MGE detailed information
MGE type: Conjugative plasmid MGE length: 115561 bp
Accession: NZ_CP098212 Location: 1..115561 Organism: Escherichia coli strain Z0117EC0040 Replicon: plasmid pZ0117EC0040-1
Accession: NZ_CP098212 Location: 1..115561 Organism: Escherichia coli strain Z0117EC0040 Replicon: plasmid pZ0117EC0040-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY16_RS23290 (713) | 713..2479 | - | 1767 | Protein_1 | Tn3 family transposase | - |
| NBY16_RS23295 (2531) | 2531..3235 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| NBY16_RS23300 (3482) | 3482..3955 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| NBY16_RS23305 (4111) | 4111..5007 | + | 897 | Protein_4 | IS91 family transposase ISAzo26 | Transposase |
| NBY16_RS23310 (5061) | 5061..5765 | - | 705 | WP_001067858.1 | IS4 family transposase IS10R | Transposase |
| NBY16_RS23315 (5829) | 5829..6194 | + | 366 | Protein_6 | IS4 family transposase IS10R | Transposase |
| NBY16_RS23320 (6439) | 6439..7314 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| NBY16_RS23325 (7349) | 7349..8317 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| NBY16_RS23330 (8374) | 8374..9471 | + | 1098 | Protein_9 | TonB-dependent receptor | - |
| NBY16_RS23335 (9735) | 9735..10439 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| NBY16_RS23340 (10464) | 10464..10790 | + | 327 | WP_085654794.1 | hypothetical protein | - |
| NBY16_RS23345 (10858) | 10858..11640 | + | 783 | WP_001372173.1 | site-specific integrase | - |
| NBY16_RS23350 (11778) | 11778..12053 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| NBY16_RS23355 (12047) | 12047..12691 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| NBY16_RS23360 (12920) | 12920..13891 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| NBY16_RS23365 (13896) | 13896..14288 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| NBY16_RS23370 (14293) | 14293..15564 | - | 1272 | WP_000457523.1 | Y-family DNA polymerase | - |
| NBY16_RS23375 (15564) | 15564..16001 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NBY16_RS23380 (15998) | 15998..16246 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NBY16_RS23385 (16664) | 16664..17566 | + | 903 | WP_072748701.1 | DUF1281 domain-containing protein | - |
| NBY16_RS23390 (17563) | 17563..17874 | + | 312 | WP_032072582.1 | hypothetical protein | - |
| NBY16_RS23395 (17951) | 17951..18634 | + | 684 | WP_000086147.1 | DNA methylase | - |
| NBY16_RS23400 (18635) | 18635..18856 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| NBY16_RS23405 (18870) | 18870..19304 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| NBY16_RS23410 (19350) | 19350..20126 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| NBY16_RS23415 (20538) | 20538..20963 | + | 426 | WP_001579750.1 | antirestriction protein | - |
| NBY16_RS23420 (21010) | 21010..21432 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| NBY16_RS23425 (21429) | 21429..21620 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| NBY16_RS23430 (21691) | 21691..22005 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| NBY16_RS23435 (22389) | 22389..22916 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| NBY16_RS23440 (22974) | 22974..23207 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| NBY16_RS23445 (23266) | 23266..25224 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY16_RS23450 (25279) | 25279..25713 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| NBY16_RS23455 (25710) | 25710..26429 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NBY16_RS23460 (26426) | 26426..27022 | + | 597 | Protein_35 | hypothetical protein | - |
| NBY16_RS23465 (27484) | 27484..27984 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| NBY16_RS23470 (28713) | 28713..29147 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NBY16_RS23475 (29241) | 29241..29507 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NBY16_RS23480 (29572) | 29572..30498 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| NBY16_RS23485 (30521) | 30521..30718 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| NBY16_RS23490 (30749) | 30749..31000 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NBY16_RS23495 (31581) | 31581..32429 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| NBY16_RS23500 (32515) | 32515..32850 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| NBY16_RS23505 (33084) | 33084..33416 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NBY16_RS23510 (33427) | 33427..36126 | + | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| NBY16_RS23515 (36163) | 36163..38454 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| NBY16_RS23520 (38447) | 38447..39517 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| NBY16_RS23525 (39536) | 39536..40744 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (40924) | 40924..40984 | - | 61 | NuclAT_1 | - | - |
| - (40924) | 40924..40984 | - | 61 | NuclAT_1 | - | - |
| - (40924) | 40924..40984 | - | 61 | NuclAT_1 | - | - |
| - (40924) | 40924..40984 | - | 61 | NuclAT_1 | - | - |
| NBY16_RS23530 (41051) | 41051..41830 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (42345) | 42345..42407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (42345) | 42345..42407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (42345) | 42345..42407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (42345) | 42345..42407 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| NBY16_RS23535 (42457) | 42457..42609 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| NBY16_RS23540 (42681) | 42681..42932 | - | 252 | WP_001291968.1 | hypothetical protein | - |
| - (43319) | 43319..43370 | - | 52 | NuclAT_2 | - | - |
| - (43319) | 43319..43370 | - | 52 | NuclAT_2 | - | - |
| - (43319) | 43319..43370 | - | 52 | NuclAT_2 | - | - |
| - (43319) | 43319..43370 | - | 52 | NuclAT_2 | - | - |
| NBY16_RS23545 (43921) | 43921..45090 | + | 1170 | Protein_52 | IS3 family transposase ISEc52 | Transposase |
| NBY16_RS23550 (45109) | 45109..45285 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| NBY16_RS23555 (45494) | 45494..45703 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| NBY16_RS23560 (45801) | 45801..46415 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NBY16_RS23565 (46491) | 46491..48659 | - | 2169 | WP_000698355.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| NBY16_RS23570 (48756) | 48756..49340 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| NBY16_RS23575 (49369) | 49369..50571 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| NBY16_RS23580 (50538) | 50538..51152 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NBY16_RS23585 (51152) | 51152..54196 | - | 3045 | WP_064203881.1 | IncI1-type conjugal transfer protein TraU | - |
| NBY16_RS23590 (54286) | 54286..55086 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NBY16_RS23595 (55070) | 55070..55258 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NBY16_RS23600 (55322) | 55322..55726 | - | 405 | WP_001579770.1 | hypothetical protein | - |
| NBY16_RS23605 (55777) | 55777..56304 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NBY16_RS23610 (56304) | 56304..57008 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NBY16_RS23615 (57008) | 57008..58297 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| NBY16_RS23620 (58300) | 58300..59283 | - | 984 | WP_001579769.1 | hypothetical protein | VF |
| NBY16_RS23625 (59294) | 59294..59986 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NBY16_RS23630 (59983) | 59983..60330 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NBY16_RS23635 (60348) | 60348..64115 | - | 3768 | WP_001579768.1 | DUF5710 domain-containing protein | - |
| NBY16_RS23640 (64205) | 64205..64756 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| NBY16_RS23645 (64771) | 64771..65061 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| NBY16_RS23650 (65058) | 65058..66206 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NBY16_RS23655 (66203) | 66203..67021 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| NBY16_RS23660 (67018) | 67018..67476 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NBY16_RS23665 (67871) | 67871..68455 | - | 585 | WP_001579766.1 | histidine phosphatase family protein | - |
| NBY16_RS23670 (68515) | 68515..69717 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| NBY16_RS23675 (69803) | 69803..70627 | - | 825 | WP_001238929.1 | conjugal transfer protein TraE | - |
| NBY16_RS23680 (70778) | 70778..71932 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| NBY16_RS23685 (71931) | 71931..72284 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| NBY16_RS23690 (73453) | 73453..73701 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| NBY16_RS23695 (73698) | 73698..74990 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| NBY16_RS23700 (74990) | 74990..75646 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| NBY16_RS23705 (75631) | 75631..76191 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| NBY16_RS23710 (76201) | 76201..76815 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| NBY16_RS23715 (76833) | 76833..77930 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NBY16_RS23720 (77943) | 77943..79496 | - | 1554 | WP_001579763.1 | hypothetical protein | VF |
| NBY16_RS23725 (79507) | 79507..79959 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| NBY16_RS23730 (79946) | 79946..81243 | - | 1298 | Protein_89 | type 4b pilus protein PilO2 | - |
| NBY16_RS23735 (81297) | 81297..81464 | - | 168 | WP_250838363.1 | hypothetical protein | - |
| NBY16_RS23740 (81710) | 81710..81883 | - | 174 | WP_250838364.1 | hypothetical protein | - |
| NBY16_RS23745 (81998) | 81998..82150 | - | 153 | WP_250838365.1 | hypothetical protein | VF |
| NBY16_RS23750 (82289) | 82289..82528 | - | 240 | WP_250838366.1 | hypothetical protein | - |
| NBY16_RS23755 (82764) | 82764..82934 | - | 171 | WP_250838367.1 | hypothetical protein | - |
| NBY16_RS23760 (82949) | 82949..83113 | - | 165 | WP_001442751.1 | type IV pilus biogenesis protein PilM | - |
| NBY16_RS23765 (83391) | 83391..84460 | - | 1070 | Protein_96 | TcpQ domain-containing protein | - |
| NBY16_RS23770 (85083) | 85083..85379 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| NBY16_RS23775 (85555) | 85555..85809 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NBY16_RS23780 (85972) | 85972..86418 | - | 447 | WP_250130491.1 | hypothetical protein | - |
| NBY16_RS23785 (86695) | 86695..87378 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| NBY16_RS23790 (87712) | 87712..88164 | - | 453 | WP_250838368.1 | transcription termination/antitermination NusG family protein | - |
| NBY16_RS23795 (88611) | 88611..88892 | - | 282 | Protein_102 | conjugal transfer protein TraA | - |
| NBY16_RS23800 (88930) | 88930..89088 | - | 159 | Protein_103 | ash family protein | - |
| NBY16_RS23805 (90018) | 90018..91049 | + | 1032 | WP_000907866.1 | plasmid replication initiator RepA | - |
| NBY16_RS23810 (91747) | 91747..91962 | + | 216 | WP_000841013.1 | hypothetical protein | - |
| NBY16_RS23815 (91959) | 91959..92951 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| NBY16_RS23820 (93010) | 93010..93627 | - | 618 | WP_000521604.1 | ProQ/FINO family protein | - |
| NBY16_RS23825 (93822) | 93822..95378 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| NBY16_RS23830 (95643) | 95643..96233 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| NBY16_RS23835 (96233) | 96233..96490 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| NBY16_RS23840 (96819) | 96819..97922 | + | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| NBY16_RS23845 (97952) | 97952..99082 | + | 1131 | WP_000542417.1 | DUF4238 domain-containing protein | - |
| NBY16_RS23850 (99082) | 99082..99372 | + | 291 | WP_001229373.1 | hypothetical protein | - |
| NBY16_RS23855 (99891) | 99891..101024 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| NBY16_RS23860 (101044) | 101044..101328 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| NBY16_RS23865 (101499) | 101499..102146 | - | 648 | WP_000074712.1 | hypothetical protein | - |
| NBY16_RS23870 (102134) | 102134..102556 | - | 423 | WP_001372177.1 | hypothetical protein | - |
| NBY16_RS23875 (102649) | 102649..103230 | - | 582 | WP_000139427.1 | hypothetical protein | - |
| NBY16_RS23880 (103832) | 103832..104536 | - | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| NBY16_RS23885 (104602) | 104602..105147 | + | 546 | Protein_120 | penicillin-binding transpeptidase domain-containing protein | - |
| NBY16_RS23890 (105212) | 105212..106069 | + | 858 | WP_012477595.1 | Beta-lactamase TEM | ARG |
| NBY16_RS23895 (106118) | 106118..107271 | - | 1154 | Protein_122 | IS3 family transposase ISAs17 | Transposase |
| NBY16_RS23900 (107666) | 107666..108322 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| NBY16_RS23905 (108641) | 108641..109069 | - | 429 | Protein_124 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NBY16_RS23910 (109102) | 109102..110493 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| NBY16_RS23915 (110530) | 110530..111102 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| NBY16_RS23920 (111239) | 111239..111784 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| NBY16_RS23925 (111988) | 111988..112824 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| NBY16_RS23930 (112824) | 112824..113627 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NBY16_RS23935 (113688) | 113688..114503 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| NBY16_RS23940 (114833) | 114833..114919 | + | 87 | Protein_131 | Arm DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|