MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57636 bp
Accession: NZ_CP098332 Location: 1..57636 Organism: Citrobacter freundii strain 59174 Replicon: plasmid p59174-57.6
Accession: NZ_CP098332 Location: 1..57636 Organism: Citrobacter freundii strain 59174 Replicon: plasmid p59174-57.6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB664_RS25725 (NB664_25725) | 1..804 | + | 804 | WP_010454871.1 | IS21 family transposase ISPst3 | Transposase |
| NB664_RS25730 (NB664_25730) | 1159..2280 | + | 1122 | WP_010455375.1 | ISAs1 family transposase ISPa60 | Transposase |
| NB664_RS25735 (NB664_25735) | 2563..3006 | + | 444 | WP_003464965.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| NB664_RS25740 (NB664_25740) | 3008..3547 | + | 540 | WP_003464967.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| NB664_RS25745 (NB664_25745) | 3688..4392 | + | 705 | WP_003464969.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| NB664_RS25750 (NB664_25750) | 4389..5357 | + | 969 | WP_023294901.1 | magnesium and cobalt transport protein CorA | - |
| NB664_RS25755 (NB664_25755) | 5805..6818 | + | 1014 | WP_002118279.1 | Zinc-type alcohol dehydrogenase-like protein | VF |
| NB664_RS25760 (NB664_25760) | 6891..7322 | + | 432 | WP_005006001.1 | heme-binding protein | - |
| NB664_RS25765 (NB664_25765) | 7381..7674 | + | 294 | WP_010591688.1 | DUF1330 domain-containing protein | - |
| NB664_RS25770 (NB664_25770) | 8000..8470 | - | 471 | WP_003464979.1 | hypothetical protein | - |
| NB664_RS25775 (NB664_25775) | 8938..9540 | + | 603 | WP_003464980.1 | sulfite oxidase-like oxidoreductase | - |
| NB664_RS25780 (NB664_25780) | 9533..10279 | + | 747 | WP_002118292.1 | ferredoxin reductase | - |
| NB664_RS25785 (NB664_25785) | 10733..11005 | + | 273 | WP_005005995.1 | glutaredoxin 3 | - |
| NB664_RS25790 (NB664_25790) | 11073..11354 | + | 282 | WP_003464986.1 | DUF427 domain-containing protein | - |
| NB664_RS25795 (NB664_25795) | 11524..11790 | + | 267 | WP_003464988.1 | hypothetical protein | - |
| NB664_RS25800 (NB664_25800) | 12651..13025 | - | 375 | WP_005005993.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| NB664_RS25805 (NB664_25805) | 13756..14274 | + | 519 | WP_003464991.1 | DUF417 family protein | - |
| NB664_RS25810 (NB664_25810) | 14304..14444 | - | 141 | Protein_18 | helix-turn-helix domain-containing protein | - |
| NB664_RS25815 (NB664_25815) | 14508..15212 | + | 705 | WP_047389788.1 | IS6 family transposase IS26 | Transposase |
| NB664_RS25820 (NB664_25820) | 15355..16002 | - | 648 | WP_024262784.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NB664_RS25825 (NB664_25825) | 16339..17001 | + | 663 | WP_044715119.1 | ArsA-related P-loop ATPase | - |
| NB664_RS25830 (NB664_25830) | 17098..17379 | + | 282 | WP_015256852.1 | hypothetical protein | - |
| NB664_RS25835 (NB664_25835) | 17404..18381 | + | 978 | WP_047741502.1 | hypothetical protein | - |
| NB664_RS25840 (NB664_25840) | 18378..18734 | - | 357 | WP_044715127.1 | DNA distortion polypeptide 3 | - |
| NB664_RS25845 (NB664_25845) | 18908..19351 | - | 444 | WP_045282357.1 | hypothetical protein | - |
| NB664_RS25850 (NB664_25850) | 19360..20247 | - | 888 | WP_226852979.1 | replication initiation protein | - |
| NB664_RS25855 (NB664_25855) | 20991..21971 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| NB664_RS25860 (NB664_25860) | 22586..22804 | - | 219 | WP_044715134.1 | hypothetical protein | - |
| NB664_RS25865 (NB664_25865) | 22996..23511 | + | 516 | WP_044715137.1 | DnaJ domain-containing protein | - |
| NB664_RS25870 (NB664_25870) | 23555..24097 | + | 543 | WP_047389752.1 | hypothetical protein | - |
| NB664_RS25875 (NB664_25875) | 24109..24375 | + | 267 | WP_044715141.1 | hypothetical protein | - |
| NB664_RS25880 (NB664_25880) | 24368..24607 | + | 240 | WP_044715143.1 | hypothetical protein | - |
| NB664_RS25885 (NB664_25885) | 24704..25045 | + | 342 | WP_059347451.1 | hypothetical protein | - |
| NB664_RS25890 (NB664_25890) | 25123..25272 | + | 150 | WP_162852120.1 | hypothetical protein | - |
| NB664_RS25895 (NB664_25895) | 25288..25545 | + | 258 | WP_044715147.1 | hypothetical protein | - |
| NB664_RS25900 (NB664_25900) | 25873..26421 | + | 549 | WP_045282359.1 | DNA distortion polypeptide 1 | - |
| NB664_RS25905 (NB664_25905) | 26424..27584 | + | 1161 | WP_044864205.1 | hypothetical protein | Relaxase |
| NB664_RS25910 (NB664_25910) | 27940..28431 | + | 492 | WP_044715152.1 | transcription termination/antitermination NusG family protein | - |
| NB664_RS25915 (NB664_25915) | 28655..29299 | + | 645 | WP_047389758.1 | hypothetical protein | VF |
| NB664_RS25920 (NB664_25920) | 29283..29573 | + | 291 | WP_044715156.1 | TrbC/VirB2 family protein | - |
| NB664_RS25925 (NB664_25925) | 29595..32354 | + | 2760 | WP_044715159.1 | Type IV secretion system protein virB4 | VF |
| NB664_RS25930 (NB664_25930) | 32365..33096 | + | 732 | WP_047389761.1 | type IV secretion system protein | - |
| NB664_RS25935 (NB664_25935) | 33105..33359 | + | 255 | WP_045282363.1 | EexN family lipoprotein | - |
| NB664_RS25940 (NB664_25940) | 33371..34426 | + | 1056 | WP_045282364.1 | hypothetical protein | VF |
| NB664_RS25945 (NB664_25945) | 34549..34677 | + | 129 | WP_015256864.1 | hypothetical protein | - |
| NB664_RS25950 (NB664_25950) | 34667..35395 | + | 729 | WP_047389762.1 | Type IV secretion system protein virB8 | VF |
| NB664_RS25955 (NB664_25955) | 35400..36329 | + | 930 | WP_044715170.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| NB664_RS25960 (NB664_25960) | 36326..37537 | + | 1212 | WP_044715172.1 | hypothetical protein | VF |
| NB664_RS25965 (NB664_25965) | 37561..38592 | + | 1032 | WP_044715211.1 | Type IV secretion system protein PtlH | VF |
| NB664_RS25970 (NB664_25970) | 38595..40430 | + | 1836 | WP_044715174.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NB664_RS25975 (NB664_25975) | 40427..40822 | + | 396 | WP_047389764.1 | cag pathogenicity island Cag12 family protein | - |
| NB664_RS25980 (NB664_25980) | 40827..41165 | + | 339 | WP_225622178.1 | hypothetical protein | - |
| NB664_RS25985 (NB664_25985) | 41234..41437 | + | 204 | WP_044715181.1 | hypothetical protein | - |
| NB664_RS25990 (NB664_25990) | 41443..41778 | + | 336 | WP_052132601.1 | hypothetical protein | - |
| NB664_RS25995 (NB664_25995) | 41775..42245 | + | 471 | WP_044715183.1 | thermonuclease family protein | - |
| NB664_RS26000 (NB664_26000) | 42260..43033 | + | 774 | WP_044715185.1 | hypothetical protein | - |
| NB664_RS26005 (NB664_26005) | 43045..43701 | + | 657 | WP_044715189.1 | hypothetical protein | - |
| NB664_RS26010 (NB664_26010) | 43704..44360 | + | 657 | WP_052132602.1 | hypothetical protein | - |
| NB664_RS26015 (NB664_26015) | 44362..46683 | + | 2322 | WP_047741497.1 | type IA DNA topoisomerase | - |
| NB664_RS26020 (NB664_26020) | 46683..46892 | + | 210 | WP_044715194.1 | hemolysin expression modulator Hha | - |
| NB664_RS26025 (NB664_26025) | 46911..47366 | + | 456 | WP_044715196.1 | H-NS family nucleoid-associated regulatory protein | - |
| NB664_RS26030 (NB664_26030) | 47415..47684 | + | 270 | WP_044715198.1 | hypothetical protein | - |
| NB664_RS26035 (NB664_26035) | 47895..48128 | + | 234 | WP_047389767.1 | antirestriction protein ArdR | - |
| NB664_RS26040 (NB664_26040) | 48131..48949 | + | 819 | WP_040080118.1 | SprT-like domain-containing protein | - |
| NB664_RS26045 (NB664_26045) | 49060..49320 | + | 261 | WP_047389771.1 | hypothetical protein | - |
| NB664_RS27550 | 49856..49951 | + | 96 | WP_000609145.1 | DinQ-like type I toxin DqlB | - |
| NB664_RS26050 (NB664_26050) | 50137..50379 | - | 243 | WP_052132603.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NB664_RS26055 (NB664_26055) | 50778..51800 | - | 1023 | WP_001567660.1 | IS110 family transposase ISSm1 | Transposase |
| NB664_RS26060 (NB664_26060) | 52159..53181 | + | 1023 | WP_001567660.1 | IS110 family transposase ISSm1 | Transposase |
| NB664_RS26065 (NB664_26065) | 54180..54422 | + | 243 | WP_047389775.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| NB664_RS26070 (NB664_26070) | 54415..54699 | + | 285 | WP_047389778.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NB664_RS26075 (NB664_26075) | 54831..55058 | - | 228 | WP_047389780.1 | plasmid partition protein ParG | - |
| NB664_RS26080 (NB664_26080) | 55097..55717 | - | 621 | WP_047389782.1 | ParA family partition ATPase | - |
| NB664_RS26085 (NB664_26085) | 55868..56170 | - | 303 | WP_052132604.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NB664_RS26090 (NB664_26090) | 56481..57176 | + | 696 | WP_047389784.1 | IS6 family transposase ISEas1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|