MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 67712 bp
Accession: NZ_CP098210 Location: 915510..983221 Organism: Escherichia coli strain Z0117EC0051 Replicon: chromosome
Accession: NZ_CP098210 Location: 915510..983221 Organism: Escherichia coli strain Z0117EC0051 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY17_RS04230 (912111) | 912111..913259 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| NBY17_RS04235 (913331) | 913331..914314 | - | 984 | WP_001361242.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| NBY17_RS04240 (915125) | 915125..915295 | - | 171 | Protein_824 | IS110 family transposase | - |
| NBY17_RS04245 (915637) | 915637..916479 | - | 843 | Protein_825 | DUF4942 domain-containing protein | - |
| NBY17_RS04250 (916564) | 916564..916758 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| NBY17_RS04255 (916837) | 916837..916986 | - | 150 | Protein_827 | DUF5983 family protein | - |
| NBY17_RS04260 (916983) | 916983..917360 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| NBY17_RS04265 (917450) | 917450..917818 | - | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NBY17_RS04270 (917981) | 917981..918202 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| NBY17_RS04275 (918267) | 918267..918743 | - | 477 | WP_021553055.1 | RadC family protein | - |
| NBY17_RS04280 (918759) | 918759..919238 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| NBY17_RS04285 (919504) | 919504..920322 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| NBY17_RS04290 (920412) | 920412..920645 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| NBY17_RS04295 (920651) | 920651..921328 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| NBY17_RS04300 (921479) | 921479..922159 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| NBY17_RS04305 (922362) | 922362..923246 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| NBY17_RS04310 (923347) | 923347..924570 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| NBY17_RS04315 (925733) | 925733..926263 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| NBY17_RS04320 (926583) | 926583..928121 | - | 1539 | WP_001550332.1 | IS66 family transposase ISEc8 | Transposase |
| NBY17_RS04325 (928171) | 928171..928518 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NBY17_RS04330 (928515) | 928515..928895 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| NBY17_RS04335 (929383) | 929383..930114 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| NBY17_RS04340 (930635) | 930635..931087 | + | 453 | WP_000558152.1 | acyltransferase | - |
| NBY17_RS04345 (931623) | 931623..932558 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| NBY17_RS04350 (932551) | 932551..933486 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| NBY17_RS04355 (933570) | 933570..934820 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| NBY17_RS04360 (934839) | 934839..935933 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| NBY17_RS04365 (937234) | 937234..937800 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| NBY17_RS04370 (938058) | 938058..938633 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| NBY17_RS04375 (938702) | 938702..938935 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| NBY17_RS24185 (938932) | 938932..939057 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| NBY17_RS04380 (939186) | 939186..939248 | + | 63 | Protein_853 | IS3 family transposase IS2 | Transposase |
| NBY17_RS04385 (939234) | 939234..939500 | - | 267 | Protein_854 | IS3 family transposase IS2 | Transposase |
| NBY17_RS04390 (939591) | 939591..940748 | + | 1158 | Protein_855 | Multidrug resistance protein MexB | VF |
| NBY17_RS04395 (940848) | 940848..941519 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| NBY17_RS04400 (941650) | 941650..941835 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| NBY17_RS04405 (942192) | 942192..942737 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| NBY17_RS04410 (942782) | 942782..943933 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| NBY17_RS04415 (944062) | 944062..945117 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| NBY17_RS04420 (945134) | 945134..946396 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| NBY17_RS04425 (946979) | 946979..947500 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| NBY17_RS04430 (947528) | 947528..948067 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| NBY17_RS04435 (948553) | 948553..949458 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| NBY17_RS04440 (949595) | 949595..950512 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| NBY17_RS04445 (950621) | 950621..953173 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| NBY17_RS04450 (953222) | 953222..953797 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| NBY17_RS04455 (953808) | 953808..954107 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| NBY17_RS04460 (954131) | 954131..955648 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| NBY17_RS04465 (955709) | 955709..956494 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| NBY17_RS04470 (956516) | 956516..956797 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| NBY17_RS04475 (957082) | 957082..958278 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| NBY17_RS04480 (958307) | 958307..958804 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| NBY17_RS04485 (958832) | 958832..959101 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| NBY17_RS04490 (959113) | 959113..959838 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| NBY17_RS04495 (959822) | 959822..960580 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| NBY17_RS04500 (960635) | 960635..961321 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| NBY17_RS04505 (961461) | 961461..962579 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| NBY17_RS04510 (962936) | 962936..963436 | + | 501 | Protein_879 | DNA-binding protein | - |
| NBY17_RS04515 (963532) | 963532..963765 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| NBY17_RS04520 (963818) | 963818..964009 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| NBY17_RS24190 (964457) | 964457..964585 | + | 129 | WP_001364398.1 | hypothetical protein | - |
| NBY17_RS04525 (964730) | 964730..964990 | + | 261 | Protein_883 | IS3 family transposase ISLad1 | Transposase |
| NBY17_RS04530 (965133) | 965133..966878 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| NBY17_RS04535 (967034) | 967034..967220 | + | 187 | Protein_885 | hypothetical protein | - |
| NBY17_RS04540 (967272) | 967272..967451 | + | 180 | Protein_886 | hypothetical protein | VF |
| NBY17_RS04545 (967448) | 967448..967861 | + | 414 | Protein_887 | group II intron maturase-specific domain-containing protein | - |
| NBY17_RS04550 (967945) | 967945..968424 | + | 480 | Protein_888 | IS3 family transposase IS629 | Transposase |
| NBY17_RS04555 (968436) | 968436..968609 | + | 174 | Protein_889 | hypothetical protein | - |
| NBY17_RS04560 (968622) | 968622..968879 | - | 258 | Protein_890 | IS3 family transposase IS911 | Transposase |
| NBY17_RS04565 (968949) | 968949..969296 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| NBY17_RS04570 (969914) | 969914..970607 | - | 694 | Protein_892 | IS1 family transposase IS1N | Transposase |
| NBY17_RS04575 (970860) | 970860..972329 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| NBY17_RS04580 (972434) | 972434..974803 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| NBY17_RS04585 (974878) | 974878..976377 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| NBY17_RS04590 (976520) | 976520..977217 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| NBY17_RS04595 (977684) | 977684..978235 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| NBY17_RS04600 (978402) | 978402..979193 | - | 792 | Protein_898 | IS3 family transposase | - |
| NBY17_RS04610 (980437) | 980437..981480 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| NBY17_RS04615 (981736) | 981736..983001 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| NBY17_RS04625 (983380) | 983380..984087 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| NBY17_RS04630 (984240) | 984240..984317 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| NBY17_RS04635 (984480) | 984480..986615 | + | 2136 | WP_000839790.1 | ornithine decarboxylase | - |
| NBY17_RS04640 (986664) | 986664..987920 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|