MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 149912 bp
Accession: NZ_CP098604 Location: 3792278..3942189 Organism: Xanthomonas hortorum pv. pelargonii strain OSU493 Replicon: chromosome
Accession: NZ_CP098604 Location: 3792278..3942189 Organism: Xanthomonas hortorum pv. pelargonii strain OSU493 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NDY25_RS16350 (NDY25_16325) | 3787960..3788496 | - | 537 | WP_168959884.1 | hypothetical protein | - |
| NDY25_RS16355 (NDY25_16330) | 3789693..3790088 | + | 396 | WP_104552384.1 | H-NS family nucleoid-associated regulatory protein | - |
| NDY25_RS16360 (NDY25_16335) | 3790165..3790901 | - | 737 | Protein_3192 | DNA/RNA non-specific endonuclease | - |
| NDY25_RS16365 (NDY25_16340) | 3791230..3791466 | + | 237 | WP_233366555.1 | hypothetical protein | - |
| NDY25_RS16370 (NDY25_16345) | 3791565..3792526 | - | 962 | Protein_3194 | IS1595 family transposase | - |
| NDY25_RS16375 (NDY25_16350) | 3792599..3792697 | + | 99 | Protein_3195 | transposase | - |
| NDY25_RS16380 (NDY25_16355) | 3792789..3793652 | + | 864 | WP_256627568.1 | IS3 family transposase ISXca2 | Transposase |
| NDY25_RS16385 (NDY25_16360) | 3793613..3794584 | - | 972 | WP_256627569.1 | DUF692 domain-containing protein | - |
| NDY25_RS16390 (NDY25_16365) | 3794600..3796663 | - | 2064 | WP_168959872.1 | ferritin-like domain-containing protein | - |
| NDY25_RS16395 (NDY25_16370) | 3797287..3797919 | + | 633 | WP_256627570.1 | hypothetical protein | - |
| NDY25_RS16400 (NDY25_16375) | 3798027..3798701 | + | 675 | WP_168959870.1 | hypothetical protein | - |
| NDY25_RS16405 (NDY25_16380) | 3798839..3799072 | + | 234 | WP_168959869.1 | hypothetical protein | - |
| NDY25_RS16410 (NDY25_16385) | 3799165..3800232 | + | 1068 | WP_168959868.1 | ankyrin repeat domain-containing protein | - |
| NDY25_RS16415 (NDY25_16390) | 3800478..3801404 | - | 927 | WP_168959867.1 | hypothetical protein | - |
| NDY25_RS16420 (NDY25_16395) | 3801549..3803129 | - | 1581 | WP_168959866.1 | DUF4365 domain-containing protein | - |
| NDY25_RS16425 (NDY25_16400) | 3803332..3804063 | - | 732 | WP_168959865.1 | hypothetical protein | - |
| NDY25_RS16430 (NDY25_16405) | 3804078..3806276 | - | 2199 | WP_168959864.1 | DEAD/DEAH box helicase | - |
| NDY25_RS16435 (NDY25_16410) | 3806280..3806942 | - | 663 | WP_256628006.1 | DUF2791 family P-loop domain-containing protein | - |
| NDY25_RS16440 (NDY25_16415) | 3806945..3807925 | + | 981 | WP_256627481.1 | IS5 family transposase IS1646 | Transposase |
| NDY25_RS16445 (NDY25_16420) | 3808015..3808740 | - | 726 | WP_251774419.1 | DUF2791 family P-loop domain-containing protein | - |
| NDY25_RS16450 (NDY25_16425) | 3808737..3811931 | - | 3195 | WP_256627571.1 | TerB N-terminal domain-containing protein | - |
| NDY25_RS16455 (NDY25_16430) | 3812106..3814679 | + | 2574 | WP_168959862.1 | AAA family ATPase | - |
| NDY25_RS16460 (NDY25_16435) | 3815106..3816086 | + | 981 | Protein_3212 | IS5 family transposase IS1646 | Transposase |
| NDY25_RS16465 (NDY25_16440) | 3817117..3817584 | - | 468 | WP_168959860.1 | hypothetical protein | - |
| NDY25_RS16470 (NDY25_16445) | 3817658..3817906 | - | 249 | WP_168959859.1 | hypothetical protein | - |
| NDY25_RS16475 (NDY25_16450) | 3818127..3818465 | - | 339 | Protein_3215 | integrase | - |
| NDY25_RS16480 (NDY25_16455) | 3818465..3819547 | - | 1083 | WP_168959858.1 | serine/threonine-protein kinase | - |
| NDY25_RS16485 (NDY25_16460) | 3819544..3820596 | - | 1053 | WP_168959857.1 | serine/threonine-protein kinase | - |
| NDY25_RS16490 (NDY25_16465) | 3820624..3821808 | - | 1185 | WP_225970185.1 | protein phosphatase 2C domain-containing protein | - |
| NDY25_RS16495 (NDY25_16470) | 3821955..3823346 | - | 1392 | WP_168959856.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NDY25_RS16500 (NDY25_16475) | 3823445..3824589 | + | 1145 | WP_256627573.1 | IS3 family transposase ISXac3 | Transposase |
| NDY25_RS16505 (NDY25_16480) | 3825355..3826518 | + | 1164 | WP_168959854.1 | hypothetical protein | - |
| NDY25_RS16510 (NDY25_16485) | 3826543..3827181 | + | 639 | WP_251755207.1 | hypothetical protein | - |
| NDY25_RS16515 (NDY25_16490) | 3827437..3828141 | + | 705 | WP_256627574.1 | hypothetical protein | - |
| NDY25_RS16520 (NDY25_16495) | 3828224..3829114 | + | 891 | WP_251755212.1 | MobA/MobL family protein | - |
| NDY25_RS16525 (NDY25_16500) | 3829340..3829732 | - | 393 | WP_168960056.1 | hypothetical protein | - |
| NDY25_RS16530 (NDY25_16505) | 3829782..3830092 | - | 311 | Protein_3226 | hypothetical protein | - |
| NDY25_RS16535 (NDY25_16510) | 3830283..3830636 | + | 354 | WP_180336617.1 | helix-turn-helix transcriptional regulator | - |
| NDY25_RS16540 (NDY25_16515) | 3830899..3832602 | + | 1704 | WP_168960055.1 | Protein VirD4 | VF |
| NDY25_RS16545 (NDY25_16520) | 3832647..3833102 | + | 456 | WP_168960054.1 | hypothetical protein | - |
| NDY25_RS16550 (NDY25_16525) | 3833099..3836782 | + | 3684 | WP_233366659.1 | peptidoglycan-binding protein | - |
| NDY25_RS16555 (NDY25_16530) | 3837086..3838384 | + | 1299 | WP_168960053.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| NDY25_RS16560 (NDY25_16535) | 3838381..3840597 | + | 2217 | WP_251755259.1 | peptidase domain-containing ABC transporter | - |
| NDY25_RS16565 (NDY25_16540) | 3840704..3841516 | + | 813 | WP_006450247.1 | hypothetical protein | - |
| NDY25_RS16570 (NDY25_16545) | 3841557..3842081 | + | 525 | WP_168960051.1 | hypothetical protein | - |
| NDY25_RS16575 (NDY25_16550) | 3842231..3843508 | - | 1278 | WP_168960050.1 | ABC transporter permease | - |
| NDY25_RS16580 (NDY25_16555) | 3843571..3844002 | - | 432 | WP_168960049.1 | toxin-activating lysine-acyltransferase | - |
| NDY25_RS16585 (NDY25_16560) | 3843992..3845806 | - | 1815 | WP_168960048.1 | protein adenylyltransferase SelO family protein | - |
| NDY25_RS16590 (NDY25_16565) | 3846300..3847943 | + | 1644 | WP_168960047.1 | MobA/MobL family protein | - |
| NDY25_RS16595 (NDY25_16570) | 3848312..3849292 | - | 981 | WP_256627476.1 | IS5 family transposase IS1646 | Transposase |
| NDY25_RS16600 (NDY25_16575) | 3849554..3850243 | + | 690 | WP_233366544.1 | hypothetical protein | - |
| NDY25_RS16605 (NDY25_16580) | 3850348..3850809 | - | 462 | WP_256627575.1 | hypothetical protein | - |
| NDY25_RS16610 (NDY25_16585) | 3850809..3850967 | - | 159 | WP_256627576.1 | hypothetical protein | - |
| NDY25_RS16615 (NDY25_16590) | 3851124..3851573 | - | 450 | WP_168958929.1 | DUF6527 family protein | - |
| NDY25_RS16620 (NDY25_16595) | 3851570..3852754 | - | 1185 | WP_168958930.1 | ThiF family adenylyltransferase | - |
| NDY25_RS16625 (NDY25_16600) | 3852729..3853481 | - | 753 | WP_251756890.1 | multiubiquitin domain-containing protein | - |
| NDY25_RS16630 (NDY25_16605) | 3853572..3853898 | + | 327 | WP_168958932.1 | helix-turn-helix transcriptional regulator | - |
| NDY25_RS16635 (NDY25_16610) | 3853911..3854783 | + | 873 | WP_256627577.1 | ImmA/IrrE family metallo-endopeptidase | - |
| NDY25_RS16640 (NDY25_16615) | 3855077..3856291 | - | 1215 | WP_168958934.1 | MFS transporter | - |
| NDY25_RS16645 (NDY25_16620) | 3856288..3857481 | - | 1194 | WP_168958935.1 | Esterase EstB | VF |
| NDY25_RS16650 (NDY25_16625) | 3857595..3858515 | + | 921 | WP_168958936.1 | HTH-type transcriptional regulator PgrR | VF |
| NDY25_RS16655 (NDY25_16630) | 3858614..3859036 | + | 423 | WP_168958937.1 | YqaA family protein | - |
| NDY25_RS16660 (NDY25_16635) | 3859328..3861574 | - | 2247 | WP_168958938.1 | hypothetical protein | VF |
| NDY25_RS16665 (NDY25_16640) | 3862027..3862311 | + | 285 | WP_043889393.1 | hypothetical protein | - |
| NDY25_RS16670 (NDY25_16645) | 3862308..3862577 | - | 270 | WP_168958939.1 | hypothetical protein | - |
| NDY25_RS16675 (NDY25_16650) | 3862741..3863928 | - | 1188 | WP_168958940.1 | hypothetical protein | - |
| NDY25_RS16680 (NDY25_16655) | 3864183..3864578 | + | 396 | WP_168959001.1 | hypothetical protein | - |
| NDY25_RS16685 (NDY25_16660) | 3864667..3865059 | + | 393 | WP_055824272.1 | H-NS family nucleoid-associated regulatory protein | - |
| NDY25_RS16690 (NDY25_16665) | 3865416..3867548 | - | 2133 | WP_168958942.1 | glycogen debranching protein GlgX | - |
| NDY25_RS16695 (NDY25_16670) | 3868044..3868964 | + | 921 | WP_168958943.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| NDY25_RS16700 (NDY25_16675) | 3869308..3869985 | + | 678 | WP_006448355.1 | Transcriptional regulatory protein TcrA | VF |
| NDY25_RS16705 (NDY25_16680) | 3869978..3871312 | + | 1335 | WP_168958944.1 | HAMP domain-containing sensor histidine kinase | - |
| NDY25_RS16710 (NDY25_16685) | 3871461..3871952 | - | 492 | WP_168958945.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NDY25_RS16715 (NDY25_16690) | 3871949..3872239 | - | 291 | WP_168958946.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NDY25_RS16720 (NDY25_16695) | 3872315..3872716 | - | 402 | WP_168958947.1 | SymE family type I addiction module toxin | - |
| NDY25_RS16725 (NDY25_16700) | 3873248..3873871 | - | 624 | WP_168958948.1 | dephospho-CoA kinase | - |
| NDY25_RS16730 (NDY25_16705) | 3873885..3874748 | - | 864 | WP_016849610.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| NDY25_RS16735 (NDY25_16710) | 3874755..3876014 | - | 1260 | WP_168958949.1 | Type II secretion system protein F | VF |
| NDY25_RS16740 (NDY25_16715) | 3876365..3876790 | + | 426 | WP_168958950.1 | Fimbrial protein | VF |
| NDY25_RS16745 (NDY25_16720) | 3877096..3877548 | + | 453 | WP_256627580.1 | hypothetical protein | - |
| NDY25_RS16750 (NDY25_16725) | 3877539..3878510 | + | 972 | WP_256627581.1 | phosphoethanolamine transferase | - |
| NDY25_RS16755 (NDY25_16730) | 3878562..3879149 | + | 588 | WP_256627582.1 | hypothetical protein | - |
| NDY25_RS16760 (NDY25_16735) | 3879146..3879607 | + | 462 | WP_256627583.1 | hypothetical protein | - |
| NDY25_RS16765 (NDY25_16740) | 3879903..3880652 | + | 750 | WP_251757043.1 | hypothetical protein | - |
| NDY25_RS16770 (NDY25_16745) | 3880687..3882423 | + | 1737 | WP_256628007.1 | hypothetical protein | VF |
| NDY25_RS16775 (NDY25_16750) | 3882432..3883049 | - | 618 | WP_168958955.1 | putative protein adenylyltransferase Fic | VF |
| NDY25_RS16780 (NDY25_16755) | 3883046..3883228 | - | 183 | WP_074066024.1 | YhfG family protein | - |
| NDY25_RS16785 (NDY25_16760) | 3883302..3884696 | - | 1395 | WP_074058079.1 | Regulatory protein AtoC | VF |
| NDY25_RS16790 (NDY25_16765) | 3884842..3886455 | - | 1614 | WP_168958956.1 | Adaptive-response sensory-kinase SasA | VF |
| NDY25_RS16795 (NDY25_16770) | 3886687..3887856 | + | 1170 | WP_006450728.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| NDY25_RS16800 (NDY25_16775) | 3887881..3888756 | + | 876 | WP_006450729.1 | succinate--CoA ligase subunit alpha | - |
| NDY25_RS16805 (NDY25_16780) | 3888939..3889745 | - | 807 | WP_256627584.1 | HTH-type transcriptional regulator DmlR | VF |
| NDY25_RS16810 (NDY25_16785) | 3889962..3890138 | + | 177 | WP_218974074.1 | hypothetical protein | - |
| NDY25_RS16815 (NDY25_16790) | 3890202..3890606 | + | 405 | WP_218974075.1 | hypothetical protein | - |
| NDY25_RS16820 (NDY25_16795) | 3891028..3891849 | + | 822 | WP_233366546.1 | MBL fold metallo-hydrolase | - |
| NDY25_RS16825 (NDY25_16800) | 3891854..3892249 | + | 396 | WP_168958959.1 | nuclear transport factor 2 family protein | - |
| NDY25_RS16830 (NDY25_16805) | 3892742..3894382 | + | 1641 | WP_168958960.1 | NAD+ synthase | - |
| NDY25_RS16835 (NDY25_16810) | 3894376..3895353 | - | 978 | WP_168958961.1 | hypothetical protein | - |
| NDY25_RS16840 (NDY25_16815) | 3895699..3896580 | - | 882 | WP_168958962.1 | outer membrane protein assembly factor BamD | - |
| NDY25_RS16845 (NDY25_16820) | 3896700..3897695 | + | 996 | WP_168958963.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| NDY25_RS16850 (NDY25_16825) | 3897697..3898512 | + | 816 | WP_168958964.1 | peptidoglycan editing factor PgeF | - |
| NDY25_RS16855 (NDY25_16830) | 3898515..3899039 | + | 525 | WP_168958965.1 | DUF4166 domain-containing protein | - |
| NDY25_RS16860 (NDY25_16835) | 3899155..3899580 | + | 426 | WP_168958966.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| NDY25_RS16865 (NDY25_16840) | 3899842..3901710 | - | 1869 | WP_168958967.1 | hypothetical protein | VF |
| NDY25_RS16870 (NDY25_16845) | 3902144..3904582 | - | 2439 | WP_180336570.1 | glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase | - |
| NDY25_RS16875 (NDY25_16850) | 3905191..3906558 | - | 1368 | WP_023904889.1 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | - |
| NDY25_RS16880 (NDY25_16855) | 3906555..3908333 | - | 1779 | WP_168958969.1 | glycoside hydrolase family 15 protein | - |
| NDY25_RS16885 (NDY25_16860) | 3908380..3909138 | - | 759 | WP_168958970.1 | trehalose-phosphatase | - |
| NDY25_RS16890 (NDY25_16865) | 3909373..3911806 | - | 2434 | Protein_3298 | TonB-dependent receptor | - |
| NDY25_RS16895 (NDY25_16870) | 3912035..3912508 | + | 474 | WP_168958972.1 | DUF3574 domain-containing protein | - |
| NDY25_RS16900 (NDY25_16875) | 3912544..3913404 | + | 861 | WP_233366554.1 | hypothetical protein | - |
| NDY25_RS16905 (NDY25_16880) | 3913552..3915153 | + | 1602 | WP_168958974.1 | hypothetical protein | - |
| NDY25_RS16910 (NDY25_16885) | 3915150..3916319 | + | 1170 | WP_168958975.1 | lysozyme inhibitor LprI family protein | - |
| NDY25_RS16915 (NDY25_16890) | 3916717..3917532 | + | 816 | WP_168958976.1 | DUF3014 domain-containing protein | - |
| NDY25_RS16920 (NDY25_16895) | 3917678..3918385 | - | 708 | WP_168958977.1 | glutathione S-transferase | - |
| NDY25_RS16925 (NDY25_16900) | 3918431..3918739 | - | 309 | WP_168958978.1 | GIY-YIG nuclease family protein | - |
| NDY25_RS16930 (NDY25_16905) | 3919109..3921268 | + | 2160 | WP_168959002.1 | TonB-dependent receptor | - |
| NDY25_RS16935 (NDY25_16910) | 3921333..3922661 | + | 1329 | WP_168958979.1 | LLM class flavin-dependent oxidoreductase | - |
| NDY25_RS16940 (NDY25_16915) | 3922678..3923718 | + | 1041 | WP_168958980.1 | L-glyceraldehyde 3-phosphate reductase | - |
| NDY25_RS16945 (NDY25_16920) | 3923730..3924713 | + | 984 | WP_256627585.1 | aliphatic sulfonate ABC transporter substrate-binding protein | - |
| NDY25_RS16950 (NDY25_16925) | 3924821..3925615 | + | 795 | WP_168958982.1 | aliphatic sulfonate ABC transporter permease SsuC | - |
| NDY25_RS16955 (NDY25_16930) | 3925612..3926448 | + | 837 | WP_233366549.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| NDY25_RS16960 (NDY25_16935) | 3926672..3929257 | + | 2586 | WP_046932802.1 | Chaperone protein ClpB | VF |
| NDY25_RS16965 (NDY25_16940) | 3929471..3930757 | + | 1287 | WP_256627586.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NDY25_RS16970 (NDY25_16945) | 3931959..3933836 | + | 1878 | WP_168958984.1 | TonB-dependent vitamin B12 receptor | - |
| NDY25_RS16975 (NDY25_16950) | 3933867..3934034 | + | 168 | WP_256628026.1 | hypothetical protein | - |
| NDY25_RS16980 (NDY25_16955) | 3934030..3934441 | + | 412 | Protein_3316 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| NDY25_RS16985 (NDY25_16960) | 3934438..3935484 | + | 1047 | WP_256627587.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| NDY25_RS16990 (NDY25_16965) | 3935481..3935675 | + | 195 | Protein_3318 | histidine phosphatase family protein | - |
| NDY25_RS16995 (NDY25_16970) | 3935786..3936676 | + | 891 | WP_256627588.1 | GyrI-like domain-containing protein | - |
| NDY25_RS17000 (NDY25_16975) | 3936887..3938329 | - | 1443 | WP_168958987.1 | glycoside hydrolase family 6 protein | - |
| NDY25_RS17005 (NDY25_16980) | 3938610..3939365 | - | 756 | WP_233366551.1 | hypothetical protein | - |
| NDY25_RS17010 (NDY25_16985) | 3939946..3940513 | + | 568 | Protein_3322 | IS5 family transposase IS1421 | Transposase |
| NDY25_RS17015 (NDY25_16990) | 3940574..3941794 | - | 1221 | WP_168958988.1 | type III PLP-dependent enzyme | - |
| NDY25_RS17020 (NDY25_16995) | 3941791..3943560 | - | 1770 | WP_168958989.1 | IucA/IucC family protein | - |
| NDY25_RS17025 (NDY25_17000) | 3943538..3944746 | - | 1209 | WP_168958990.1 | MFS transporter | - |
| NDY25_RS17030 (NDY25_17005) | 3944743..3946545 | - | 1803 | WP_168958991.1 | IucA/IucC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|