MGE detailed information
MGE type: Genomic_island MGE length: 13103 bp
Accession: NZ_CP098697 Location: 2812480..2825582 Organism: Yersinia ruckeri strain NVI-6614 Replicon: chromosome
Accession: NZ_CP098697 Location: 2812480..2825582 Organism: Yersinia ruckeri strain NVI-6614 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND449_RS12880 (ND449_12865) | 2807775..2808476 | + | 702 | WP_050297207.1 | WYL domain-containing protein | - |
| ND449_RS12885 (ND449_12870) | 2808482..2809048 | + | 567 | WP_096823569.1 | hypothetical protein | - |
| ND449_RS12890 (ND449_12875) | 2809087..2809539 | + | 453 | WP_096823570.1 | hypothetical protein | - |
| ND449_RS12895 (ND449_12880) | 2809536..2809974 | + | 439 | Protein_2499 | IrmA family protein | - |
| ND449_RS12900 (ND449_12885) | 2810047..2810313 | + | 267 | Protein_2500 | DUF905 family protein | - |
| ND449_RS12905 (ND449_12890) | 2810386..2811207 | + | 822 | WP_096823571.1 | DUF932 domain-containing protein | - |
| ND449_RS12910 (ND449_12895) | 2811238..2811681 | + | 444 | WP_096823572.1 | antirestriction protein | - |
| ND449_RS12915 (ND449_12900) | 2811694..2812236 | + | 543 | WP_096823573.1 | DNA repair protein RadC | - |
| ND449_RS12920 (ND449_12905) | 2812233..2812454 | + | 222 | WP_069325310.1 | DUF987 domain-containing protein | - |
| ND449_RS12925 (ND449_12910) | 2812480..2812845 | + | 366 | WP_096823574.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ND449_RS12930 (ND449_12915) | 2812884..2813213 | + | 330 | WP_096823575.1 | TA system toxin CbtA family protein | Toxin Detail |
| ND449_RS12935 (ND449_12920) | 2813609..2814538 | + | 930 | Protein_2507 | Prophage integrase IntA ; Integrase | Integrase |
| ND449_RS12940 (ND449_12925) | 2814784..2815338 | + | 555 | WP_096823577.1 | DUF4942 domain-containing protein | - |
| ND449_RS12945 (ND449_12930) | 2815447..2815770 | + | 324 | WP_038277221.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ND449_RS12950 (ND449_12935) | 2815757..2816038 | + | 282 | WP_038277219.1 | helix-turn-helix transcriptional regulator | - |
| ND449_RS12955 (ND449_12940) | 2816247..2817787 | - | 1541 | Protein_2511 | IS3 family transposase ISKpn38 | Transposase |
| ND449_RS12960 (ND449_12945) | 2817860..2818257 | - | 398 | Protein_2512 | IS3 family transposase IS1400 | Transposase |
| ND449_RS12965 (ND449_12950) | 2818486..2818788 | + | 303 | WP_096823578.1 | hypothetical protein | - |
| ND449_RS12970 (ND449_12955) | 2818883..2819605 | + | 723 | WP_071704641.1 | Chaperone protein FimC | VF |
| ND449_RS12975 (ND449_12960) | 2819741..2822260 | + | 2520 | WP_234049469.1 | Outer membrane usher protein FimD | VF |
| ND449_RS12980 (ND449_12965) | 2822307..2822870 | + | 564 | WP_051847020.1 | S-fimbrial protein subunit SfaG | VF |
| ND449_RS12985 (ND449_12970) | 2822994..2823929 | + | 936 | WP_071704801.1 | hypothetical protein | - |
| ND449_RS12990 (ND449_12975) | 2824068..2824256 | + | 189 | Protein_2518 | helix-turn-helix domain-containing protein | - |
| ND449_RS12995 (ND449_12980) | 2824336..2824452 | - | 117 | Protein_2519 | IS21 family transposase | - |
| ND449_RS13000 (ND449_12985) | 2824656..2825582 | - | 927 | WP_038276096.1 | LysR family transcriptional regulator | - |
| ND449_RS13005 (ND449_12990) | 2825803..2826119 | + | 317 | Protein_2521 | IS3 family transposase | - |
| ND449_RS13010 (ND449_12995) | 2826116..2826232 | + | 117 | Protein_2522 | DDE-type integrase/transposase/recombinase | - |
| ND449_RS13015 (ND449_13000) | 2826804..2827382 | + | 579 | WP_071665691.1 | transposase | - |
| ND449_RS13020 (ND449_13005) | 2827496..2828146 | + | 651 | WP_052173091.1 | beta/gamma crystallin domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|