168775..3169206 | - | 432 | WP_038241737.1 | ribonuclease E inhibitor RraB | - |
| ND444_RS14340 (ND444_14325) | 3169379..3170386 | + | 1008 | WP_004720443.1 | Ornithine carbamoyltransferase subunit I | VF |
| ND444_RS14345 (ND444_14330) | 3170756..3172894 | + | 2139 | WP_265316132.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| ND444_RS14350 (ND444_14335) | 3172972..3173436 | + | 465 | WP_038241742.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| ND444_RS14355 (ND444_14340) | 3173865..3174317 | + | 453 | WP_038241743.1 | phosphonate C-P lyase system protein PhnG | - |
| ND444_RS14360 (ND444_14345) | 3174317..3174898 | + | 582 | WP_038241745.1 | phosphonate C-P lyase system protein PhnH | - |
| ND444_RS14365 (ND444_14350) | 3174898..3175974 | + | 1077 | WP_145497544.1 | carbon-phosphorus lyase complex subunit PhnI | - |
| ND444_RS14370 (ND444_14355) | 3175967..3176839 | + | 873 | WP_071666626.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| ND444_RS14375 (ND444_14360) | 3176839..3177630 | + | 792 | WP_038241755.1 | phosphonate C-P lyase system protein PhnK | - |
| ND444_RS14380 (ND444_14365) | 3177672..3178391 | + | 720 | WP_038241937.1 | phosphonate C-P lyase system protein PhnL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|