MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP098231 Location: 4164662..4183914 Organism: Escherichia coli strain XJ34 Replicon: chromosome
Accession: NZ_CP098231 Location: 4164662..4183914 Organism: Escherichia coli strain XJ34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ60_RS20055 (4160141) | 4160141..4160644 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| KFZ60_RS20060 (4160657) | 4160657..4161187 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| KFZ60_RS20065 (4161197) | 4161197..4163833 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| KFZ60_RS20070 (4163900) | 4163900..4164625 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| KFZ60_RS20075 (4164662) | 4164662..4165201 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| KFZ60_RS20080 (4165266) | 4165266..4165814 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| KFZ60_RS20085 (4166296) | 4166296..4166892 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| KFZ60_RS20090 (4167370) | 4167370..4167972 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| KFZ60_RS20095 (4169428) | 4169428..4170144 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KFZ60_RS20100 (4170164) | 4170164..4171270 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KFZ60_RS20105 (4171335) | 4171335..4172315 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KFZ60_RS20110 (4172425) | 4172425..4172630 | + | 206 | Protein_3936 | HNH endonuclease | - |
| KFZ60_RS20115 (4172898) | 4172898..4174138 | - | 1241 | Protein_3937 | helicase YjhR | - |
| KFZ60_RS20120 (4174254) | 4174254..4174385 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| KFZ60_RS20125 (4174876) | 4174876..4175133 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KFZ60_RS20130 (4175145) | 4175145..4175690 | + | 546 | WP_088375732.1 | N-acetyltransferase | Antitoxin Detail |
| KFZ60_RS20135 (4175746) | 4175746..4176492 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KFZ60_RS20140 (4176661) | 4176661..4176879 | + | 219 | Protein_3942 | hypothetical protein | - |
| KFZ60_RS20145 (4176917) | 4176917..4177033 | + | 117 | Protein_3943 | VOC family protein | - |
| KFZ60_RS20150 (4177278) | 4177278..4178399 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KFZ60_RS20155 (4178396) | 4178396..4178674 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KFZ60_RS20160 (4178686) | 4178686..4179999 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| KFZ60_RS20165 (4180012) | 4180012..4180818 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| KFZ60_RS20170 (4180949) | 4180949..4181380 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| KFZ60_RS20175 (4181392) | 4181392..4182024 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| KFZ60_RS20180 (4182041) | 4182041..4182823 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KFZ60_RS20185 (4183126) | 4183126..4183914 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| KFZ60_RS20190 (4183919) | 4183919..4184824 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| KFZ60_RS20195 (4184835) | 4184835..4186802 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| KFZ60_RS20200 (4186909) | 4186909..4188258 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|