MGE detailed information
MGE type: Prophage MGE length: 80313 bp
Accession: NZ_CP098330 Location: 2069652..2149964 Organism: Citrobacter freundii strain 59174 Replicon: chromosome
Accession: NZ_CP098330 Location: 2069652..2149964 Organism: Citrobacter freundii strain 59174 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB664_RS09900 () | 2065144..2065710 | + | 567 | WP_003034677.1 | VOC family protein | - |
| NB664_RS09905 () | 2065713..2066459 | + | 747 | WP_044701481.1 | copper homeostasis protein CutC | - |
| NB664_RS09910 () | 2066703..2067671 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| NB664_RS09915 () | 2067668..2068411 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| NB664_RS09920 () | 2068452..2068847 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| NB664_RS09925 () | 2068900..2069673 | - | 774 | WP_044701478.1 | DUF72 domain-containing protein | - |
| NB664_RS09930 () | 2069652..2070965 | - | 1314 | WP_044701477.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NB664_RS09935 () | 2071024..2071260 | - | 237 | WP_003034696.1 | excisionase family protein | - |
| NB664_RS09940 () | 2071325..2071702 | - | 378 | WP_127702269.1 | hypothetical protein | - |
| NB664_RS09945 () | 2071797..2072243 | - | 447 | Protein_1948 | DUF550 domain-containing protein | - |
| NB664_RS09950 () | 2072240..2072533 | - | 294 | WP_044701466.1 | hypothetical protein | - |
| NB664_RS09955 () | 2072537..2072932 | - | 396 | WP_044701465.1 | hypothetical protein | - |
| NB664_RS09960 () | 2072929..2073243 | - | 315 | WP_044701462.1 | hypothetical protein | - |
| NB664_RS09965 () | 2073240..2073803 | - | 564 | WP_046155139.1 | hypothetical protein | - |
| NB664_RS09970 () | 2073787..2074827 | - | 1041 | WP_046155140.1 | chromosome partitioning protein ParB | - |
| NB664_RS09975 () | 2074827..2075186 | - | 360 | WP_176602742.1 | hypothetical protein | - |
| NB664_RS09985 () | 2075785..2076240 | + | 456 | WP_044702982.1 | hypothetical protein | - |
| NB664_RS09990 () | 2076696..2077415 | - | 720 | WP_032140310.1 | XRE family transcriptional regulator | - |
| NB664_RS09995 () | 2077485..2077742 | + | 258 | WP_024195799.1 | YdaS family helix-turn-helix protein | - |
| NB664_RS10000 () | 2077774..2078337 | + | 564 | WP_016240141.1 | YmfL family putative regulatory protein | - |
| NB664_RS10005 () | 2078513..2078692 | + | 180 | Protein_1959 | DUF4222 domain-containing protein | - |
| NB664_RS10010 () | 2078682..2079557 | + | 876 | WP_044702980.1 | conserved phage C-terminal domain-containing protein | - |
| NB664_RS10015 () | 2079560..2080381 | + | 822 | WP_044702979.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| NB664_RS10020 () | 2080378..2080596 | + | 219 | WP_044702978.1 | hypothetical protein | - |
| NB664_RS10025 () | 2080593..2080913 | + | 321 | WP_044702977.1 | LexA family transcriptional regulator | - |
| NB664_RS10030 () | 2080910..2081296 | + | 387 | WP_044702975.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NB664_RS10035 () | 2081309..2082034 | + | 726 | WP_044702973.1 | DNA-binding protein | - |
| NB664_RS10040 () | 2082031..2083020 | + | 990 | WP_046155141.1 | DUF968 domain-containing protein | - |
| NB664_RS10045 () | 2083035..2083613 | + | 579 | WP_044703009.1 | DUF1133 family protein | - |
| NB664_RS10050 () | 2084210..2084788 | + | 579 | WP_044703006.1 | hypothetical protein | - |
| NB664_RS10055 () | 2084888..2085283 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| NB664_RS10060 () | 2085270..2085551 | + | 282 | WP_046155109.1 | phage holin family protein | - |
| NB664_RS10065 () | 2085551..2086168 | + | 618 | WP_044703002.1 | glycoside hydrolase family 19 protein | - |
| NB664_RS10070 () | 2086176..2086445 | + | 270 | WP_047715857.1 | hypothetical protein | - |
| NB664_RS10075 () | 2086402..2086599 | + | 198 | WP_044702998.1 | hypothetical protein | - |
| NB664_RS10080 () | 2086633..2086926 | + | 294 | WP_080941989.1 | hypothetical protein | - |
| NB664_RS10085 () | 2086996..2087232 | + | 237 | WP_044702996.1 | hypothetical protein | - |
| NB664_RS10090 () | 2087424..2087948 | + | 525 | WP_044702995.1 | Rha family transcriptional regulator | - |
| NB664_RS10095 () | 2088027..2088536 | + | 510 | WP_044703079.1 | hypothetical protein | - |
| NB664_RS10100 () | 2089015..2089218 | + | 204 | WP_044703081.1 | hypothetical protein | - |
| NB664_RS10105 () | 2089382..2089759 | + | 378 | WP_042922212.1 | IS66 family transposase ISCfr14 | Transposase |
| NB664_RS10110 () | 2089759..2090106 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| NB664_RS10115 () | 2090156..2091694 | + | 1539 | WP_042922208.1 | IS66 family transposase ISSgsp1 | Transposase |
| NB664_RS10120 () | 2091919..2092407 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| NB664_RS10125 () | 2092407..2094509 | + | 2103 | WP_044700358.1 | phage terminase large subunit family protein | - |
| NB664_RS10130 () | 2094506..2094721 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| NB664_RS10135 () | 2094718..2096226 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| NB664_RS10140 () | 2096240..2098195 | + | 1956 | WP_052739235.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| NB664_RS10145 () | 2098287..2098613 | + | 327 | WP_044700364.1 | DUF2190 family protein | - |
| NB664_RS10150 () | 2098606..2098881 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| NB664_RS10155 () | 2098892..2099470 | + | 579 | WP_044700352.1 | phage tail protein | - |
| NB664_RS10160 () | 2099467..2099868 | + | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| NB664_RS10165 () | 2099878..2100621 | + | 744 | WP_044700348.1 | phage tail protein | - |
| NB664_RS10170 () | 2100632..2101063 | + | 432 | WP_044700346.1 | phage minor tail protein G | - |
| NB664_RS10175 () | 2101114..2101386 | + | 273 | WP_044700345.1 | phage tail assembly protein T | - |
| NB664_RS10180 () | 2101370..2104513 | + | 3144 | WP_044700344.1 | phage tail tape measure protein | - |
| NB664_RS10185 () | 2104517..2104864 | + | 348 | WP_044700341.1 | phage tail protein | - |
| NB664_RS10190 () | 2104861..2105616 | + | 756 | WP_044700338.1 | phage minor tail protein L | - |
| NB664_RS10195 () | 2105618..2106328 | + | 711 | WP_044700337.1 | C40 family peptidase | - |
| NB664_RS10200 () | 2106358..2106693 | + | 336 | WP_052739220.1 | hypothetical protein | - |
| NB664_RS10205 () | 2106750..2107352 | + | 603 | WP_044700334.1 | tail assembly protein | - |
| NB664_RS10210 () | 2107382..2110567 | + | 3186 | WP_044700333.1 | host specificity protein J | - |
| NB664_RS10215 () | 2110567..2110881 | + | 315 | WP_044700331.1 | hypothetical protein | - |
| NB664_RS10220 () | 2110882..2111556 | + | 675 | WP_046155111.1 | hypothetical protein | - |
| NB664_RS10225 () | 2111666..2111905 | + | 240 | WP_071681336.1 | cor protein | - |
| NB664_RS10230 () | 2111964..2113037 | + | 1074 | WP_191029493.1 | tail fiber domain-containing protein | - |
| NB664_RS10235 () | 2113105..2113347 | - | 243 | WP_038642073.1 | DinI family protein | - |
| NB664_RS10240 () | 2113369..2113815 | + | 447 | WP_224769985.1 | S24 family peptidase | - |
| NB664_RS10245 () | 2113816..2114484 | - | 669 | WP_044700303.1 | SOS response-associated peptidase | - |
| NB664_RS10250 () | 2114715..2114810 | - | 96 | Protein_2008 | hypothetical protein | - |
| NB664_RS10255 () | 2114807..2115373 | - | 567 | WP_044700301.1 | hydrolase | - |
| NB664_RS10260 () | 2115662..2117434 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| NB664_RS10265 () | 2117436..2117879 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| NB664_RS10270 () | 2117908..2118651 | + | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| NB664_RS10275 () | 2118686..2119207 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NB664_RS10280 () | 2119288..2119899 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| NB664_RS10285 () | 2119908..2120918 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NB664_RS10290 () | 2120997..2121782 | - | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NB664_RS10295 () | 2121779..2122534 | - | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| NB664_RS10300 () | 2122613..2123557 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NB664_RS10305 () | 2123573..2124892 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| NB664_RS10310 () | 2125012..2125983 | + | 972 | WP_032935377.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NB664_RS10315 () | 2126028..2127470 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| NB664_RS10320 () | 2127589..2128458 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| NB664_RS10325 () | 2128826..2130301 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| NB664_RS10330 () | 2130535..2132346 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| NB664_RS10335 () | 2132381..2133022 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NB664_RS10340 () | 2133090..2134268 | - | 1179 | WP_044700298.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NB664_RS10345 () | 2134400..2134690 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| NB664_RS10350 () | 2134812..2135165 | + | 354 | WP_003034909.1 | protein YebF | - |
| NB664_RS10355 () | 2135260..2135919 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| NB664_RS10360 () | 2136006..2138060 | + | 2055 | WP_170864029.1 | oligopeptidase B | - |
| NB664_RS10365 () | 2138051..2138713 | - | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| NB664_RS10370 () | 2138737..2139393 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| NB664_RS10375 () | 2139500..2139730 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| NB664_RS10380 () | 2139874..2140248 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| NB664_RS10385 () | 2140252..2141124 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| NB664_RS10390 () | 2141145..2141483 | + | 339 | WP_044700293.1 | YebY family protein | - |
| - | 2141604..2141747 | - | 144 | - | - | Antitoxin Detail |
| - | 2141639..2141742 | + | 104 | - | - | Toxin Detail |
| NB664_RS10395 () | 2141896..2142537 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| NB664_RS10400 () | 2142538..2142729 | - | 192 | WP_003034941.1 | YebW family protein | - |
| NB664_RS10405 () | 2142832..2143068 | - | 237 | WP_029139506.1 | YebV family protein | - |
| NB664_RS10410 () | 2143169..2144557 | - | 1389 | WP_044700319.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NB664_RS10415 () | 2144670..2147303 | - | 2634 | WP_003034947.1 | Intermembrane transport protein YebT | VF |
| NB664_RS10420 () | 2147272..2148555 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| NB664_RS10425 () | 2148684..2149181 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| NB664_RS10430 () | 2149278..2149964 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| NB664_RS10435 () | 2149984..2152032 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| NB664_RS10440 () | 2152225..2153106 | + | 882 | WP_003034964.1 | protease HtpX | - |
| NB664_RS10445 () | 2153205..2154242 | - | 1038 | WP_127702267.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|