MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NZ_CP098219 Location: 1130882..1179847 Organism: Escherichia coli strain Z0117EC0013 Replicon: chromosome
Accession: NZ_CP098219 Location: 1130882..1179847 Organism: Escherichia coli strain Z0117EC0013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY13_RS05285 (1126176) | 1126176..1126577 | + | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
| NBY13_RS05290 (1126616) | 1126616..1127671 | - | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| NBY13_RS05295 (1127960) | 1127960..1129063 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NBY13_RS05300 (1129075) | 1129075..1130328 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NBY13_RS05310 (1130533) | 1130533..1130736 | - | 204 | Protein_1019 | integrase | - |
| NBY13_RS05315 (1130882) | 1130882..1131352 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| NBY13_RS05320 (1131330) | 1131330..1131488 | - | 159 | WP_071550417.1 | ash family protein | - |
| NBY13_RS05325 (1131695) | 1131695..1132942 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| NBY13_RS05330 (1132932) | 1132932..1134569 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| NBY13_RS05335 (1134563) | 1134563..1137661 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| NBY13_RS05340 (1137945) | 1137945..1138727 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NBY13_RS05345 (1138714) | 1138714..1139634 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NBY13_RS05350 (1139799) | 1139799..1140575 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| NBY13_RS05355 (1140783) | 1140783..1141118 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| NBY13_RS05360 (1141345) | 1141345..1141503 | - | 159 | Protein_1029 | integrase | - |
| NBY13_RS05365 (1141552) | 1141552..1141737 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| NBY13_RS05370 (1141952) | 1141952..1142566 | + | 615 | WP_001019923.1 | YagU family protein | - |
| NBY13_RS05375 (1142637) | 1142637..1142803 | + | 167 | Protein_1032 | tail fiber assembly protein | - |
| NBY13_RS05380 (1142815) | 1142815..1143144 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| NBY13_RS05385 (1143451) | 1143451..1144161 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| NBY13_RS05390 (1144130) | 1144130..1145773 | - | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| NBY13_RS05395 (1145763) | 1145763..1148288 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| NBY13_RS05400 (1148314) | 1148314..1148982 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| NBY13_RS05405 (1149039) | 1149039..1149626 | - | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NBY13_RS05410 (1149701) | 1149701..1150243 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| NBY13_RS05415 (1151067) | 1151067..1151292 | + | 226 | Protein_1040 | protein YkgL | - |
| NBY13_RS05420 (1151327) | 1151327..1151467 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NBY13_RS05425 (1151467) | 1151467..1151730 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NBY13_RS24925 (1152066) | 1152066..1152149 | - | 84 | Protein_1043 | hypothetical protein | - |
| NBY13_RS05435 (1152669) | 1152669..1153811 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| NBY13_RS05440 (1153984) | 1153984..1154904 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| NBY13_RS05445 (1155061) | 1155061..1155987 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| NBY13_RS05450 (1156187) | 1156187..1157080 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| NBY13_RS05455 (1157111) | 1157111..1158100 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| NBY13_RS05460 (1158127) | 1158127..1158978 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| NBY13_RS05465 (1159544) | 1159544..1163791 | + | 4248 | WP_250838125.1 | hypothetical protein | VF |
| NBY13_RS05470 (1163916) | 1163916..1164773 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| NBY13_RS05475 (1165021) | 1165021..1165890 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| NBY13_RS05480 (1166050) | 1166050..1166643 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| NBY13_RS05485 (1166655) | 1166655..1166891 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NBY13_RS05490 (1167000) | 1167000..1168325 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NBY13_RS05495 (1168552) | 1168552..1169406 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NBY13_RS05500 (1169932) | 1169932..1170651 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| NBY13_RS05505 (1170662) | 1170662..1172089 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NBY13_RS05510 (1172082) | 1172082..1172777 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| NBY13_RS05515 (1173020) | 1173020..1173688 | - | 669 | WP_001545820.1 | protein YkgH | - |
| NBY13_RS24930 (1173872) | 1173872..1176163 | - | 2292 | WP_000798071.1 | outer membrane autotransporter HyxB | - |
| NBY13_RS05530 (1176205) | 1176205..1176966 | - | 762 | WP_001524129.1 | protein HyxA | - |
| NBY13_RS05535 (1177120) | 1177120..1177914 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| NBY13_RS05540 (1178244) | 1178244..1178807 | - | 564 | WP_053895706.1 | ISKra4 family transposase ISCep1 | VF |
| NBY13_RS05545 (1179889) | 1179889..1181559 | - | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| NBY13_RS05550 (1181573) | 1181573..1183045 | - | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| NBY13_RS05555 (1183059) | 1183059..1183646 | - | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|