MGE detailed information
MGE type: Conjugative plasmid MGE length: 51273 bp
Accession: NZ_CP098221 Location: 1..51273 Organism: Escherichia coli strain Z0117EC0013 Replicon: plasmid pZ0117EC0013-2
Accession: NZ_CP098221 Location: 1..51273 Organism: Escherichia coli strain Z0117EC0013 Replicon: plasmid pZ0117EC0013-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY13_RS24385 (NBY13_24385) | 239..754 | - | 516 | WP_001462163.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NBY13_RS24390 (NBY13_24390) | 751..1002 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| NBY13_RS24395 (NBY13_24395) | 995..1315 | - | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| NBY13_RS24400 (NBY13_24400) | 1312..1884 | - | 573 | WP_023063811.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY13_RS24405 (NBY13_24405) | 1874..3301 | - | 1428 | WP_001462160.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NBY13_RS24410 (NBY13_24410) | 3301..4029 | - | 729 | WP_001230809.1 | type-F conjugative transfer system secretin TraK | - |
| NBY13_RS24415 (NBY13_24415) | 4016..4582 | - | 567 | WP_000399805.1 | type IV conjugative transfer system protein TraE | - |
| NBY13_RS24420 (NBY13_24420) | 4604..4915 | - | 312 | WP_000012097.1 | type IV conjugative transfer system protein TraL | - |
| NBY13_RS24425 (NBY13_24425) | 4930..5295 | - | 366 | WP_001098996.1 | type IV conjugative transfer system pilin TraA | - |
| NBY13_RS24430 (NBY13_24430) | 5328..5555 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| NBY13_RS24435 (NBY13_24435) | 5680..6333 | - | 654 | WP_001342640.1 | conjugal transfer protein TraJ | - |
| NBY13_RS24440 (NBY13_24440) | 6524..6907 | - | 384 | WP_001342639.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY13_RS24445 (NBY13_24445) | 7230..7832 | + | 603 | WP_077694819.1 | hypothetical protein | VF |
| NBY13_RS24450 (NBY13_24450) | 8129..8950 | - | 822 | WP_001234372.1 | DUF932 domain-containing protein | - |
| NBY13_RS24455 (NBY13_24455) | 9061..9210 | - | 150 | WP_233337085.1 | hypothetical protein | - |
| NBY13_RS24460 (NBY13_24460) | 9482..9784 | - | 303 | WP_000379301.1 | hypothetical protein | - |
| NBY13_RS24465 (NBY13_24465) | 9860..10093 | - | 234 | WP_000093745.1 | hypothetical protein | - |
| NBY13_RS24470 (NBY13_24470) | 10521..10808 | - | 288 | WP_000606467.1 | hypothetical protein | - |
| NBY13_RS24475 (NBY13_24475) | 11113..11406 | - | 294 | WP_000673431.1 | hypothetical protein | - |
| NBY13_RS24480 (NBY13_24480) | 11977..12219 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| NBY13_RS24485 (NBY13_24485) | 12216..12470 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| NBY13_RS24490 (NBY13_24490) | 12467..13009 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| NBY13_RS24495 (NBY13_24495) | 13113..13628 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| NBY13_RS24500 (NBY13_24500) | 14463..14813 | - | 351 | WP_000127482.1 | addiction module antitoxin | - |
| NBY13_RS24505 (NBY13_24505) | 14800..15144 | - | 345 | WP_001146936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NBY13_RS24510 (NBY13_24510) | 15498..15821 | - | 324 | WP_000432873.1 | hypothetical protein | - |
| NBY13_RS24515 (NBY13_24515) | 16374..17033 | + | 660 | WP_000516232.1 | division plane positioning ATPase MipZ | - |
| NBY13_RS24520 (NBY13_24520) | 17123..17425 | + | 303 | WP_001096511.1 | hypothetical protein | - |
| NBY13_RS24525 (NBY13_24525) | 17807..17997 | - | 191 | Protein_29 | hypothetical protein | - |
| NBY13_RS24530 (NBY13_24530) | 18700..19557 | - | 858 | WP_001462098.1 | incFII family plasmid replication initiator RepA | - |
| NBY13_RS24535 (NBY13_24535) | 19550..19624 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| NBY13_RS24540 (NBY13_24540) | 19869..20117 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| NBY13_RS24545 (NBY13_24545) | 20357..20947 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| NBY13_RS24550 (NBY13_24550) | 20985..21194 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| NBY13_RS24555 (NBY13_24555) | 21240..21701 | - | 462 | WP_000978819.1 | thermonuclease family protein | - |
| NBY13_RS24560 (NBY13_24560) | 21945..22136 | - | 192 | WP_071528006.1 | hypothetical protein | - |
| NBY13_RS24565 (NBY13_24565) | 22801..23478 | - | 678 | WP_032296380.1 | PIN domain-containing protein | - |
| NBY13_RS24570 (NBY13_24570) | 23765..23977 | - | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| NBY13_RS24575 (NBY13_24575) | 24096..24656 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| NBY13_RS24580 (NBY13_24580) | 24711..25457 | - | 747 | WP_032188604.1 | conjugal transfer pilus acetylase TraX | - |
| NBY13_RS24585 (NBY13_24585) | 25477..30747 | - | 5271 | WP_242817605.1 | Multifunctional conjugation protein TraI | Relaxase |
| NBY13_RS24590 (NBY13_24590) | 30747..32954 | - | 2208 | WP_001462104.1 | type IV conjugative transfer system coupling protein TraD | - |
| NBY13_RS24595 (NBY13_24595) | 33207..33938 | - | 732 | WP_001462105.1 | conjugal transfer complement resistance protein TraT | - |
| NBY13_RS24600 (NBY13_24600) | 33970..34473 | - | 504 | WP_000605509.1 | hypothetical protein | - |
| NBY13_RS24605 (NBY13_24605) | 34488..37310 | - | 2823 | WP_001462106.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NBY13_RS24610 (NBY13_24610) | 37307..38680 | - | 1374 | WP_032241676.1 | conjugal transfer pilus assembly protein TraH | - |
| NBY13_RS24615 (NBY13_24615) | 38667..39059 | - | 393 | WP_000660703.1 | F-type conjugal transfer protein TrbF | - |
| NBY13_RS24620 (NBY13_24620) | 39040..39327 | - | 288 | WP_250838138.1 | P-type conjugative transfer protein TrbJ | - |
| NBY13_RS24625 (NBY13_24625) | 39317..39862 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NBY13_RS24630 (NBY13_24630) | 39849..40133 | - | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY13_RS24635 (NBY13_24635) | 40260..40598 | - | 339 | WP_001287901.1 | conjugal transfer protein TrbA | - |
| NBY13_RS24640 (NBY13_24640) | 40614..41357 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NBY13_RS24645 (NBY13_24645) | 41350..41607 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| NBY13_RS24650 (NBY13_24650) | 41634..43484 | - | 1851 | WP_032241672.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NBY13_RS24655 (NBY13_24655) | 43481..44119 | - | 639 | WP_217290945.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NBY13_RS24660 (NBY13_24660) | 44128..44433 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| NBY13_RS24665 (NBY13_24665) | 44463..45455 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| NBY13_RS24670 (NBY13_24670) | 45452..46084 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| NBY13_RS24675 (NBY13_24675) | 46081..46467 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| NBY13_RS24680 (NBY13_24680) | 46464..49094 | - | 2631 | WP_000069752.1 | type IV secretion system protein TraC | - |
| NBY13_RS24685 (NBY13_24685) | 49259..49888 | - | 630 | Protein_61 | TraC family protein | - |
| NBY13_RS24690 (NBY13_24690) | 50014..50361 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| NBY13_RS24695 (NBY13_24695) | 50389..50607 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| NBY13_RS24700 (NBY13_24700) | 50687..51163 | - | 477 | WP_124827459.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|