MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP098227 Location: 4164677..4183929 Organism: Escherichia coli strain XJ6-3 Replicon: chromosome
Accession: NZ_CP098227 Location: 4164677..4183929 Organism: Escherichia coli strain XJ6-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ54_RS20045 (4160156) | 4160156..4160659 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| KFZ54_RS20050 (4160672) | 4160672..4161202 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| KFZ54_RS20055 (4161212) | 4161212..4163848 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| KFZ54_RS20060 (4163915) | 4163915..4164640 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| KFZ54_RS20065 (4164677) | 4164677..4165216 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| KFZ54_RS20070 (4165281) | 4165281..4165829 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| KFZ54_RS20075 (4166311) | 4166311..4166907 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| KFZ54_RS20080 (4167385) | 4167385..4167987 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| KFZ54_RS20085 (4169443) | 4169443..4170159 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KFZ54_RS20090 (4170179) | 4170179..4171285 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KFZ54_RS20095 (4171350) | 4171350..4172330 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KFZ54_RS20100 (4172440) | 4172440..4172645 | + | 206 | Protein_3934 | HNH endonuclease | - |
| KFZ54_RS20105 (4172913) | 4172913..4174153 | - | 1241 | Protein_3935 | helicase YjhR | - |
| KFZ54_RS20110 (4174269) | 4174269..4174400 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| KFZ54_RS20115 (4174891) | 4174891..4175148 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KFZ54_RS20120 (4175160) | 4175160..4175705 | + | 546 | WP_088375732.1 | N-acetyltransferase | Antitoxin Detail |
| KFZ54_RS20125 (4175761) | 4175761..4176507 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KFZ54_RS20130 (4176676) | 4176676..4176894 | + | 219 | Protein_3940 | hypothetical protein | - |
| KFZ54_RS20135 (4176932) | 4176932..4177048 | + | 117 | Protein_3941 | VOC family protein | - |
| KFZ54_RS20140 (4177293) | 4177293..4178414 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KFZ54_RS20145 (4178411) | 4178411..4178689 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KFZ54_RS20150 (4178701) | 4178701..4180014 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| KFZ54_RS20155 (4180027) | 4180027..4180833 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| KFZ54_RS20160 (4180964) | 4180964..4181395 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| KFZ54_RS20165 (4181407) | 4181407..4182039 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| KFZ54_RS20170 (4182056) | 4182056..4182838 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KFZ54_RS20175 (4183141) | 4183141..4183929 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| KFZ54_RS20180 (4183934) | 4183934..4184839 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| KFZ54_RS20185 (4184850) | 4184850..4186817 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| KFZ54_RS20190 (4186924) | 4186924..4188273 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|