MGE detailed information
MGE type: Conjugative plasmid MGE length: 113639 bp
Accession: NZ_CP098358 Location: 1..113639 Organism: Klebsiella pneumoniae strain 13001 Replicon: plasmid p13001-QIL
Accession: NZ_CP098358 Location: 1..113639 Organism: Klebsiella pneumoniae strain 13001 Replicon: plasmid p13001-QIL
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB672_RS28190 (NB672_28190) | 1..897 | + | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| NB672_RS28195 (NB672_28195) | 1219..2424 | + | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| NB672_RS28200 (NB672_28200) | 2421..3395 | + | 975 | WP_004152348.1 | ParB family protein | - |
| NB672_RS28205 (NB672_28205) | 3772..4104 | + | 333 | WP_004152347.1 | hypothetical protein | - |
| NB672_RS28210 (NB672_28210) | 4329..4544 | + | 216 | WP_004227314.1 | hypothetical protein | - |
| NB672_RS28215 (NB672_28215) | 4656..6683 | + | 2028 | WP_004152345.1 | class I SAM-dependent DNA methyltransferase | - |
| NB672_RS28220 (NB672_28220) | 6680..7996 | + | 1317 | WP_004152344.1 | restriction endonuclease subunit S | - |
| NB672_RS28225 (NB672_28225) | 7997..11254 | + | 3258 | WP_004152343.1 | DEAD/DEAH box helicase family protein | - |
| NB672_RS28230 (NB672_28230) | 11259..12527 | + | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| NB672_RS28235 (NB672_28235) | 12647..13120 | + | 474 | WP_004152341.1 | YkgJ family cysteine cluster protein | - |
| NB672_RS28240 (NB672_28240) | 13212..13442 | + | 231 | WP_011977773.1 | hypothetical protein | - |
| NB672_RS28245 (NB672_28245) | 14334..15116 | - | 783 | WP_004152340.1 | site-specific integrase | - |
| NB672_RS28250 (NB672_28250) | 15116..15448 | - | 333 | WP_004152339.1 | hypothetical protein | - |
| NB672_RS28255 (NB672_28255) | 15455..15853 | - | 399 | WP_004171440.1 | hypothetical protein | - |
| NB672_RS28260 (NB672_28260) | 15879..16208 | - | 330 | WP_004152337.1 | hypothetical protein | - |
| NB672_RS28265 (NB672_28265) | 16236..16544 | - | 309 | WP_004152336.1 | hypothetical protein | - |
| NB672_RS28270 (NB672_28270) | 16590..16796 | - | 207 | WP_004153649.1 | hypothetical protein | - |
| NB672_RS28275 (NB672_28275) | 17031..17492 | - | 462 | WP_072093212.1 | hypothetical protein | - |
| NB672_RS28280 (NB672_28280) | 17449..17679 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NB672_RS28285 (NB672_28285) | 17676..18092 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NB672_RS28290 (NB672_28290) | 18166..18855 | + | 690 | Protein_20 | AAA family ATPase | - |
| NB672_RS28295 (NB672_28295) | 18910..19607 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| NB672_RS28300 (NB672_28300) | 19623..19733 | + | 111 | Protein_22 | mercuric transport protein periplasmic component | - |
| NB672_RS28305 (NB672_28305) | 19769..20191 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NB672_RS28310 (NB672_28310) | 20243..21937 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NB672_RS28315 (NB672_28315) | 21955..22317 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NB672_RS28320 (NB672_28320) | 22314..22550 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NB672_RS28325 (NB672_28325) | 22586..23254 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NB672_RS28330 (NB672_28330) | 23329..24579 | + | 1251 | Protein_28 | transposase | - |
| NB672_RS28335 (NB672_28335) | 24644..25015 | + | 372 | Protein_29 | IS6 family transposase IS15DII | Transposase |
| NB672_RS28340 (NB672_28340) | 25165..26025 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NB672_RS28345 (NB672_28345) | 26208..26525 | - | 318 | Protein_31 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NB672_RS28350 (NB672_28350) | 26725..27549 | - | 825 | Protein_32 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NB672_RS28355 (NB672_28355) | 27609..27719 | - | 111 | Protein_33 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| NB672_RS28360 (NB672_28360) | 27769..28473 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NB672_RS28365 (NB672_28365) | 28546..31443 | + | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NB672_RS28370 (NB672_28370) | 31532..32152 | + | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NB672_RS28375 (NB672_28375) | 32251..32661 | + | 411 | WP_004152401.1 | hypothetical protein | - |
| NB672_RS28380 (NB672_28380) | 33318..33677 | - | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NB672_RS28385 (NB672_28385) | 33849..34079 | - | 231 | Protein_39 | IS5 family transposase ISAeme7 | Transposase |
| NB672_RS28390 (NB672_28390) | 34181..35365 | + | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NB672_RS28395 (NB672_28395) | 35642..36961 | + | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NB672_RS28400 (NB672_28400) | 37211..38092 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NB672_RS28405 (NB672_28405) | 38380..39159 | - | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NB672_RS28410 (NB672_28410) | 39156..40181 | - | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NB672_RS28415 (NB672_28415) | 40288..43317 | - | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NB672_RS28420 (NB672_28420) | 43427..45142 | + | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NB672_RS28425 (NB672_28425) | 45437..45592 | + | 156 | WP_001404092.1 | hypothetical protein | - |
| NB672_RS28430 (NB672_28430) | 45641..46633 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| NB672_RS28435 (NB672_28435) | 46690..46821 | + | 132 | Protein_49 | ISNCY family transposase | - |
| NB672_RS28440 (NB672_28440) | 47030..47641 | - | 612 | WP_004152389.1 | DUF2913 family protein | - |
| NB672_RS28445 (NB672_28445) | 47625..48188 | - | 564 | WP_004152388.1 | ProQ/FINO family protein | - |
| NB672_RS28450 (NB672_28450) | 49407..50264 | - | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| NB672_RS28455 (NB672_28455) | 50566..50835 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| NB672_RS28460 (NB672_28460) | 50953..51504 | - | 552 | WP_004152384.1 | Cardiolipin synthase A | VF |
| NB672_RS28465 (NB672_28465) | 51608..51916 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| NB672_RS28470 (NB672_28470) | 51913..52563 | - | 651 | WP_004152382.1 | DUF2726 domain-containing protein | - |
| NB672_RS28475 (NB672_28475) | 52619..53263 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| NB672_RS28480 (NB672_28480) | 53313..53915 | - | 603 | WP_015060010.1 | PIN domain-containing protein | - |
| NB672_RS28485 (NB672_28485) | 54076..54669 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| NB672_RS28490 (NB672_28490) | 54741..55466 | - | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NB672_RS28495 (NB672_28495) | 55547..60808 | - | 5262 | WP_004153015.1 | Multifunctional conjugation protein TraI | Relaxase |
| NB672_RS28500 (NB672_28500) | 60808..63120 | - | 2313 | WP_004152620.1 | type IV conjugative transfer system coupling protein TraD | - |
| NB672_RS28505 (NB672_28505) | 63249..63938 | - | 690 | WP_004198206.1 | hypothetical protein | - |
| NB672_RS28510 (NB672_28510) | 64130..64861 | - | 732 | WP_004152622.1 | conjugal transfer complement resistance protein TraT | - |
| NB672_RS28515 (NB672_28515) | 65045..65593 | - | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| NB672_RS28520 (NB672_28520) | 65606..68455 | - | 2850 | WP_004152624.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NB672_RS28525 (NB672_28525) | 68455..69834 | - | 1380 | WP_004165169.1 | conjugal transfer pilus assembly protein TraH | - |
| NB672_RS28530 (NB672_28530) | 69812..70255 | - | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| NB672_RS28535 (NB672_28535) | 70301..70858 | - | 558 | WP_004152678.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NB672_RS28540 (NB672_28540) | 70830..71069 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NB672_RS28545 (NB672_28545) | 71080..71832 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NB672_RS28550 (NB672_28550) | 71853..72179 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| NB672_RS28555 (NB672_28555) | 72192..72440 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| NB672_RS28560 (NB672_28560) | 72418..72672 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NB672_RS28565 (NB672_28565) | 72704..74659 | - | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NB672_RS28570 (NB672_28570) | 74718..75356 | - | 639 | WP_004152682.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NB672_RS28575 (NB672_28575) | 75369..76358 | - | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| NB672_RS28580 (NB672_28580) | 76355..76744 | - | 390 | WP_004152508.1 | hypothetical protein | - |
| NB672_RS28585 (NB672_28585) | 76786..77412 | - | 627 | WP_004152507.1 | type-F conjugative transfer system protein TraW | - |
| NB672_RS28590 (NB672_28590) | 77412..77801 | - | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| NB672_RS28595 (NB672_28595) | 77801..80440 | - | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| NB672_RS28600 (NB672_28600) | 80512..80910 | - | 399 | WP_011977783.1 | hypothetical protein | - |
| NB672_RS28605 (NB672_28605) | 80918..81307 | - | 390 | WP_004153076.1 | hypothetical protein | - |
| NB672_RS28610 (NB672_28610) | 81350..81754 | - | 405 | WP_004152503.1 | hypothetical protein | - |
| NB672_RS28615 (NB672_28615) | 81821..82132 | - | 312 | WP_004152502.1 | hypothetical protein | - |
| NB672_RS28620 (NB672_28620) | 82133..82351 | - | 219 | WP_004152501.1 | hypothetical protein | - |
| NB672_RS28625 (NB672_28625) | 82457..82867 | - | 411 | WP_004152499.1 | hypothetical protein | - |
| NB672_RS28630 (NB672_28630) | 82999..83583 | - | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NB672_RS28635 (NB672_28635) | 83697..85121 | - | 1425 | WP_004155033.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NB672_RS28640 (NB672_28640) | 85121..85861 | - | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| NB672_RS28645 (NB672_28645) | 85848..86414 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| NB672_RS28650 (NB672_28650) | 86434..86739 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| NB672_RS28655 (NB672_28655) | 86753..87121 | - | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| NB672_RS28660 (NB672_28660) | 87175..87561 | - | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| NB672_RS28665 (NB672_28665) | 87640..88326 | - | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| NB672_RS28670 (NB672_28670) | 88500..88898 | - | 399 | WP_004152493.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NB672_RS28675 (NB672_28675) | 89320..89805 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| NB672_RS28680 (NB672_28680) | 89838..90167 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| NB672_RS28685 (NB672_28685) | 90200..91021 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| NB672_RS28690 (NB672_28690) | 91841..92674 | - | 834 | WP_004152751.1 | N-6 DNA methylase | - |
| NB672_RS28695 (NB672_28695) | 92725..92871 | - | 147 | WP_004152750.1 | hypothetical protein | - |
| NB672_RS28700 (NB672_28700) | 92966..93313 | - | 348 | WP_004152749.1 | hypothetical protein | - |
| NB672_RS28705 (NB672_28705) | 93370..93723 | - | 354 | WP_004152748.1 | hypothetical protein | - |
| NB672_RS28710 (NB672_28710) | 94353..94703 | - | 351 | WP_004153414.1 | hypothetical protein | - |
| NB672_RS28715 (NB672_28715) | 94700..94972 | - | 273 | WP_004152661.1 | hypothetical protein | - |
| NB672_RS28720 (NB672_28720) | 95020..95379 | - | 360 | WP_004152660.1 | hypothetical protein | - |
| NB672_RS28725 (NB672_28725) | 95490..95813 | - | 324 | WP_004199367.1 | hypothetical protein | - |
| NB672_RS28730 (NB672_28730) | 95817..96539 | - | 723 | WP_004152658.1 | plasmid SOS inhibition protein A | - |
| NB672_RS28735 (NB672_28735) | 96536..96967 | - | 432 | WP_004152657.1 | conjugation system SOS inhibitor PsiB | - |
| NB672_RS28740 (NB672_28740) | 97013..99022 | - | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| NB672_RS28745 (NB672_28745) | 99091..99333 | - | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| NB672_RS28750 (NB672_28750) | 99381..99893 | - | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| NB672_RS28755 (NB672_28755) | 100724..101287 | - | 564 | WP_004152756.1 | methyltransferase | - |
| NB672_RS28760 (NB672_28760) | 101335..102690 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| NB672_RS28765 (NB672_28765) | 102742..102972 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| NB672_RS28770 (NB672_28770) | 103064..103291 | - | 228 | WP_004152790.1 | hypothetical protein | - |
| NB672_RS28775 (NB672_28775) | 104075..104392 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| NB672_RS28780 (NB672_28780) | 104427..104681 | - | 255 | WP_004152357.1 | DNA polymerase III subunit theta | - |
| NB672_RS28785 (NB672_28785) | 104869..105060 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| NB672_RS28790 (NB672_28790) | 105103..105609 | - | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| NB672_RS28795 (NB672_28795) | 105652..106080 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| NB672_RS28800 (NB672_28800) | 106760..107527 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| NB672_RS28805 (NB672_28805) | 107581..108000 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NB672_RS28810 (NB672_28810) | 108010..108231 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| NB672_RS28815 (NB672_28815) | 108231..108932 | - | 702 | WP_004152355.1 | DNA methylase | - |
| NB672_RS28820 (NB672_28820) | 109004..109173 | - | 170 | Protein_126 | hypothetical protein | - |
| NB672_RS28825 (NB672_28825) | 109369..109599 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| NB672_RS28830 (NB672_28830) | 109660..110331 | - | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| NB672_RS28835 (NB672_28835) | 110334..111305 | - | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| NB672_RS28840 (NB672_28840) | 111537..111968 | + | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NB672_RS28845 (NB672_28845) | 111968..113239 | + | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|