MGE detailed information
MGE type: Prophage MGE length: 20053 bp
Accession: NZ_CP098694 Location: 3124670..3144722 Organism: Yersinia ruckeri strain NVI-8270 Replicon: chromosome
Accession: NZ_CP098694 Location: 3124670..3144722 Organism: Yersinia ruckeri strain NVI-8270 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND446_RS14050 (ND446_14040) | 3120146..3121300 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| ND446_RS14055 (ND446_14045) | 3121903..3122076 | - | 174 | Protein_2719 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| ND446_RS14060 (ND446_14050) | 3122102..3122227 | - | 126 | Protein_2720 | antirestriction protein | - |
| ND446_RS14065 (ND446_14055) | 3122607..3123557 | - | 951 | WP_234055605.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ND446_RS14070 (ND446_14060) | 3123550..3123945 | - | 396 | WP_038245317.1 | DUF6088 family protein | - |
| ND446_RS14075 (ND446_14065) | 3124020..3124250 | - | 231 | Protein_2723 | DUF4942 domain-containing protein | - |
| ND446_RS14080 (ND446_14070) | 3124400..3124528 | + | 129 | Protein_2724 | helix-turn-helix domain-containing protein | - |
| ND446_RS14085 (ND446_14075) | 3124521..3124641 | + | 121 | Protein_2725 | transposase | - |
| ND446_RS14090 (ND446_14080) | 3124670..3124966 | - | 297 | Protein_2726 | IS3 family transposase IS1400 | Transposase |
| ND446_RS14095 (ND446_14085) | 3124965..3125363 | + | 399 | Protein_2727 | integrase core domain-containing protein | - |
| ND446_RS14100 (ND446_14090) | 3125382..3125648 | - | 267 | Protein_2728 | hypothetical protein | - |
| ND446_RS14105 (ND446_14095) | 3125669..3126736 | - | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| ND446_RS14110 (ND446_14100) | 3126733..3127389 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| ND446_RS14115 (ND446_14105) | 3127392..3127967 | - | 576 | WP_234049239.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| ND446_RS14120 (ND446_14110) | 3128091..3128480 | - | 390 | WP_234056964.1 | restriction endonuclease subunit S | - |
| ND446_RS14125 (ND446_14115) | 3128744..3129034 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND446_RS14130 (ND446_14120) | 3129024..3129278 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| ND446_RS14135 (ND446_14125) | 3129452..3129826 | - | 375 | Protein_2735 | Prophage integrase IntA ; Integrase | Integrase |
| ND446_RS14140 (ND446_14130) | 3129916..3131066 | + | 1151 | WP_087931031.1 | IS3 family transposase ISSpr1 | Transposase |
| ND446_RS14145 (ND446_14135) | 3131084..3131407 | - | 324 | Protein_2737 | Arm DNA-binding domain-containing protein | - |
| ND446_RS14155 (ND446_14145) | 3131793..3132863 | - | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| ND446_RS14160 (ND446_14150) | 3132863..3133957 | - | 1095 | WP_234056962.1 | LPS export ABC transporter permease LptF | - |
| ND446_RS14165 (ND446_14155) | 3134237..3135748 | + | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| ND446_RS14170 (ND446_14160) | 3135871..3136320 | + | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
| ND446_RS14175 (ND446_14165) | 3136334..3139210 | + | 2877 | WP_004720449.1 | valine--tRNA ligase | - |
| ND446_RS14180 (ND446_14170) | 3139466..3139969 | + | 504 | WP_004720447.1 | GNAT family N-acetyltransferase | - |
| ND446_RS14185 (ND446_14175) | 3140061..3140492 | - | 432 | WP_038241737.1 | ribonuclease E inhibitor RraB | - |
| ND446_RS14190 (ND446_14180) | 3140665..3141672 | + | 1008 | WP_004720443.1 | Ornithine carbamoyltransferase subunit I | VF |
| ND446_RS14195 (ND446_14185) | 3142042..3144180 | + | 2139 | WP_004720441.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| ND446_RS14200 (ND446_14190) | 3144258..3144722 | + | 465 | WP_038241742.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| ND446_RS14205 (ND446_14195) | 3145151..3145603 | + | 453 | WP_038241743.1 | phosphonate C-P lyase system protein PhnG | - |
| ND446_RS14210 (ND446_14200) | 3145603..3146184 | + | 582 | WP_038241745.1 | phosphonate C-P lyase system protein PhnH | - |
| ND446_RS14215 (ND446_14205) | 3146184..3147260 | + | 1077 | WP_145497544.1 | carbon-phosphorus lyase complex subunit PhnI | - |
| ND446_RS14220 (ND446_14210) | 3147253..3148125 | + | 873 | WP_234055611.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| ND446_RS14225 (ND446_14215) | 3148125..3148916 | + | 792 | WP_038241755.1 | phosphonate C-P lyase system protein PhnK | - |
| ND446_RS14230 (ND446_14220) | 3148958..3149677 | + | 720 | WP_038241937.1 | phosphonate C-P lyase system protein PhnL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|