MGE detailed information
MGE type: Conjugative plasmid MGE length: 126321 bp
Accession: NZ_CP098345 Location: 1..126321 Organism: Klebsiella pneumoniae strain 53009_G1 Replicon: plasmid p53009-126.3
Accession: NZ_CP098345 Location: 1..126321 Organism: Klebsiella pneumoniae strain 53009_G1 Replicon: plasmid p53009-126.3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB668_RS27355 (NB668_27350) | 1..1014 | + | 1014 | WP_015632528.1 | plasmid replication initiator RepA | - |
| NB668_RS27360 (NB668_27355) | 2002..2328 | - | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
| NB668_RS27365 (NB668_27360) | 2510..2791 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| NB668_RS27370 (NB668_27365) | 2845..3456 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| NB668_RS27375 (NB668_27370) | 3453..3584 | - | 132 | Protein_5 | ISNCY family transposase | - |
| NB668_RS27380 (NB668_27375) | 3927..6914 | - | 2988 | WP_000124025.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| NB668_RS27385 (NB668_27380) | 7082..7717 | + | 636 | WP_000470624.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NB668_RS27390 (NB668_27385) | 7745..8581 | - | 837 | WP_009652884.1 | S-formylglutathione hydrolase | - |
| NB668_RS27395 (NB668_27390) | 8647..9045 | - | 399 | WP_000235177.1 | VOC family protein | - |
| NB668_RS27400 (NB668_27395) | 9087..10196 | - | 1110 | WP_000842086.1 | S-(hydroxymethyl)glutathione dehydrogenase | - |
| NB668_RS27405 (NB668_27400) | 10227..10502 | - | 276 | WP_001141270.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| NB668_RS27410 (NB668_27405) | 10804..11457 | - | 654 | WP_005769007.1 | IS6 family transposase IS15DII | Transposase |
| NB668_RS27415 (NB668_27410) | 11523..11738 | - | 216 | Protein_13 | IS6 family transposase IS15 | Transposase |
| NB668_RS27420 (NB668_27415) | 11808..12362 | - | 555 | WP_063840280.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| NB668_RS27425 (NB668_27420) | 12596..13153 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NB668_RS27430 (NB668_27425) | 13315..16320 | + | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NB668_RS27435 (NB668_27430) | 16380..16565 | + | 186 | WP_006705118.1 | IS256 family transposase | - |
| NB668_RS27440 (NB668_27435) | 16812..17144 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| NB668_RS27445 (NB668_27440) | 17267..18105 | - | 839 | Protein_19 | Streptomycin 3''-adenylyltransferase | ARG |
| NB668_RS27450 (NB668_27445) | 18198..19457 | - | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | ARG |
| NB668_RS27455 (NB668_27450) | 19672..20510 | - | 839 | Protein_21 | Streptomycin 3''-adenylyltransferase | ARG |
| NB668_RS27460 (NB668_27455) | 20568..21176 | - | 609 | WP_000050382.1 | HAD family hydrolase | - |
| NB668_RS27465 (NB668_27460) | 21272..22114 | - | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| NB668_RS27470 (NB668_27465) | 22281..23294 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NB668_RS27475 (NB668_27470) | 23497..23847 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| NB668_RS27480 (NB668_27475) | 24023..24583 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NB668_RS27485 (NB668_27480) | 24587..27553 | + | 2967 | WP_250824231.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NB668_RS27490 (NB668_27485) | 27586..27819 | - | 234 | Protein_28 | IS5 family transposase ISPan1 | Transposase |
| NB668_RS27495 (NB668_27490) | 28401..28787 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| NB668_RS27500 (NB668_27495) | 28927..29895 | - | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| NB668_RS27505 (NB668_27500) | 31076..31384 | - | 309 | Protein_31 | replication initiation protein | - |
| NB668_RS27515 (NB668_27510) | 32243..33730 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| NB668_RS27520 (NB668_27515) | 34136..34567 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NB668_RS27525 (NB668_27520) | 34567..35838 | + | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| NB668_RS27530 (NB668_27525) | 35920..36894 | - | 975 | WP_000064119.1 | ParB family protein | - |
| NB668_RS27535 (NB668_27530) | 36894..38099 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| NB668_RS27540 (NB668_27535) | 38514..38783 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| NB668_RS27545 (NB668_27540) | 38960..39826 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| NB668_RS27550 (NB668_27545) | 40356..40460 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| NB668_RS27555 (NB668_27550) | 40589..40687 | + | 99 | Protein_41 | hypothetical protein | - |
| NB668_RS27560 (NB668_27555) | 40818..40988 | - | 171 | Protein_42 | serine hydrolase | - |
| NB668_RS27565 (NB668_27560) | 41043..41747 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NB668_RS27570 (NB668_27565) | 41812..42030 | - | 219 | Protein_44 | AAA family ATPase | - |
| NB668_RS27575 (NB668_27570) | 42104..42520 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NB668_RS27580 (NB668_27575) | 42517..42747 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NB668_RS27585 (NB668_27580) | 42704..43164 | + | 461 | Protein_47 | hypothetical protein | - |
| NB668_RS27590 (NB668_27585) | 43292..43612 | + | 321 | WP_004197770.1 | hypothetical protein | - |
| NB668_RS27595 (NB668_27590) | 43842..43976 | + | 135 | Protein_49 | hypothetical protein | - |
| NB668_RS27600 (NB668_27595) | 44004..44333 | + | 330 | WP_004197773.1 | hypothetical protein | - |
| NB668_RS27605 (NB668_27600) | 44382..45200 | + | 819 | WP_004197776.1 | hypothetical protein | - |
| NB668_RS27610 (NB668_27605) | 45200..45982 | + | 783 | WP_004197768.1 | IS91 family transposase ISSod25 | Transposase |
| NB668_RS27615 (NB668_27610) | 46149..47111 | + | 963 | WP_004197772.1 | Abi family protein | - |
| NB668_RS27620 (NB668_27615) | 47268..47897 | - | 630 | WP_004197775.1 | YkgJ family cysteine cluster protein | - |
| NB668_RS27625 (NB668_27620) | 47947..48120 | - | 174 | WP_004197778.1 | hypothetical protein | - |
| NB668_RS27630 (NB668_27625) | 48122..48367 | - | 246 | WP_226618082.1 | hypothetical protein | - |
| NB668_RS27635 (NB668_27630) | 48409..49377 | + | 969 | WP_072269220.1 | IS5 family transposase IS903B | Transposase |
| NB668_RS27640 (NB668_27635) | 49896..50870 | - | 975 | WP_004197750.1 | ParB family protein | - |
| NB668_RS27645 (NB668_27640) | 50867..52072 | - | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| NB668_RS27650 (NB668_27645) | 52394..53290 | - | 897 | WP_004197749.1 | RepB family plasmid replication initiator protein | - |
| NB668_RS27655 (NB668_27650) | 53691..54962 | - | 1272 | WP_004197744.1 | Y-family DNA polymerase | - |
| NB668_RS27660 (NB668_27655) | 54962..55393 | - | 432 | WP_004197746.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NB668_RS27665 (NB668_27660) | 55799..57286 | + | 1488 | WP_023332914.1 | hypothetical protein | VF |
| NB668_RS27670 (NB668_27665) | 57535..58506 | + | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| NB668_RS27675 (NB668_27670) | 58509..59180 | + | 672 | WP_032431399.1 | plasmid partitioning/stability family protein | - |
| NB668_RS27680 (NB668_27675) | 59244..59474 | + | 231 | WP_009309993.1 | hypothetical protein | - |
| NB668_RS27685 (NB668_27680) | 59637..59839 | + | 203 | Protein_67 | hypothetical protein | - |
| NB668_RS27690 (NB668_27685) | 60088..60315 | + | 228 | Protein_68 | hypothetical protein | - |
| NB668_RS27695 (NB668_27690) | 60312..60647 | + | 336 | WP_004194745.1 | hypothetical protein | - |
| NB668_RS27700 (NB668_27695) | 60792..60961 | + | 170 | Protein_70 | hypothetical protein | - |
| NB668_RS27705 (NB668_27700) | 61033..61734 | + | 702 | WP_001568041.1 | DNA methylase | - |
| NB668_RS27710 (NB668_27705) | 61734..61955 | + | 222 | WP_032411297.1 | hypothetical protein | - |
| NB668_RS27715 (NB668_27710) | 61965..62384 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NB668_RS27720 (NB668_27715) | 62438..63205 | + | 768 | WP_086075678.1 | hypothetical protein | - |
| NB668_RS27725 (NB668_27720) | 63886..64314 | + | 429 | WP_004152356.1 | antirestriction protein | - |
| NB668_RS27730 (NB668_27725) | 64357..64863 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| NB668_RS27735 (NB668_27730) | 64906..65097 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| NB668_RS27740 (NB668_27735) | 65285..65539 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| NB668_RS27745 (NB668_27740) | 65574..65894 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| NB668_RS27750 (NB668_27745) | 66574..66801 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| NB668_RS27755 (NB668_27750) | 66893..67123 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| NB668_RS27760 (NB668_27755) | 67175..68530 | + | 1356 | WP_023329035.1 | DUF3560 domain-containing protein | - |
| NB668_RS27765 (NB668_27760) | 68578..69141 | + | 564 | WP_004152756.1 | methyltransferase | - |
| NB668_RS27770 (NB668_27765) | 69971..70513 | + | 543 | WP_032736793.1 | single-stranded DNA-binding protein | - |
| NB668_RS27775 (NB668_27770) | 70562..70810 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| NB668_RS27780 (NB668_27775) | 70880..72937 | + | 2058 | WP_032736790.1 | ParB/RepB/Spo0J family partition protein | - |
| NB668_RS27785 (NB668_27780) | 72982..73413 | + | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
| NB668_RS27790 (NB668_27785) | 73410..74138 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| NB668_RS27795 (NB668_27790) | 74135..74461 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| NB668_RS27800 (NB668_27795) | 74517..74891 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| NB668_RS27805 (NB668_27800) | 75289..76293 | - | 1005 | WP_023279452.1 | IS110 family transposase ISPlu13 | Transposase |
| NB668_RS27810 (NB668_27805) | 76436..76980 | + | 545 | Protein_92 | IS3 family transposase ISKpn8 | Transposase |
| NB668_RS27815 (NB668_27810) | 76972..78018 | - | 1047 | WP_032736789.1 | IS481 family transposase ISKpn28 | Transposase |
| NB668_RS27820 (NB668_27815) | 78129..78248 | + | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| NB668_RS27825 (NB668_27820) | 78327..79439 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| NB668_RS27830 (NB668_27825) | 80290..80562 | + | 273 | WP_014343506.1 | hypothetical protein | - |
| NB668_RS27835 (NB668_27830) | 80559..80909 | + | 351 | WP_013023809.1 | hypothetical protein | - |
| NB668_RS27840 (NB668_27835) | 80924..81241 | + | 318 | WP_013023810.1 | hypothetical protein | - |
| NB668_RS27845 (NB668_27840) | 82082..82438 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| NB668_RS27850 (NB668_27845) | 82499..82711 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| NB668_RS27855 (NB668_27850) | 82722..82946 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| NB668_RS27860 (NB668_27855) | 83027..83347 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NB668_RS27865 (NB668_27860) | 83337..83615 | + | 279 | WP_020801586.1 | helix-turn-helix transcriptional regulator | - |
| NB668_RS27870 (NB668_27865) | 83616..84017 | + | 402 | WP_015065522.1 | helix-turn-helix domain-containing protein | - |
| NB668_RS27875 (NB668_27870) | 84846..85667 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| NB668_RS27880 (NB668_27875) | 85700..86029 | + | 330 | WP_047066474.1 | DUF5983 family protein | - |
| NB668_RS27885 (NB668_27880) | 86062..86547 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| NB668_RS27890 (NB668_27885) | 86938..87354 | + | 417 | WP_072145360.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NB668_RS27895 (NB668_27890) | 87554..88273 | + | 720 | WP_015065526.1 | hypothetical protein | - |
| NB668_RS27900 (NB668_27895) | 88406..88609 | + | 204 | WP_171486139.1 | TraY domain-containing protein | - |
| NB668_RS27905 (NB668_27900) | 88674..89042 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| NB668_RS27910 (NB668_27905) | 89056..89361 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| NB668_RS27915 (NB668_27910) | 89381..89947 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| NB668_RS27920 (NB668_27915) | 89934..90674 | + | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| NB668_RS27925 (NB668_27920) | 90674..92098 | + | 1425 | WP_015065626.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NB668_RS27930 (NB668_27925) | 92172..92756 | + | 585 | WP_020277945.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NB668_RS27935 (NB668_27930) | 92911..93309 | + | 399 | WP_228288667.1 | hypothetical protein | - |
| NB668_RS27940 (NB668_27935) | 93380..93628 | + | 249 | WP_223175793.1 | hypothetical protein | - |
| NB668_RS27945 (NB668_27940) | 93652..93870 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| NB668_RS27950 (NB668_27945) | 93871..94182 | + | 312 | WP_047066479.1 | hypothetical protein | - |
| NB668_RS27955 (NB668_27950) | 94249..94653 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| NB668_RS27960 (NB668_27955) | 95029..95427 | + | 399 | WP_023179972.1 | hypothetical protein | - |
| NB668_RS27965 (NB668_27960) | 95499..98138 | + | 2640 | WP_032431388.1 | type IV secretion system protein TraC | - |
| NB668_RS27970 (NB668_27965) | 98138..98527 | + | 390 | WP_032736784.1 | type-F conjugative transfer system protein TrbI | - |
| NB668_RS27975 (NB668_27970) | 98527..99153 | + | 627 | WP_020277949.1 | type-F conjugative transfer system protein TraW | - |
| NB668_RS27980 (NB668_27975) | 99195..99584 | + | 390 | WP_020277950.1 | hypothetical protein | - |
| NB668_RS27985 (NB668_27980) | 99581..100570 | + | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| NB668_RS27990 (NB668_27985) | 100583..101221 | + | 639 | WP_015065635.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NB668_RS27995 (NB668_27990) | 101280..103235 | + | 1956 | WP_020277951.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NB668_RS28000 (NB668_27995) | 103267..103521 | + | 255 | WP_049194392.1 | conjugal transfer protein TrbE | - |
| NB668_RS28005 (NB668_28000) | 103499..103747 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| NB668_RS28010 (NB668_28005) | 103760..104086 | + | 327 | WP_004144402.1 | hypothetical protein | - |
| NB668_RS28015 (NB668_28010) | 104107..104859 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NB668_RS28020 (NB668_28015) | 104870..105109 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NB668_RS28025 (NB668_28020) | 105081..105638 | + | 558 | WP_032736782.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NB668_RS28030 (NB668_28025) | 105684..106127 | + | 444 | WP_020277953.1 | F-type conjugal transfer protein TrbF | - |
| NB668_RS28035 (NB668_28030) | 106105..107484 | + | 1380 | WP_014343487.1 | conjugal transfer pilus assembly protein TraH | - |
| NB668_RS28040 (NB668_28035) | 107484..110333 | + | 2850 | WP_193108886.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NB668_RS28045 (NB668_28040) | 110336..110869 | + | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| NB668_RS28050 (NB668_28045) | 111055..111786 | + | 732 | WP_004152629.1 | conjugal transfer complement resistance protein TraT | - |
| NB668_RS28055 (NB668_28050) | 111979..112668 | + | 690 | WP_014343485.1 | hypothetical protein | - |
| NB668_RS28060 (NB668_28055) | 112795..115107 | + | 2313 | WP_228288668.1 | type IV conjugative transfer system coupling protein TraD | - |
| NB668_RS28065 (NB668_28060) | 115107..120365 | + | 5259 | WP_196531821.1 | Multifunctional conjugation protein TraI | Relaxase |
| NB668_RS28070 (NB668_28065) | 120445..121170 | + | 726 | WP_169329119.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NB668_RS28075 (NB668_28070) | 121326..121922 | + | 597 | WP_023340923.1 | fertility inhibition protein FinO | - |
| NB668_RS28080 (NB668_28075) | 121942..122289 | + | 348 | WP_032436733.1 | DUF6404 family protein | - |
| NB668_RS28085 (NB668_28080) | 122760..123404 | + | 645 | WP_032436732.1 | hypothetical protein | - |
| NB668_RS28090 (NB668_28085) | 123460..124110 | + | 651 | WP_032436731.1 | DUF2726 domain-containing protein | - |
| NB668_RS28095 (NB668_28090) | 124107..124418 | + | 312 | WP_023340920.1 | hypothetical protein | - |
| NB668_RS28100 (NB668_28095) | 124524..125072 | + | 549 | WP_032433957.1 | Cardiolipin synthase B | VF |
| NB668_RS28105 (NB668_28100) | 125222..125482 | + | 261 | WP_016529614.1 | replication regulatory protein RepA | - |
| NB668_RS29025 | 125714..125785 | + | 72 | WP_071786674.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|