MGE detailed information
MGE type: Prophage MGE length: 81283 bp
Accession: NZ_CP098694 Location: 529087..610369 Organism: Yersinia ruckeri strain NVI-8270 Replicon: chromosome
Accession: NZ_CP098694 Location: 529087..610369 Organism: Yersinia ruckeri strain NVI-8270 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
ND446_RS02275 (ND446_02275) | 524415..525140 | - | 726 | WP_038276271.1 | DUF1365 domain-containing protein | - |
ND446_RS02280 (ND446_02280) | 525137..526405 | - | 1269 | WP_145497027.1 | FAD-dependent oxidoreductase | - |
ND446_RS02285 (ND446_02285) | 526410..527126 | - | 717 | WP_038251156.1 | SDR family NAD(P)-dependent oxidoreductase | - |
ND446_RS02290 (ND446_02290) | 527123..527557 | - | 435 | WP_004723330.1 | nuclear transport factor 2 family protein | - |
ND446_RS02295 (ND446_02295) | 527637..527778 | - | 142 | Protein_440 | MerR family transcriptional regulator | - |
ND446_RS02300 (ND446_02300) | 527992..528381 | - | 390 | WP_004723329.1 | SHOCT domain-containing protein | - |
ND446_RS02305 (ND446_02305) | 529087..530403 | + | 1317 | WP_267262896.1 | hypothetical protein ; Integrase | Integrase |
ND446_RS02310 (ND446_02310) | 530408..531022 | + | 615 | WP_267262897.1 | Protein adenylyltransferase VbhT | VF |
ND446_RS02315 (ND446_02315) | 531019..531177 | - | 159 | WP_267262898.1 | hypothetical protein | - |
ND446_RS02320 (ND446_02320) | 531408..531833 | + | 426 | WP_267262899.1 | hypothetical protein | - |
ND446_RS02325 (ND446_02325) | 531892..533042 | + | 1151 | WP_087931031.1 | IS3 family transposase ISSpr1 | Transposase |
ND446_RS02330 (ND446_02330) | 533167..533646 | + | 480 | WP_267262900.1 | hypothetical protein | - |
ND446_RS02335 (ND446_02335) | 533754..533990 | + | 237 | WP_267262901.1 | AlpA family phage regulatory protein | - |
ND446_RS02340 (ND446_02340) | 534114..535520 | + | 1407 | WP_267262902.1 | YfjI family protein | - |
ND446_RS02345 (ND446_02345) | 535745..536365 | + | 621 | WP_267262903.1 | inovirus Gp2 family protein | - |
ND446_RS02350 (ND446_02350) | 536629..537525 | - | 897 | WP_267262904.1 | hypothetical protein | - |
ND446_RS02355 (ND446_02355) | 537522..539249 | - | 1728 | WP_267262905.1 | zinc ribbon domain-containing protein | - |
ND446_RS02360 (ND446_02360) | 539242..540480 | - | 1239 | WP_267262906.1 | N-6 DNA methylase | - |
ND446_RS02365 (ND446_02365) | 540839..541702 | + | 864 | WP_267262907.1 | GTPase family protein | - |
ND446_RS02370 (ND446_02370) | 541797..542630 | + | 834 | WP_267263002.1 | DUF932 domain-containing protein | - |
ND446_RS02375 (ND446_02375) | 542832..543536 | + | 705 | WP_267262908.1 | WYL domain-containing protein | - |
ND446_RS02380 (ND446_02380) | 543533..544147 | + | 615 | WP_267262909.1 | hypothetical protein | - |
ND446_RS02385 (ND446_02385) | 544237..544647 | + | 411 | WP_267262910.1 | hypothetical protein | - |
ND446_RS02390 (ND446_02390) | 544725..544961 | + | 237 | WP_267262911.1 | DUF905 domain-containing protein | - |
ND446_RS02395 (ND446_02395) | 545047..545505 | + | 459 | WP_267262912.1 | antirestriction protein | - |
ND446_RS02400 (ND446_02400) | 545514..545996 | + | 483 | WP_267262913.1 | DNA repair protein RadC | - |
ND446_RS02405 (ND446_02405) | 546005..546226 | + | 222 | WP_267262914.1 | DUF987 domain-containing protein | - |
ND446_RS02410 (ND446_02410) | 546245..546565 | + | 321 | WP_267262915.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
ND446_RS02415 (ND446_02415) | 546586..546927 | + | 342 | WP_267262916.1 | TA system toxin CbtA family protein | Toxin Detail |
ND446_RS02420 (ND446_02420) | 547340..547852 | + | 513 | WP_267262917.1 | hypothetical protein | - |
ND446_RS02425 (ND446_02425) | 548167..548370 | + | 204 | Protein_466 | DUF4942 domain-containing protein | - |
ND446_RS02430 (ND446_02430) | 548591..549649 | - | 1059 | WP_267262918.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
ND446_RS02435 (ND446_02435) | 549639..550601 | - | 963 | WP_267262919.1 | hypothetical protein | - |
ND446_RS02440 (ND446_02440) | 550615..551196 | - | 582 | WP_267262920.1 | phage repressor protein CI | - |
ND446_RS02445 (ND446_02445) | 551309..551530 | + | 222 | WP_050124248.1 | hypothetical protein | - |
ND446_RS02450 (ND446_02450) | 551562..552077 | + | 516 | WP_267262921.1 | phage regulatory CII family protein | - |
ND446_RS02455 (ND446_02455) | 552085..552306 | + | 222 | WP_004717258.1 | DUF2724 domain-containing protein | - |
ND446_RS02460 (ND446_02460) | 552293..552667 | + | 375 | WP_050877336.1 | hypothetical protein | - |
ND446_RS02465 (ND446_02465) | 552677..553084 | + | 408 | WP_050877337.1 | hypothetical protein | - |
ND446_RS02470 (ND446_02470) | 553163..553390 | + | 228 | WP_267262922.1 | DUF2732 family protein | - |
ND446_RS02475 (ND446_02475) | 553421..553699 | + | 279 | WP_120807129.1 | DUF5405 family protein | - |
ND446_RS02480 (ND446_02480) | 553696..555774 | + | 2079 | WP_267262923.1 | replication endonuclease | - |
ND446_RS02485 (ND446_02485) | 556067..556387 | - | 321 | WP_248578817.1 | ogr/Delta-like zinc finger family protein | - |
ND446_RS02490 (ND446_02490) | 556384..557412 | - | 1029 | WP_248577835.1 | phage portal protein | - |
ND446_RS02495 (ND446_02495) | 557409..559196 | - | 1788 | WP_267262924.1 | terminase family protein | - |
ND446_RS02500 (ND446_02500) | 559363..560211 | + | 849 | WP_120806985.1 | GPO family capsid scaffolding protein | - |
ND446_RS02505 (ND446_02505) | 560266..561297 | + | 1032 | WP_267262925.1 | phage major capsid protein, P2 family | - |
ND446_RS02510 (ND446_02510) | 561307..562005 | + | 699 | WP_120806983.1 | phage terminase small subunit | - |
ND446_RS02515 (ND446_02515) | 562099..562551 | + | 453 | WP_267262926.1 | head completion/stabilization protein | - |
ND446_RS02520 (ND446_02520) | 562548..563036 | + | 489 | WP_071706506.1 | phage tail protein | - |
ND446_RS02525 (ND446_02525) | 563036..563707 | + | 672 | WP_248577830.1 | phage virion morphogenesis protein | - |
ND446_RS02530 (ND446_02530) | 563739..564872 | + | 1134 | WP_267262927.1 | DUF2586 domain-containing protein | - |
ND446_RS02535 (ND446_02535) | 564869..565324 | + | 456 | WP_267262928.1 | DUF2597 family protein | - |
ND446_RS02540 (ND446_02540) | 565334..565621 | + | 288 | WP_071706568.1 | phage holin family protein | - |
ND446_RS02545 (ND446_02545) | 565621..565962 | + | 342 | WP_267262929.1 | M15 family metallopeptidase | - |
ND446_RS02550 (ND446_02550) | 565962..566312 | + | 351 | WP_071706611.1 | hypothetical protein | - |
ND446_RS02555 (ND446_02555) | 566236..566451 | + | 216 | WP_267263003.1 | hypothetical protein | - |
ND446_RS02560 (ND446_02560) | 566453..566719 | + | 267 | WP_071708345.1 | putative phage tail assembly chaperone | - |
ND446_RS02565 (ND446_02565) | 566907..568922 | + | 2016 | WP_267262931.1 | phage tail tape measure protein | - |
ND446_RS02570 (ND446_02570) | 568923..569255 | + | 333 | WP_071708343.1 | DUF2590 family protein | - |
ND446_RS02575 (ND446_02575) | 569248..570432 | + | 1185 | WP_265315788.1 | baseplate J/gp47 family protein | - |
ND446_RS02580 (ND446_02580) | 570425..571030 | + | 606 | WP_265315787.1 | hypothetical protein | - |
ND446_RS02585 (ND446_02585) | 571033..572886 | + | 1854 | WP_265315786.1 | phage tail protein | - |
ND446_RS02590 (ND446_02590) | 572886..573548 | + | 663 | WP_265315785.1 | tail fiber assembly protein | - |
ND446_RS02595 (ND446_02595) | 573538..574269 | + | 732 | WP_265315784.1 | hypothetical protein | - |
ND446_RS02600 (ND446_02600) | 574235..574768 | + | 534 | WP_267262932.1 | hypothetical protein | - |
ND446_RS02605 (ND446_02605) | 574774..576429 | + | 1656 | WP_267262933.1 | hypothetical protein | - |
ND446_RS02610 (ND446_02610) | 576924..577754 | - | 831 | WP_012414004.1 | abortive infection family protein | - |
ND446_RS02620 (ND446_02620) | 578238..580079 | - | 1842 | WP_004723328.1 | RNA polymerase sigma factor RpoD | - |
ND446_RS02625 (ND446_02625) | 580236..581984 | - | 1749 | WP_004723327.1 | DNA primase | - |
ND446_RS02630 (ND446_02630) | 582119..582334 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
ND446_RS02635 (ND446_02635) | 582727..583740 | + | 1014 | WP_038244918.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
ND446_RS02640 (ND446_02640) | 584036..584683 | - | 648 | WP_004721063.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
ND446_RS02645 (ND446_02645) | 584791..585150 | + | 360 | WP_004721060.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
ND446_RS02650 (ND446_02650) | 585312..586136 | + | 825 | WP_145497111.1 | undecaprenyl-diphosphate phosphatase | - |
ND446_RS02655 (ND446_02655) | 586252..587499 | - | 1248 | WP_145497110.1 | multifunctional CCA addition/repair protein | - |
ND446_RS02660 (ND446_02660) | 587642..588262 | - | 621 | WP_038244914.1 | TIGR04211 family SH3 domain-containing protein | - |
ND446_RS02665 (ND446_02665) | 588579..589889 | + | 1311 | WP_145497109.1 | inorganic triphosphatase | - |
ND446_RS02670 (ND446_02670) | 590110..592944 | + | 2835 | WP_234056830.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
ND446_RS02675 (ND446_02675) | 593228..594658 | + | 1431 | WP_038276261.1 | Bifunctional protein HldE | VF |
ND446_RS02680 (ND446_02680) | 594718..594875 | + | 158 | Protein_516 | transposase | - |
ND446_RS02685 (ND446_02685) | 595072..595362 | - | 291 | WP_267262934.1 | accessory factor UbiK family protein | - |
ND446_RS02690 (ND446_02690) | 595791..596444 | + | 654 | WP_004721039.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
ND446_RS02695 (ND446_02695) | 596707..597489 | + | 783 | WP_145497106.1 | 4,5-DOPA dioxygenase extradiol | - |
ND446_RS02700 (ND446_02700) | 597556..598716 | - | 1161 | WP_004721034.1 | glutathionylspermidine synthase family protein | - |
ND446_RS02705 (ND446_02705) | 598727..599416 | - | 690 | WP_038244950.1 | DUF1190 family protein | - |
ND446_RS02710 (ND446_02710) | 599693..601159 | - | 1467 | WP_145497105.1 | outer membrane channel protein TolC | - |
ND446_RS02715 (ND446_02715) | 601487..602125 | + | 639 | WP_004721025.1 | ADP-ribose diphosphatase | - |
ND446_RS02720 (ND446_02720) | 602118..602543 | + | 426 | WP_234055687.1 | DUF1249 family protein | - |
ND446_RS02725 (ND446_02725) | 602568..603395 | + | 828 | WP_038244900.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
ND446_RS02730 (ND446_02730) | 603395..603976 | + | 582 | WP_038244897.1 | esterase YqiA | - |
ND446_RS02735 (ND446_02735) | 604076..605971 | + | 1896 | WP_004721020.1 | DNA topoisomerase IV subunit B | - |
ND446_RS02740 (ND446_02740) | 606119..607030 | + | 912 | WP_145497103.1 | HTH-type transcriptional regulator DmlR | VF |
ND446_RS02745 (ND446_02745) | 607121..607705 | - | 585 | WP_004721017.1 | NAD(P)H-dependent oxidoreductase | - |
ND446_RS02750 (ND446_02750) | 608096..610369 | + | 2274 | WP_004721016.1 | DNA topoisomerase IV subunit A | - |
ND446_RS02755 (ND446_02755) | 610592..611326 | + | 735 | WP_038244892.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
ND446_RS02760 (ND446_02760) | 611478..612911 | + | 1434 | WP_004721013.1 | cell division protein FtsP | - |
ND446_RS02765 (ND446_02765) | 613127..615349 | + | 2223 | WP_145497102.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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