MGE detailed information
MGE type: Genomic_island MGE length: 13103 bp
Accession: NZ_CP098714 Location: 2875253..2888355 Organism: Yersinia ruckeri strain NVI-1176 Replicon: chromosome
Accession: NZ_CP098714 Location: 2875253..2888355 Organism: Yersinia ruckeri strain NVI-1176 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND442_RS13310 (ND442_13305) | 2870548..2871249 | + | 702 | WP_050297207.1 | WYL domain-containing protein | - |
| ND442_RS13315 (ND442_13310) | 2871255..2871821 | + | 567 | WP_096823569.1 | hypothetical protein | - |
| ND442_RS13320 (ND442_13315) | 2871860..2872312 | + | 453 | WP_096823570.1 | hypothetical protein | - |
| ND442_RS13325 (ND442_13320) | 2872309..2872747 | + | 439 | Protein_2590 | IrmA family protein | - |
| ND442_RS13330 (ND442_13325) | 2872820..2873086 | + | 267 | Protein_2591 | DUF905 family protein | - |
| ND442_RS13335 (ND442_13330) | 2873159..2873980 | + | 822 | WP_096823571.1 | DUF932 domain-containing protein | - |
| ND442_RS13340 (ND442_13335) | 2874011..2874454 | + | 444 | WP_096823572.1 | antirestriction protein | - |
| ND442_RS13345 (ND442_13340) | 2874467..2875009 | + | 543 | WP_096823573.1 | DNA repair protein RadC | - |
| ND442_RS13350 (ND442_13345) | 2875006..2875227 | + | 222 | WP_069325310.1 | DUF987 domain-containing protein | - |
| ND442_RS13355 (ND442_13350) | 2875253..2875618 | + | 366 | WP_096823574.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ND442_RS13360 (ND442_13355) | 2875657..2875986 | + | 330 | WP_096823575.1 | TA system toxin CbtA family protein | Toxin Detail |
| ND442_RS13365 (ND442_13360) | 2876382..2877311 | + | 930 | Protein_2598 | Prophage integrase IntA ; Integrase | Integrase |
| ND442_RS13370 (ND442_13365) | 2877557..2878111 | + | 555 | WP_096823577.1 | DUF4942 domain-containing protein | - |
| ND442_RS13375 (ND442_13370) | 2878220..2878543 | + | 324 | WP_038277221.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ND442_RS13380 (ND442_13375) | 2878530..2878811 | + | 282 | WP_038277219.1 | helix-turn-helix transcriptional regulator | - |
| ND442_RS13385 (ND442_13380) | 2879020..2880560 | - | 1541 | Protein_2602 | IS3 family transposase ISKpn38 | Transposase |
| ND442_RS13390 (ND442_13385) | 2880633..2881030 | - | 398 | Protein_2603 | IS3 family transposase IS1400 | Transposase |
| ND442_RS13395 (ND442_13390) | 2881259..2881561 | + | 303 | WP_096823578.1 | hypothetical protein | - |
| ND442_RS13400 (ND442_13395) | 2881656..2882378 | + | 723 | WP_071704641.1 | Chaperone protein FimC | VF |
| ND442_RS13405 (ND442_13400) | 2882514..2885033 | + | 2520 | WP_234049469.1 | Outer membrane usher protein FimD | VF |
| ND442_RS13410 (ND442_13405) | 2885080..2885643 | + | 564 | WP_051847020.1 | S-fimbrial protein subunit SfaG | VF |
| ND442_RS13415 (ND442_13410) | 2885767..2886702 | + | 936 | WP_071704801.1 | hypothetical protein | - |
| ND442_RS13420 (ND442_13415) | 2886841..2887029 | + | 189 | Protein_2609 | helix-turn-helix domain-containing protein | - |
| ND442_RS13425 (ND442_13420) | 2887109..2887225 | - | 117 | Protein_2610 | IS21 family transposase | - |
| ND442_RS13430 (ND442_13425) | 2887429..2888355 | - | 927 | WP_038276096.1 | LysR family transcriptional regulator | - |
| ND442_RS13435 (ND442_13430) | 2888576..2888892 | + | 317 | Protein_2612 | IS3 family transposase | - |
| ND442_RS13440 (ND442_13435) | 2888889..2889005 | + | 117 | Protein_2613 | DDE-type integrase/transposase/recombinase | - |
| ND442_RS13445 (ND442_13440) | 2889577..2890155 | + | 579 | WP_071665691.1 | transposase | - |
| ND442_RS13450 (ND442_13445) | 2890269..2890919 | + | 651 | WP_052173091.1 | beta/gamma crystallin domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|