MGE detailed information
MGE type: Prophage MGE length: 61060 bp
Accession: NZ_CP098229 Location: 2318131..2379190 Organism: Escherichia coli strain XJ55 Replicon: chromosome
Accession: NZ_CP098229 Location: 2318131..2379190 Organism: Escherichia coli strain XJ55 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ57_RS11290 (2314029) | 2314029..2315249 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| KFZ57_RS11295 (2315374) | 2315374..2316069 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| KFZ57_RS11300 (2316022) | 2316022..2317314 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KFZ57_RS11305 (2317474) | 2317474..2318088 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| KFZ57_RS11310 (2318131) | 2318131..2318985 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KFZ57_RS11315 (2318987) | 2318987..2319604 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KFZ57_RS11320 (2319615) | 2319615..2322038 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFZ57_RS11325 (2322099) | 2322099..2324525 | - | 2427 | WP_000041535.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFZ57_RS11330 (2324724) | 2324724..2325029 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KFZ57_RS11335 (2325137) | 2325137..2325847 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KFZ57_RS11340 (2325850) | 2325850..2326410 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KFZ57_RS11345 (2326445) | 2326445..2326786 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KFZ57_RS11350 (2326921) | 2326921..2327247 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KFZ57_RS11355 (2327453) | 2327453..2328667 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KFZ57_RS11360 (2328679) | 2328679..2329698 | + | 1020 | WP_000836064.1 | Zn-dependent oxidoreductase | - |
| KFZ57_RS11365 (2329886) | 2329886..2331166 | - | 1281 | WP_000876985.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KFZ57_RS11370 (2331201) | 2331201..2331452 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KFZ57_RS11375 (2331525) | 2331525..2333996 | - | 2472 | WP_001537739.1 | exonuclease | - |
| KFZ57_RS11380 (2334089) | 2334089..2334280 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KFZ57_RS11385 (2334277) | 2334277..2334465 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KFZ57_RS11390 (2335030) | 2335030..2335248 | - | 219 | WP_001171942.1 | protein YdfC | - |
| KFZ57_RS11395 (2335278) | 2335278..2335406 | - | 129 | WP_000344964.1 | protein YdfB | - |
| KFZ57_RS11400 (2335408) | 2335408..2335563 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KFZ57_RS11405 (2335730) | 2335730..2336137 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| KFZ57_RS11410 (2336221) | 2336221..2336451 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KFZ57_RS11415 (2336435) | 2336435..2336956 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| KFZ57_RS11420 (2336937) | 2336937..2337902 | + | 966 | WP_275801811.1 | hypothetical protein | - |
| KFZ57_RS11425 (2337943) | 2337943..2338365 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KFZ57_RS11430 (2338362) | 2338362..2338851 | + | 490 | Protein_2233 | class I SAM-dependent methyltransferase | - |
| KFZ57_RS11435 (2339329) | 2339329..2339750 | + | 422 | Protein_2234 | hypothetical protein | - |
| KFZ57_RS11440 (2340406) | 2340406..2341428 | + | 1023 | Protein_2235 | ISNCY family transposase ISCARN112 | Transposase |
| KFZ57_RS11445 (2341549) | 2341549..2341698 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KFZ57_RS11450 (2342135) | 2342135..2342467 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KFZ57_RS11455 (2342670) | 2342670..2342975 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KFZ57_RS11460 (2343000) | 2343000..2343239 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFZ57_RS11465 (2343239) | 2343239..2343526 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFZ57_RS11470 (2343598) | 2343598..2343753 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KFZ57_RS11475 (2343970) | 2343970..2344221 | + | 252 | WP_000980994.1 | protein Rem | - |
| KFZ57_RS11480 (2344288) | 2344288..2344566 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KFZ57_RS11485 (2344568) | 2344568..2345617 | + | 1050 | WP_275801813.1 | DUF968 domain-containing protein | - |
| KFZ57_RS11490 (2345631) | 2345631..2346383 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KFZ57_RS11495 (2346661) | 2346661..2346750 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KFZ57_RS11500 (2346805) | 2346805..2347017 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KFZ57_RS11505 (2347318) | 2347318..2347533 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KFZ57_RS11510 (2347897) | 2347897..2348067 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KFZ57_RS11515 (2348287) | 2348287..2348502 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KFZ57_RS11520 (2348507) | 2348507..2348818 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KFZ57_RS11525 (2348815) | 2348815..2349348 | + | 534 | WP_001092971.1 | lysozyme | - |
| KFZ57_RS11530 (2349345) | 2349345..2349842 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KFZ57_RS11535 (2350205) | 2350205..2350417 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KFZ57_RS11540 (2350428) | 2350428..2350616 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KFZ57_RS11545 (2350619) | 2350619..2350684 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KFZ57_RS11550 (2350689) | 2350689..2350919 | + | 231 | WP_000720962.1 | protein YnfN | - |
| KFZ57_RS11555 (2351091) | 2351091..2351264 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KFZ57_RS11560 (2351416) | 2351416..2351826 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KFZ57_RS11565 (2351884) | 2351884..2352117 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KFZ57_RS11570 (2352506) | 2352506..2353051 | + | 546 | WP_275801815.1 | DNA-packaging protein | - |
| KFZ57_RS11575 (2353026) | 2353026..2354951 | + | 1926 | WP_001027298.1 | phage terminase large subunit family protein | - |
| KFZ57_RS11580 (2354948) | 2354948..2355154 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KFZ57_RS11585 (2355151) | 2355151..2356752 | + | 1602 | WP_129965702.1 | phage portal protein | - |
| KFZ57_RS11590 (2356733) | 2356733..2358064 | + | 1332 | WP_147706876.1 | S49 family peptidase | - |
| KFZ57_RS11595 (2358074) | 2358074..2358406 | + | 333 | WP_000201478.1 | head decoration protein | - |
| KFZ57_RS11600 (2358462) | 2358462..2359487 | + | 1026 | WP_000118192.1 | major capsid protein | - |
| KFZ57_RS11605 (2359529) | 2359529..2359924 | + | 396 | WP_001586767.1 | DNA-packaging protein FI | - |
| KFZ57_RS11610 (2359936) | 2359936..2360289 | + | 354 | WP_000752966.1 | head-tail joining protein | - |
| KFZ57_RS11615 (2360301) | 2360301..2360879 | + | 579 | WP_141218991.1 | phage tail protein | - |
| KFZ57_RS11620 (2360876) | 2360876..2361271 | + | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| KFZ57_RS11625 (2361279) | 2361279..2362019 | + | 741 | WP_001518408.1 | phage tail protein | - |
| KFZ57_RS11630 (2362035) | 2362035..2362457 | + | 423 | WP_001518409.1 | phage minor tail protein G | - |
| KFZ57_RS11635 (2362484) | 2362484..2362873 | + | 390 | WP_001347435.1 | phage tail assembly protein T | - |
| KFZ57_RS11640 (2362866) | 2362866..2365445 | + | 2580 | WP_275801827.1 | phage tail tape measure protein | - |
| KFZ57_RS11645 (2365442) | 2365442..2365771 | + | 330 | WP_097093995.1 | phage tail protein | - |
| KFZ57_RS11650 (2365771) | 2365771..2366469 | + | 699 | WP_001152525.1 | phage minor tail protein L | - |
| KFZ57_RS11655 (2366474) | 2366474..2367217 | + | 744 | WP_032156900.1 | C40 family peptidase | - |
| KFZ57_RS11660 (2367214) | 2367214..2367786 | + | 573 | WP_000847683.1 | tail assembly protein | - |
| KFZ57_RS11665 (2367847) | 2367847..2371326 | + | 3480 | WP_275801831.1 | host specificity protein J | - |
| KFZ57_RS11670 (2371394) | 2371394..2371993 | + | 600 | WP_175096856.1 | Outer membrane protein X | VF |
| KFZ57_RS11675 (2372058) | 2372058..2374457 | + | 2400 | WP_113403958.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KFZ57_RS11680 (2374454) | 2374454..2374735 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| KFZ57_RS11685 (2374745) | 2374745..2375449 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| KFZ57_RS11690 (2375460) | 2375460..2375753 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| KFZ57_RS11695 (2375773) | 2375773..2375883 | + | 111 | Protein_2286 | tail fiber assembly protein | - |
| KFZ57_RS11700 (2375981) | 2375981..2376571 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFZ57_RS11705 (2376888) | 2376888..2377121 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KFZ57_RS11710 (2377190) | 2377190..2377303 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KFZ57_RS11715 (2377907) | 2377907..2379190 | + | 1284 | Protein_2290 | MHS family MFS transporter YdfJ | - |
| KFZ57_RS11720 (2379279) | 2379279..2380739 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| KFZ57_RS11725 (2380775) | 2380775..2380978 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KFZ57_RS11730 (2381156) | 2381156..2381842 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KFZ57_RS11735 (2381931) | 2381931..2382677 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|