MGE detailed information
MGE type: Genomic_island MGE length: 34982 bp
Accession: NZ_CP098234 Location: 4537605..4572586 Organism: Escherichia coli strain ZYB39 Replicon: chromosome
Accession: NZ_CP098234 Location: 4537605..4572586 Organism: Escherichia coli strain ZYB39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ69_RS21865 (4532993) | 4532993..4533226 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| KFZ69_RS21870 (4533326) | 4533326..4534144 | + | 819 | WP_137520546.1 | DUF932 domain-containing protein | - |
| KFZ69_RS21875 (4534199) | 4534199..4534684 | + | 486 | WP_000849582.1 | antirestriction protein | - |
| KFZ69_RS21880 (4534700) | 4534700..4535176 | + | 477 | WP_001186726.1 | RadC family protein | - |
| KFZ69_RS21885 (4535239) | 4535239..4535460 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| KFZ69_RS21890 (4535623) | 4535623..4535991 | + | 369 | WP_001278232.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| KFZ69_RS21895 (4536081) | 4536081..4536455 | + | 375 | WP_073487848.1 | TA system toxin CbtA family protein | - |
| KFZ69_RS21900 (4536452) | 4536452..4536940 | + | 489 | WP_000777541.1 | DUF5983 family protein | - |
| KFZ69_RS21905 (4536952) | 4536952..4537149 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| KFZ69_RS21910 (4537246) | 4537246..4537533 | + | 288 | Protein_4289 | DUF4942 domain-containing protein | - |
| KFZ69_RS21915 (4537605) | 4537605..4538609 | + | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| KFZ69_RS21920 (4538891) | 4538891..4539175 | + | 285 | Protein_4291 | DUF4942 domain-containing protein | - |
| KFZ69_RS21925 (4539924) | 4539924..4541462 | + | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KFZ69_RS21930 (4541827) | 4541827..4543161 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KFZ69_RS21935 (4543241) | 4543241..4545388 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KFZ69_RS21940 (4545447) | 4545447..4546904 | + | 1458 | WP_275874760.1 | dipeptide/tripeptide permease DtpC | - |
| KFZ69_RS21945 (4547141) | 4547141..4548658 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| KFZ69_RS21950 (4548777) | 4548777..4548950 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KFZ69_RS21955 (4548978) | 4548978..4549274 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KFZ69_RS21960 (4549501) | 4549501..4549773 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KFZ69_RS21965 (4549986) | 4549986..4553915 | - | 3930 | WP_001542592.1 | Serine protease EspC | VF |
| KFZ69_RS21970 (4555076) | 4555076..4555906 | - | 831 | WP_275874761.1 | AraC family transcriptional regulator | - |
| KFZ69_RS21975 (4556813) | 4556813..4560649 | - | 3837 | WP_032141681.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| KFZ69_RS21980 (4560999) | 4560999..4561520 | + | 522 | WP_032141680.1 | hypothetical protein | VF |
| KFZ69_RS21985 (4561591) | 4561591..4563948 | + | 2358 | WP_032141679.1 | Outer membrane usher protein YraJ | VF |
| KFZ69_RS21990 (4563941) | 4563941..4564642 | + | 702 | WP_032141678.1 | Chaperone protein FaeE | VF |
| KFZ69_RS21995 (4564662) | 4564662..4565657 | + | 996 | WP_032142086.1 | fimbrial protein | - |
| KFZ69_RS22000 (4565671) | 4565671..4566192 | + | 522 | WP_001542589.1 | hypothetical protein | VF |
| KFZ69_RS22005 (4566185) | 4566185..4566703 | + | 519 | WP_003582778.1 | fimbrial family protein | - |
| KFZ69_RS22010 (4566783) | 4566783..4567513 | + | 731 | Protein_4309 | IS3 family transposase ISKpn1 | Transposase |
| KFZ69_RS22015 (4567643) | 4567643..4569706 | - | 2064 | WP_231368599.1 | peptidase domain-containing ABC transporter | - |
| KFZ69_RS22020 (4569798) | 4569798..4571018 | - | 1221 | WP_032141676.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| KFZ69_RS22025 (4571057) | 4571057..4571629 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| KFZ69_RS22030 (4572032) | 4572032..4572783 | + | 752 | Protein_4313 | IS3 family transposase | - |
| KFZ69_RS22035 (4572912) | 4572912..4574543 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| KFZ69_RS22040 (4574540) | 4574540..4575259 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| KFZ69_RS22045 (4575830) | 4575830..4577170 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|