MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73614 bp
Accession: NZ_CP098217 Location: 4144943..4218556 Organism: Escherichia coli strain Z0117EC0032 Replicon: chromosome
Accession: NZ_CP098217 Location: 4144943..4218556 Organism: Escherichia coli strain Z0117EC0032 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY14_RS19665 (4140245) | 4140245..4141501 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| NBY14_RS19670 (4141550) | 4141550..4143685 | - | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| NBY14_RS19675 (4143847) | 4143847..4143924 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| NBY14_RS19680 (4144077) | 4144077..4144784 | + | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| NBY14_RS19690 (4145163) | 4145163..4146428 | + | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| NBY14_RS19695 (4146684) | 4146684..4147727 | + | 1044 | WP_000147018.1 | hypothetical protein | - |
| NBY14_RS19700 (4148257) | 4148257..4148954 | + | 698 | WP_224181008.1 | IS1 family transposase IS1A | Transposase |
| NBY14_RS19705 (4148971) | 4148971..4149762 | + | 792 | Protein_3846 | IS3 family transposase | - |
| NBY14_RS19710 (4149929) | 4149929..4150480 | + | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| NBY14_RS19720 (4151787) | 4151787..4153286 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| NBY14_RS19725 (4153361) | 4153361..4155730 | - | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| NBY14_RS19730 (4155835) | 4155835..4157304 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| NBY14_RS19735 (4157557) | 4157557..4158250 | + | 694 | Protein_3852 | IS1 family transposase IS1N | Transposase |
| NBY14_RS19740 (4158868) | 4158868..4159215 | + | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| NBY14_RS19745 (4159285) | 4159285..4159542 | + | 258 | Protein_3854 | IS3 family transposase IS911 | Transposase |
| NBY14_RS19750 (4159555) | 4159555..4159728 | - | 174 | Protein_3855 | hypothetical protein | - |
| NBY14_RS19755 (4159740) | 4159740..4160219 | - | 480 | Protein_3856 | IS3 family transposase IS629 | Transposase |
| NBY14_RS19760 (4160303) | 4160303..4161811 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| NBY14_RS24570 (4161850) | 4161850..4161972 | - | 123 | WP_001406634.1 | hypothetical protein | - |
| NBY14_RS19765 (4162483) | 4162483..4162872 | - | 390 | Protein_3859 | IS3 family transposase | - |
| NBY14_RS19770 (4162867) | 4162867..4163658 | + | 792 | Protein_3860 | ATP-dependent helicase | - |
| NBY14_RS19775 (4163706) | 4163706..4164029 | - | 324 | WP_001564033.1 | hypothetical protein | - |
| NBY14_RS19780 (4164094) | 4164094..4164738 | - | 645 | WP_001564034.1 | hypothetical protein | - |
| NBY14_RS19785 (4164759) | 4164759..4165028 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| NBY14_RS19790 (4165107) | 4165107..4165745 | - | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| NBY14_RS19795 (4165730) | 4165730..4166962 | - | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| NBY14_RS19800 (4167103) | 4167103..4167747 | - | 645 | WP_024196335.1 | hypothetical protein | - |
| NBY14_RS19805 (4167864) | 4167864..4169211 | - | 1348 | Protein_3867 | VasL domain-containing protein | - |
| NBY14_RS19810 (4169263) | 4169263..4169449 | - | 187 | Protein_3868 | hypothetical protein | - |
| NBY14_RS19815 (4169605) | 4169605..4171350 | - | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| NBY14_RS19820 (4171493) | 4171493..4171753 | - | 261 | Protein_3870 | IS3 family transposase ISLad1 | Transposase |
| NBY14_RS19825 (4172474) | 4172474..4172665 | + | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| NBY14_RS19830 (4172718) | 4172718..4172951 | - | 234 | WP_000124185.1 | hypothetical protein | - |
| NBY14_RS19835 (4173047) | 4173047..4173547 | - | 501 | Protein_3873 | DNA-binding protein | - |
| NBY14_RS19840 (4173904) | 4173904..4175022 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| NBY14_RS19845 (4175162) | 4175162..4175848 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| NBY14_RS19850 (4175903) | 4175903..4176661 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| NBY14_RS19855 (4176645) | 4176645..4177370 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| NBY14_RS19860 (4177382) | 4177382..4177651 | + | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| NBY14_RS19865 (4177679) | 4177679..4178176 | + | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| NBY14_RS19870 (4178205) | 4178205..4179401 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| NBY14_RS19875 (4179686) | 4179686..4179967 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| NBY14_RS19880 (4179989) | 4179989..4180774 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| NBY14_RS19885 (4180835) | 4180835..4182352 | + | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| NBY14_RS19890 (4182376) | 4182376..4182675 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| NBY14_RS19895 (4182686) | 4182686..4183261 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| NBY14_RS19900 (4183310) | 4183310..4185862 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| NBY14_RS19905 (4185971) | 4185971..4186888 | + | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| NBY14_RS19910 (4187025) | 4187025..4187930 | + | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| NBY14_RS19915 (4188416) | 4188416..4188955 | + | 540 | WP_001564045.1 | hypothetical protein | - |
| NBY14_RS19920 (4188983) | 4188983..4189504 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| NBY14_RS19925 (4190120) | 4190120..4191382 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| NBY14_RS19930 (4191399) | 4191399..4192454 | + | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| NBY14_RS19935 (4192583) | 4192583..4193734 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| NBY14_RS19940 (4193779) | 4193779..4194324 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| NBY14_RS19945 (4194681) | 4194681..4194866 | - | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| NBY14_RS19950 (4194997) | 4194997..4195668 | - | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| NBY14_RS19955 (4195768) | 4195768..4196925 | - | 1158 | Protein_3897 | Multidrug resistance protein MexB | VF |
| NBY14_RS19960 (4197016) | 4197016..4197282 | + | 267 | Protein_3898 | IS3 family transposase IS2 | Transposase |
| NBY14_RS19965 (4197268) | 4197268..4197330 | - | 63 | Protein_3899 | IS3 family transposase IS2 | Transposase |
| NBY14_RS24575 (4197459) | 4197459..4197584 | - | 126 | WP_001342704.1 | hypothetical protein | - |
| NBY14_RS19970 (4197581) | 4197581..4197814 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| NBY14_RS19975 (4197883) | 4197883..4198458 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| NBY14_RS19980 (4198716) | 4198716..4199282 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| NBY14_RS19985 (4200583) | 4200583..4201677 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| NBY14_RS19990 (4201696) | 4201696..4202946 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| NBY14_RS19995 (4203030) | 4203030..4203965 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| NBY14_RS20000 (4203958) | 4203958..4204893 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| NBY14_RS20005 (4205429) | 4205429..4205881 | - | 453 | WP_000558152.1 | acyltransferase | - |
| NBY14_RS20010 (4206402) | 4206402..4207133 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| NBY14_RS20015 (4207803) | 4207803..4208333 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| NBY14_RS20020 (4209496) | 4209496..4210719 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| NBY14_RS20025 (4210820) | 4210820..4211704 | + | 885 | WP_001564055.1 | YfjP family GTPase | - |
| NBY14_RS20030 (4211907) | 4211907..4212587 | + | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| NBY14_RS20035 (4212738) | 4212738..4213415 | + | 678 | WP_001564058.1 | hypothetical protein | - |
| NBY14_RS20040 (4213421) | 4213421..4213654 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| NBY14_RS20045 (4213744) | 4213744..4214562 | + | 819 | WP_001564059.1 | DUF932 domain-containing protein | - |
| NBY14_RS20050 (4214828) | 4214828..4215307 | + | 480 | WP_001564060.1 | antirestriction protein | - |
| NBY14_RS20055 (4215323) | 4215323..4215799 | + | 477 | WP_021553055.1 | RadC family protein | - |
| NBY14_RS20060 (4215864) | 4215864..4216085 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| NBY14_RS20065 (4216248) | 4216248..4216616 | + | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NBY14_RS20070 (4216706) | 4216706..4217083 | + | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| NBY14_RS20075 (4217080) | 4217080..4217229 | + | 150 | Protein_3922 | DUF5983 family protein | - |
| NBY14_RS20080 (4217308) | 4217308..4217502 | + | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| NBY14_RS20085 (4217587) | 4217587..4218429 | + | 843 | Protein_3924 | DUF4942 domain-containing protein | - |
| NBY14_RS20090 (4218772) | 4218772..4218942 | + | 171 | Protein_3925 | IS110 family transposase | - |
| NBY14_RS20095 (4219752) | 4219752..4220735 | + | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| NBY14_RS20100 (4220807) | 4220807..4221955 | + | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|