MGE detailed information
MGE type: Genomic_island MGE length: 59096 bp
Accession: NZ_CP098227 Location: 3734341..3793436 Organism: Escherichia coli strain XJ6-3 Replicon: chromosome
Accession: NZ_CP098227 Location: 3734341..3793436 Organism: Escherichia coli strain XJ6-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ54_RS17995 (3730058) | 3730058..3730726 | + | 669 | WP_088376540.1 | protein YkgH | - |
| KFZ54_RS18000 (3730969) | 3730969..3731664 | - | 696 | WP_088376539.1 | lactate utilization protein C | - |
| KFZ54_RS18005 (3731657) | 3731657..3733084 | - | 1428 | WP_088376538.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| KFZ54_RS18010 (3733095) | 3733095..3733814 | - | 720 | WP_001102100.1 | (Fe-S)-binding protein | - |
| KFZ54_RS18015 (3734341) | 3734341..3735195 | - | 855 | WP_000339588.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| KFZ54_RS18020 (3735421) | 3735421..3736746 | + | 1326 | WP_021556519.1 | reactive chlorine resistance oxidoreductase RclA | - |
| KFZ54_RS18025 (3736855) | 3736855..3737091 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| KFZ54_RS18030 (3737103) | 3737103..3737696 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| KFZ54_RS18035 (3737856) | 3737856..3738725 | - | 870 | WP_048970461.1 | aldo/keto reductase | - |
| KFZ54_RS18040 (3738973) | 3738973..3739825 | + | 853 | Protein_3533 | helix-turn-helix domain-containing protein | - |
| KFZ54_RS18045 (3739965) | 3739965..3744221 | - | 4257 | WP_097756085.1 | hypothetical protein | VF |
| KFZ54_RS18050 (3744787) | 3744787..3745347 | + | 561 | Protein_3535 | aldo/keto reductase | - |
| KFZ54_RS18055 (3745555) | 3745555..3745911 | + | 357 | WP_001038968.1 | hypothetical protein | - |
| KFZ54_RS18060 (3745960) | 3745960..3746657 | - | 698 | Protein_3537 | IS1 family transposase | - |
| KFZ54_RS18065 (3746976) | 3746976..3747902 | - | 927 | WP_001307603.1 | HTH-type transcriptional regulator PgrR | VF |
| KFZ54_RS18070 (3748059) | 3748059..3748979 | + | 921 | WP_000860023.1 | alpha/beta hydrolase | - |
| KFZ54_RS18075 (3749223) | 3749223..3750365 | + | 1143 | WP_000182344.1 | NADH-dependent flavin oxidoreductase | - |
| KFZ54_RS18080 (3750839) | 3750839..3750940 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| KFZ54_RS18085 (3751304) | 3751304..3751567 | + | 264 | WP_000804001.1 | type B 50S ribosomal protein L31 | - |
| KFZ54_RS18090 (3751567) | 3751567..3751707 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| KFZ54_RS18095 (3751742) | 3751742..3751969 | - | 228 | WP_088376536.1 | protein YkgL | - |
| KFZ54_RS18100 (3752792) | 3752792..3753334 | + | 543 | WP_122988340.1 | HTH-type transcriptional regulator EcpR | VF |
| KFZ54_RS18105 (3753409) | 3753409..3753996 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| KFZ54_RS18110 (3754054) | 3754054..3754722 | + | 669 | WP_088376534.1 | putative fimbrial chaperone EcpB | VF |
| KFZ54_RS18115 (3754748) | 3754748..3757273 | + | 2526 | WP_096253431.1 | putative outer membrane usher protein EcpC | VF |
| KFZ54_RS18120 (3757263) | 3757263..3758906 | + | 1644 | WP_069913655.1 | Fimbria adhesin EcpD | VF |
| KFZ54_RS18125 (3758875) | 3758875..3759585 | + | 711 | WP_033815317.1 | putative fimbrial chaperone EcpE | VF |
| KFZ54_RS18130 (3759898) | 3759898..3760227 | + | 330 | WP_001307600.1 | YkgJ family cysteine cluster protein | - |
| KFZ54_RS18135 (3760474) | 3760474..3761088 | - | 615 | WP_001019920.1 | YagU family protein | - |
| KFZ54_RS18140 (3761135) | 3761135..3761344 | - | 210 | WP_140435262.1 | hypothetical protein | - |
| KFZ54_RS18145 (3761506) | 3761506..3762195 | + | 690 | WP_000070679.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| KFZ54_RS18150 (3762192) | 3762192..3763148 | + | 957 | WP_000643339.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| KFZ54_RS18155 (3763145) | 3763145..3765343 | + | 2199 | WP_115978194.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| KFZ54_RS18160 (3765353) | 3765353..3766309 | + | 957 | WP_089534667.1 | molybdenum cofactor insertion chaperone PaoD | - |
| KFZ54_RS18165 (3766360) | 3766360..3766698 | + | 339 | Protein_3558 | LysR substrate-binding domain-containing protein | - |
| KFZ54_RS18170 (3767175) | 3767175..3768047 | - | 873 | WP_000417871.1 | hypothetical protein | - |
| KFZ54_RS18175 (3768180) | 3768180..3768782 | - | 603 | WP_053903522.1 | IS91 family transposase ISMno24 | Transposase |
| KFZ54_RS18180 (3768989) | 3768989..3769900 | - | 912 | WP_115978196.1 | restriction endonuclease | - |
| KFZ54_RS18185 (3770082) | 3770082..3770159 | - | 78 | Protein_3562 | capsid protein | - |
| KFZ54_RS18190 (3770374) | 3770374..3770685 | + | 312 | Protein_3563 | hypothetical protein | - |
| KFZ54_RS18195 (3770670) | 3770670..3770879 | + | 210 | Protein_3564 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| KFZ54_RS18200 (3770955) | 3770955..3771317 | + | 363 | WP_020839050.1 | arsenic metallochaperone ArsD family protein | - |
| KFZ54_RS18205 (3771338) | 3771338..3773095 | + | 1758 | WP_088376533.1 | Arsenical pump-driving ATPase | VF |
| KFZ54_RS18210 (3773169) | 3773169..3773537 | - | 369 | WP_020839048.1 | winged helix-turn-helix domain-containing protein | - |
| KFZ54_RS18215 (3773601) | 3773601..3774413 | - | 813 | WP_020839047.1 | sulfite exporter TauE/SafE family protein | - |
| KFZ54_RS18220 (3774563) | 3774563..3774994 | - | 432 | WP_020839046.1 | glutaredoxin-dependent arsenate reductase | - |
| KFZ54_RS18225 (3775007) | 3775007..3776296 | - | 1290 | WP_063618737.1 | arsenite efflux transporter membrane subunit ArsB | - |
| KFZ54_RS18230 (3776344) | 3776344..3778095 | - | 1752 | WP_115978198.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| KFZ54_RS18235 (3778113) | 3778113..3778475 | - | 363 | WP_088376531.1 | arsenite efflux transporter metallochaperone ArsD | - |
| KFZ54_RS18240 (3778523) | 3778523..3778873 | - | 351 | WP_047620677.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| KFZ54_RS18245 (3779005) | 3779005..3780768 | - | 1764 | WP_088376530.1 | hypothetical protein | - |
| KFZ54_RS18250 (3780777) | 3780777..3781886 | - | 1110 | WP_088376529.1 | hypothetical protein | - |
| KFZ54_RS18255 (3782111) | 3782111..3783295 | - | 1185 | WP_088376528.1 | Prophage integrase IntS ; Integrase | Integrase |
| KFZ54_RS18265 (3783649) | 3783649..3784902 | - | 1254 | WP_000893266.1 | glutamate-5-semialdehyde dehydrogenase | - |
| KFZ54_RS18270 (3784914) | 3784914..3786017 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| KFZ54_RS18275 (3786304) | 3786304..3787359 | + | 1056 | WP_088376520.1 | phosphoporin PhoE | - |
| KFZ54_RS18280 (3787398) | 3787398..3787799 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3788517) | 3788517..3788597 | - | 81 | NuclAT_12 | - | - |
| - (3788517) | 3788517..3788597 | - | 81 | NuclAT_12 | - | - |
| - (3788517) | 3788517..3788597 | - | 81 | NuclAT_12 | - | - |
| - (3788517) | 3788517..3788597 | - | 81 | NuclAT_12 | - | - |
| KFZ54_RS18285 (3787857) | 3787857..3789101 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| KFZ54_RS18290 (3789193) | 3789193..3789651 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| KFZ54_RS18295 (3789912) | 3789912..3791369 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| KFZ54_RS18300 (3791426) | 3791426..3791734 | - | 309 | Protein_3584 | peptide chain release factor-like protein | - |
| KFZ54_RS18305 (3791754) | 3791754..3791962 | - | 209 | Protein_3585 | RtcB family protein | - |
| KFZ54_RS18310 (3792280) | 3792280..3792732 | - | 453 | WP_088376518.1 | GNAT family N-acetyltransferase | - |
| KFZ54_RS18315 (3792742) | 3792742..3793140 | - | 399 | WP_001263494.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KFZ54_RS18320 (3793143) | 3793143..3793436 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KFZ54_RS18325 (3793488) | 3793488..3794543 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KFZ54_RS18330 (3794614) | 3794614..3795399 | - | 786 | WP_162859066.1 | putative lateral flagellar export/assembly protein LafU | - |
| KFZ54_RS18335 (3795371) | 3795371..3797083 | + | 1713 | Protein_3591 | flagellar biosynthesis protein FlhA | - |
| KFZ54_RS18340 (3797316) | 3797316..3797813 | - | 498 | WP_047625020.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|