NZ_CP0983461..167851

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167851 bp
Accession: NZ_CP098346        Location: 1..167851         Organism: Klebsiella pneumoniae strain 53009_G1       Replicon: plasmid p53009-167.9


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NB668_RS28115 (NB668_28110) 1..1011 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
NB668_RS28120 (NB668_28115) 1728..2468 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
NB668_RS28125 (NB668_28120) 3612..4559 + 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
NB668_RS28130 (NB668_28125) 4586..4897 - 312 WP_071527918.1 EAL domain-containing protein -
NB668_RS28135 (NB668_28130) 4917..5885 + 969 WP_011977741.1 IS5 family transposase IS903B Transposase
NB668_RS28140 (NB668_28135) 6558..6815 - 258 WP_004197688.1 hypothetical protein -
NB668_RS28145 (NB668_28140) 7456..7971 + 516 Protein_6 putative cyclic di-GMP phosphodiesterase PdeB VF
NB668_RS28150 (NB668_28145) 8035..8871 + 837 WP_004152068.1 putative cyclic di-GMP phosphodiesterase PdeB VF
NB668_RS28155 (NB668_28150) 9674..10654 - 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
NB668_RS28160 (NB668_28155) 11054..12331 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
NB668_RS28165 (NB668_28160) 12394..14391 - 1998 WP_004178088.1 choline BCCT transporter BetT -
NB668_RS28180 (NB668_28175) 16729..17213 + 485 Protein_13 IS1 family transposase IS1X2 Transposase
NB668_RS28185 (NB668_28180) 17229..17771 + 543 Protein_14 ISL3 family transposase ISKpn25 Transposase
NB668_RS28190 (NB668_28185) 18067..18498 - 432 WP_004178091.1 silver-binding protein SilE -
NB668_RS28195 (NB668_28190) 18749..20224 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
NB668_RS28200 (NB668_28195) 20217..20897 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
NB668_RS28205 (NB668_28200) 21087..22472 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
NB668_RS28210 (NB668_28205) 22501..22854 + 354 WP_001246153.1 cation efflux system protein CusF -
NB668_RS28215 (NB668_28210) 22968..24260 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
NB668_RS28220 (NB668_28215) 24271..27417 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
NB668_RS28225 (NB668_28220) 27504..27944 + 441 WP_000758228.1 DUF411 domain-containing protein -
NB668_RS28230 (NB668_28225) 28071..30518 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
NB668_RS28235 (NB668_28230) 30559..30756 + 198 WP_000843497.1 DUF2933 domain-containing protein -
NB668_RS28240 (NB668_28235) 30790..31527 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
NB668_RS28245 (NB668_28240) 31816..32265 - 450 WP_001023257.1 copper resistance protein -
NB668_RS28250 (NB668_28245) 32499..34316 + 1818 WP_004152083.1 multicopper oxidase PcoA -
NB668_RS28255 (NB668_28250) 34322..35212 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
NB668_RS28260 (NB668_28255) 35252..35632 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
NB668_RS28265 (NB668_28260) 35637..36566 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
NB668_RS28270 (NB668_28265) 36621..37301 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
NB668_RS28275 (NB668_28270) 37298..38698 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
NB668_RS28280 (NB668_28275) 38915..39349 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
NB668_RS28285 (NB668_28280) 39581..39760 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
NB668_RS28290 (NB668_28285) 39821..41441 - 1621 Protein_35 ISL3 family transposase -
NB668_RS28295 (NB668_28290) 41503..42012 + 510 WP_031944101.1 aquaporin -
NB668_RS28300 (NB668_28295) 42062..42559 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
NB668_RS28305 (NB668_28300) 42891..43217 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
NB668_RS28310 (NB668_28305) 43214..43927 + 714 WP_004152093.1 arsenical resistance protein ArsH -
NB668_RS28315 (NB668_28310) 43936..44481 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
NB668_RS28320 (NB668_28315) 44557..44919 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
NB668_RS28325 (NB668_28320) 44938..46694 + 1757 Protein_42 arsenical pump-driving ATPase -
NB668_RS28330 (NB668_28325) 46816..47352 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
NB668_RS28335 (NB668_28330) 47385..47810 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
NB668_RS28340 (NB668_28335) 47823..49112 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
NB668_RS28345 (NB668_28340) 49160..50911 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
NB668_RS28350 (NB668_28345) 50929..51291 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
NB668_RS28355 (NB668_28350) 51341..51691 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
NB668_RS28360 (NB668_28355) 52049..52318 + 270 WP_004152102.1 hypothetical protein -
NB668_RS28365 (NB668_28360) 52306..52881 + 576 WP_004152103.1 hypothetical protein -
NB668_RS28370 (NB668_28365) 52912..53406 + 495 WP_004152104.1 DNA-binding protein -
NB668_RS28375 (NB668_28370) 53450..53818 + 369 WP_004152105.1 hypothetical protein -
NB668_RS28380 (NB668_28375) 53852..54055 + 204 WP_004152106.1 HHA domain-containing protein -
NB668_RS28385 (NB668_28380) 54104..54361 + 258 WP_004152107.1 hypothetical protein -
NB668_RS28390 (NB668_28385) 54437..54691 + 255 WP_004152108.1 hypothetical protein -
NB668_RS28395 (NB668_28390) 54867..55133 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
NB668_RS28400 (NB668_28395) 55121..55603 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
NB668_RS28405 (NB668_28400) 55815..57161 + 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
NB668_RS29030 57322..57453 + 132 WP_004218042.1 hypothetical protein -
NB668_RS28410 (NB668_28405) 57662..58827 - 1166 Protein_60 IS3 family transposase ISKpn38 Transposase
NB668_RS28415 (NB668_28410) 59004..59966 - 963 WP_004152113.1 zinc metalloprotease HtpX -
NB668_RS28420 (NB668_28415) 59953..60441 - 489 WP_004152114.1 phosphate-starvation-inducible PsiE family protein -
NB668_RS28425 (NB668_28420) 60556..60702 - 147 Protein_63 diguanylate cyclase -
NB668_RS28430 (NB668_28425) 60940..61137 - 198 WP_004152115.1 hypothetical protein -
NB668_RS28435 (NB668_28430) 61137..63932 - 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
NB668_RS28440 (NB668_28435) 64047..64616 - 570 WP_004152117.1 hypothetical protein VF
NB668_RS28445 (NB668_28440) 64651..64932 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
NB668_RS28450 (NB668_28445) 65176..65439 - 264 WP_004118208.1 hypothetical protein -
NB668_RS28455 (NB668_28450) 65454..65717 + 264 WP_004118209.1 transposase -
NB668_RS28460 (NB668_28455) 65662..65778 + 117 Protein_70 transposase domain-containing protein -
NB668_RS28465 (NB668_28460) 65963..66660 + 698 WP_223174644.1 IS1 family transposase IS1X2 Transposase
NB668_RS28470 (NB668_28465) 66919..67899 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
NB668_RS28475 (NB668_28470) 68481..69000 - 520 Protein_73 IS5 family transposase ISPst7 Transposase
NB668_RS28480 (NB668_28475) 69108..69977 - 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
NB668_RS28485 (NB668_28480) 69971..70981 - 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
NB668_RS28490 (NB668_28485) 70990..71817 - 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
NB668_RS28495 (NB668_28490) 71826..72689 - 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
NB668_RS28500 (NB668_28495) 72686..73513 - 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
NB668_RS28505 (NB668_28500) 73855..74163 + 309 Protein_79 IS5 family transposase ISThi1 Transposase
NB668_RS28510 (NB668_28505) 74369..75073 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NB668_RS28515 (NB668_28510) 75146..78043 + 2898 WP_004152403.1 Tn3 family transposase TnpA_Tn5403 Transposase
NB668_RS28520 (NB668_28515) 78132..78752 + 621 WP_004152402.1 Tn3 family transposase TnpR_TnEc1 Transposase
NB668_RS28525 (NB668_28520) 78851..79261 + 411 WP_004152401.1 hypothetical protein -
NB668_RS28530 (NB668_28525) 79918..80277 - 360 WP_004152400.1 DUF305 domain-containing protein -
NB668_RS28535 (NB668_28530) 80449..80679 - 231 Protein_85 IS5 family transposase ISAeme7 Transposase
NB668_RS28540 (NB668_28535) 80781..81965 + 1185 WP_004152398.1 ISAs1 family transposase ISKpn31 Transposase
NB668_RS28545 (NB668_28540) 82242..83561 + 1320 WP_004152397.1 IS1182 family transposase ISKpn6 Transposase
NB668_RS28550 (NB668_28545) 83811..84692 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
NB668_RS28555 (NB668_28550) 84980..85759 - 780 WP_004152394.1 IS21 family transposase ISKpn7 Transposase
NB668_RS28560 (NB668_28555) 85756..86781 - 1026 WP_004199214.1 IS21 family transposase ISKpn7 Transposase
NB668_RS28565 (NB668_28560) 86888..89917 - 3030 WP_004152392.1 Tn3 family transposase ISPsy42 Transposase
NB668_RS28570 (NB668_28565) 90027..91742 + 1716 WP_087855683.1 Tn3-like element Tn4401 family resolvase TnpR -
NB668_RS28575 (NB668_28570) 92037..92192 + 156 WP_001404092.1 hypothetical protein -
NB668_RS28580 (NB668_28575) 92241..93233 + 993 WP_001145103.1 hypothetical protein -
NB668_RS28585 (NB668_28580) 93290..93421 + 132 Protein_95 hypothetical protein VF
NB668_RS28590 (NB668_28585) 93632..95011 + 1380 Protein_96 helicase-related protein -
NB668_RS28595 (NB668_28590) 96458..97315 - 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
NB668_RS28600 (NB668_28595) 97602..97880 - 279 WP_004199332.1 replication regulatory protein RepA -
NB668_RS28605 (NB668_28600) 98201..98752 - 552 WP_004152294.1 Phospholipase D VF
NB668_RS28610 (NB668_28605) 98857..98937 - 81 Protein_100 hypothetical protein -
NB668_RS28615 (NB668_28610) 99021..99299 - 279 WP_004152296.1 bacteriocin immunity protein -
NB668_RS28620 (NB668_28615) 99301..101622 - 2322 WP_004178051.1 klebicin B-related nuclease bacteriocin -
NB668_RS28625 (NB668_28620) 101979..102524 + 546 WP_004152300.1 hypothetical protein -
NB668_RS28630 (NB668_28625) 102739..103086 - 348 WP_004152301.1 DUF6404 family protein -
NB668_RS28635 (NB668_28630) 103106..103702 - 597 WP_004178053.1 fertility inhibition protein FinO -
NB668_RS28640 (NB668_28635) 103860..104585 - 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -
NB668_RS28645 (NB668_28640) 104665..109926 - 5262 WP_250825005.1 Multifunctional conjugation protein TraI Relaxase
NB668_RS28650 (NB668_28645) 109926..112235 - 2310 WP_004152630.1 type IV conjugative transfer system coupling protein TraD -
NB668_RS28655 (NB668_28650) 112595..113326 - 732 WP_004152629.1 conjugal transfer complement resistance protein TraT -
NB668_RS28660 (NB668_28655) 113516..114043 - 528 WP_004153030.1 hypothetical protein -
NB668_RS28665 (NB668_28660) 114049..116898 - 2850 WP_250825006.1 conjugal transfer mating-pair stabilization protein TraG -
NB668_RS28670 (NB668_28665) 116898..118268 - 1371 WP_004178055.1 conjugal transfer pilus assembly protein TraH -
NB668_RS28675 (NB668_28670) 118255..118683 - 429 WP_004152689.1 hypothetical protein -
NB668_RS28680 (NB668_28675) 118676..119248 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
NB668_RS28685 (NB668_28680) 119220..119459 - 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
NB668_RS28690 (NB668_28685) 119470..120222 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
NB668_RS28695 (NB668_28690) 120243..120569 - 327 WP_004152685.1 hypothetical protein -
NB668_RS28700 (NB668_28695) 120797..121033 - 237 WP_004152683.1 conjugal transfer protein TrbE -
NB668_RS28705 (NB668_28700) 121065..123020 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
NB668_RS28710 (NB668_28705) 123068..123706 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
NB668_RS28715 (NB668_28710) 123719..124678 - 960 WP_015065634.1 conjugal transfer pilus assembly protein TraU -
NB668_RS28720 (NB668_28715) 124722..125348 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
NB668_RS28725 (NB668_28720) 125348..125737 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
NB668_RS28730 (NB668_28725) 125737..128376 - 2640 WP_004152592.1 type IV secretion system protein TraC -
NB668_RS28735 (NB668_28730) 128448..128846 - 399 WP_004153071.1 hypothetical protein -
NB668_RS28740 (NB668_28735) 129142..129546 - 405 WP_004152594.1 hypothetical protein -
NB668_RS28745 (NB668_28740) 129613..129930 - 318 WP_004152595.1 hypothetical protein -
NB668_RS28750 (NB668_28745) 129931..130149 - 219 WP_004171484.1 hypothetical protein -
NB668_RS28755 (NB668_28750) 130173..130463 - 291 WP_004152596.1 hypothetical protein -
NB668_RS28760 (NB668_28755) 130468..130878 - 411 WP_004152597.1 lipase chaperone -
NB668_RS28765 (NB668_28760) 131010..131579 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
NB668_RS28770 (NB668_28765) 131602..132198 - 597 WP_004152599.1 conjugal transfer pilus-stabilizing protein TraP -
NB668_RS28775 (NB668_28770) 132191..133615 - 1425 WP_250825007.1 F-type conjugal transfer pilus assembly protein TraB -
NB668_RS28780 (NB668_28775) 133615..134355 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
NB668_RS28785 (NB668_28780) 134342..134908 - 567 WP_004144423.1 type IV conjugative transfer system protein TraE -
NB668_RS28790 (NB668_28785) 134928..135233 - 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
NB668_RS28795 (NB668_28790) 135247..135615 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
NB668_RS28800 (NB668_28795) 135669..136040 - 372 WP_004208838.1 TraY domain-containing protein -
NB668_RS28805 (NB668_28800) 136124..136819 - 696 WP_004178061.1 transcriptional regulator TraJ family protein -
NB668_RS28810 (NB668_28805) 137033..137425 - 393 WP_004178062.1 conjugal transfer relaxosome DNA-binding protein TraM -
NB668_RS28815 (NB668_28810) 137859..138344 + 486 WP_004178063.1 hypothetical protein VF
NB668_RS28820 (NB668_28815) 138377..138706 - 330 WP_047066474.1 DUF5983 family protein -
NB668_RS28825 (NB668_28820) 138739..139560 - 822 WP_004178064.1 DUF932 domain-containing protein -
NB668_RS28830 (NB668_28825) 140394..140807 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
NB668_RS28835 (NB668_28830) 140808..141086 - 279 WP_004152721.1 helix-turn-helix transcriptional regulator -
NB668_RS28840 (NB668_28835) 141076..141396 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
NB668_RS28845 (NB668_28840) 141477..141701 - 225 WP_004152719.1 hypothetical protein -
NB668_RS28850 (NB668_28845) 141712..141924 - 213 WP_004152718.1 hypothetical protein -
NB668_RS28855 (NB668_28850) 141985..142341 - 357 WP_004152717.1 hypothetical protein -
NB668_RS28860 (NB668_28855) 142977..143327 - 351 WP_004152758.1 hypothetical protein -
NB668_RS28865 (NB668_28860) 143324..143596 - 273 WP_004152759.1 hypothetical protein -
NB668_RS28870 (NB668_28865) 144296..144457 - 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
NB668_RS28875 (NB668_28870) 144529..145608 + 1080 WP_004220208.1 IS481 family transposase ISKpn28 Transposase
NB668_RS28880 (NB668_28875) 145725..146729 + 1005 WP_023279452.1 IS110 family transposase ISPlu13 Transposase
NB668_RS28885 (NB668_28880) 147127..147501 - 375 WP_004152638.1 hypothetical protein -
NB668_RS28890 (NB668_28885) 147557..147883 - 327 WP_004199358.1 hypothetical protein -
NB668_RS28895 (NB668_28890) 147880..148608 - 729 WP_015065618.1 plasmid SOS inhibition protein A -
NB668_RS28900 (NB668_28895) 148605..149036 - 432 WP_020804497.1 conjugation system SOS inhibitor PsiB -
NB668_RS28905 (NB668_28900) 149081..151138 - 2058 WP_250825008.1 ParB/RepB/Spo0J family partition protein -
NB668_RS28910 (NB668_28905) 151208..151456 - 249 WP_001568055.1 DUF905 domain-containing protein -
NB668_RS28915 (NB668_28910) 151505..152047 - 543 WP_004152644.1 single-stranded DNA-binding protein -
NB668_RS28920 (NB668_28915) 152823..153386 - 564 WP_004152645.1 methyltransferase -
NB668_RS28925 (NB668_28920) 153434..154789 - 1356 WP_250825009.1 DUF3560 domain-containing protein -
NB668_RS28930 (NB668_28925) 154841..155071 - 231 WP_004198570.1 hypothetical protein -
NB668_RS28935 (NB668_28930) 155163..155390 - 228 WP_004178072.1 hypothetical protein -
NB668_RS28940 (NB668_28935) 156172..156489 - 318 WP_004118473.1 hypothetical protein -
NB668_RS28945 (NB668_28940) 156524..156778 - 255 WP_004152754.1 DNA polymerase III subunit theta -
NB668_RS28950 (NB668_28945) 157015..157440 - 426 WP_004118478.1 antirestriction protein -
NB668_RS28955 (NB668_28950) 157961..158191 - 231 WP_004152753.1 hypothetical protein -
NB668_RS28960 (NB668_28955) 158425..159912 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
NB668_RS28965 (NB668_28960) 160315..160740 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NB668_RS28970 (NB668_28965) 160740..162011 + 1272 WP_004152715.1 Y-family DNA polymerase -
NB668_RS28975 (NB668_28970) 162150..162305 + 156 WP_001776126.1 hypothetical protein -
NB668_RS28980 (NB668_28975) 162328..163526 - 1199 Protein_174 IS200-IS605 family transposase IS609 Transposase
NB668_RS28985 (NB668_28980) 164963..165934 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
NB668_RS28990 (NB668_28985) 165934..167100 - 1167 WP_000523813.1 hypothetical protein VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance