MGE detailed information
MGE type: Prophage MGE length: 7518 bp
Accession: NZ_CP098703 Location: 3124718..3132235 Organism: Yersinia ruckeri strain NVI-4840 Replicon: chromosome
Accession: NZ_CP098703 Location: 3124718..3132235 Organism: Yersinia ruckeri strain NVI-4840 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND437_RS14265 (ND437_14255) | 3120206..3121360 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| ND437_RS14270 (ND437_14260) | 3121963..3122136 | - | 174 | Protein_2773 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| ND437_RS14275 (ND437_14265) | 3122162..3122287 | - | 126 | Protein_2774 | antirestriction protein | - |
| ND437_RS14280 (ND437_14270) | 3122655..3123605 | - | 951 | WP_038275283.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ND437_RS14285 (ND437_14275) | 3123598..3123993 | - | 396 | WP_038245317.1 | DUF6088 family protein | - |
| ND437_RS14290 (ND437_14280) | 3124068..3124298 | - | 231 | Protein_2777 | DUF4942 domain-containing protein | - |
| ND437_RS14295 (ND437_14285) | 3124448..3124576 | + | 129 | Protein_2778 | helix-turn-helix domain-containing protein | - |
| ND437_RS14300 (ND437_14290) | 3124569..3124689 | + | 121 | Protein_2779 | transposase | - |
| ND437_RS14305 (ND437_14295) | 3124718..3125014 | - | 297 | Protein_2780 | IS3 family transposase IS1400 | Transposase |
| ND437_RS14310 (ND437_14300) | 3125013..3125411 | + | 399 | Protein_2781 | integrase core domain-containing protein | - |
| ND437_RS14315 (ND437_14305) | 3125430..3125696 | - | 267 | Protein_2782 | hypothetical protein | - |
| ND437_RS14320 (ND437_14310) | 3125717..3126784 | - | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| ND437_RS14325 (ND437_14315) | 3126781..3127437 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| ND437_RS14330 (ND437_14320) | 3127440..3128015 | - | 576 | WP_234049239.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| ND437_RS14335 (ND437_14325) | 3128139..3128528 | - | 390 | WP_234049240.1 | restriction endonuclease subunit S | - |
| ND437_RS14340 (ND437_14330) | 3128792..3129082 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND437_RS14345 (ND437_14335) | 3129072..3129326 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| ND437_RS14350 (ND437_14340) | 3129500..3129955 | - | 456 | Protein_2789 | Prophage integrase IntA ; Integrase | Integrase |
| ND437_RS14360 (ND437_14350) | 3131189..3132235 | - | 1047 | Protein_2791 | Prophage integrase IntA ; Integrase | Integrase |
| ND437_RS14370 (ND437_14360) | 3132622..3133692 | - | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| ND437_RS14375 (ND437_14365) | 3133692..3134786 | - | 1095 | WP_004720454.1 | LPS export ABC transporter permease LptF | - |
| ND437_RS14380 (ND437_14370) | 3135066..3136577 | + | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| ND437_RS14385 (ND437_14375) | 3136700..3137149 | + | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|