MGE detailed information
MGE type: Conjugative plasmid MGE length: 131380 bp
Accession: NZ_CP098208 Location: 1..131380 Organism: Escherichia coli strain Z0117EC0054 Replicon: plasmid pZ0117ECO054-2
Accession: NZ_CP098208 Location: 1..131380 Organism: Escherichia coli strain Z0117EC0054 Replicon: plasmid pZ0117ECO054-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY18_RS25705 (31) | 31..920 | - | 890 | Protein_1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| NBY18_RS25710 (1299) | 1299..1996 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
| NBY18_RS25715 (2176) | 2176..2689 | - | 514 | Protein_3 | DUF4113 domain-containing protein | - |
| NBY18_RS25720 (2750) | 2750..2854 | - | 105 | Protein_4 | AAA family ATPase | - |
| NBY18_RS25725 (2856) | 2856..3179 | - | 324 | Protein_5 | IS21 family transposase IS21 | Transposase |
| NBY18_RS25730 (3925) | 3925..4902 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NBY18_RS25735 (5187) | 5187..5927 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| NBY18_RS25740 (6048) | 6048..6236 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| NBY18_RS25745 (6610) | 6610..7512 | - | 903 | WP_001350955.1 | hypothetical protein | VF |
| NBY18_RS25750 (7581) | 7581..8690 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| NBY18_RS25755 (9123) | 9123..10076 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| NBY18_RS25760 (11373) | 11373..11552 | - | 180 | Protein_12 | integrase core domain-containing protein | - |
| NBY18_RS25765 (11691) | 11691..12904 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| NBY18_RS25770 (13052) | 13052..13377 | - | 326 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| NBY18_RS25775 (13423) | 13423..13763 | + | 341 | Protein_15 | IS3 family transposase | - |
| NBY18_RS25780 (14358) | 14358..15545 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NBY18_RS25785 (15542) | 15542..17482 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| NBY18_RS25790 (17486) | 17486..18856 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| NBY18_RS25795 (19330) | 19330..19524 | + | 195 | Protein_19 | IS200-IS605 family transposase IS200C | Transposase |
| NBY18_RS25800 (19653) | 19653..20594 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| NBY18_RS25805 (20829) | 20829..22218 | - | 1390 | Protein_21 | ISNCY family transposase ISKpn21 | Transposase |
| NBY18_RS25810 (22528) | 22528..22677 | - | 150 | Protein_22 | IS3 family transposase | - |
| NBY18_RS25815 (22855) | 22855..24048 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| NBY18_RS25825 (27127) | 27127..27420 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| NBY18_RS25830 (27478) | 27478..27677 | - | 200 | Protein_26 | lysis protein | - |
| NBY18_RS25835 (28231) | 28231..29255 | + | 1025 | Protein_27 | integrase core domain-containing protein | - |
| NBY18_RS25840 (30566) | 30566..31681 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| NBY18_RS25845 (31821) | 31821..35480 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| NBY18_RS25850 (35584) | 35584..36813 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| NBY18_RS25855 (36898) | 36898..37854 | + | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| NBY18_RS25860 (37899) | 37899..40076 | - | 2178 | WP_001222183.1 | Ferric enterobactin receptor | VF |
| NBY18_RS25865 (40928) | 40928..41962 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| NBY18_RS25870 (42143) | 42143..42444 | + | 302 | Protein_34 | hypothetical protein | - |
| NBY18_RS25875 (42522) | 42522..42815 | - | 294 | WP_000269327.1 | DUF6404 family protein | - |
| NBY18_RS25880 (42983) | 42983..43108 | - | 126 | Protein_36 | type II toxin-antitoxin system toxin YacB | - |
| NBY18_RS25885 (43108) | 43108..43376 | - | 269 | Protein_37 | type II toxin-antitoxin system antitoxin YacA | - |
| NBY18_RS25890 (43987) | 43987..45261 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| NBY18_RS25895 (45254) | 45254..47350 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| NBY18_RS25900 (47520) | 47520..47831 | - | 312 | WP_001259758.1 | colicin V | - |
| NBY18_RS25905 (47809) | 47809..48045 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| NBY18_RS25910 (48164) | 48164..48607 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| NBY18_RS25915 (48579) | 48579..48983 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| NBY18_RS25920 (48985) | 48985..49254 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| NBY18_RS25925 (49251) | 49251..49517 | + | 267 | WP_001017350.1 | FAD-dependent oxidoreductase | - |
| NBY18_RS25930 (49573) | 49573..50025 | - | 453 | WP_000670963.1 | acyltransferase | - |
| NBY18_RS25935 (50318) | 50318..50578 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| NBY18_RS25940 (50575) | 50575..51165 | + | 591 | WP_001350923.1 | hypothetical protein | - |
| NBY18_RS25945 (51227) | 51227..51442 | - | 216 | Protein_49 | DUF6404 family protein | - |
| NBY18_RS25950 (51571) | 51571..51906 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| NBY18_RS25955 (51928) | 51928..53808 | - | 1881 | WP_001283335.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NBY18_RS25960 (53994) | 53994..54842 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| NBY18_RS25965 (54888) | 54888..55166 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NBY18_RS25970 (55166) | 55166..55435 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NBY18_RS25975 (56351) | 56351..57208 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| NBY18_RS25980 (57201) | 57201..57248 | - | 48 | WP_077822033.1 | hypothetical protein | - |
| NBY18_RS25985 (57239) | 57239..57475 | + | 237 | WP_223368648.1 | replication protein RepA | - |
| NBY18_RS25990 (57501) | 57501..57761 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| NBY18_RS25995 (57851) | 57851..58207 | - | 357 | Protein_59 | thermonuclease family protein | - |
| NBY18_RS26000 (58450) | 58450..58662 | - | 213 | WP_001311693.1 | hypothetical protein | - |
| NBY18_RS26005 (58800) | 58800..59360 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| NBY18_RS26010 (59415) | 59415..60161 | - | 747 | WP_000205759.1 | conjugal transfer pilus acetylase TraX | - |
| NBY18_RS26015 (60181) | 60181..65451 | - | 5271 | WP_000986993.1 | Multifunctional conjugation protein TraI | Relaxase |
| NBY18_RS26020 (65451) | 65451..67604 | - | 2154 | WP_001350920.1 | type IV conjugative transfer system coupling protein TraD | - |
| NBY18_RS26025 (67856) | 67856..68587 | - | 732 | WP_001447147.1 | conjugal transfer complement resistance protein TraT | - |
| NBY18_RS26030 (68619) | 68619..69122 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| NBY18_RS26035 (69137) | 69137..71961 | - | 2825 | Protein_67 | conjugal transfer mating-pair stabilization protein TraG | - |
| NBY18_RS26040 (71958) | 71958..73331 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| NBY18_RS26045 (73331) | 73331..73693 | - | 363 | WP_002430925.1 | P-type conjugative transfer protein TrbJ | - |
| NBY18_RS26050 (73623) | 73623..74168 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NBY18_RS26055 (74155) | 74155..74439 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY18_RS26060 (74558) | 74558..74905 | - | 348 | WP_001287676.1 | conjugal transfer protein TrbA | - |
| NBY18_RS26065 (74921) | 74921..75664 | - | 744 | WP_001030389.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NBY18_RS26070 (75657) | 75657..75914 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NBY18_RS26075 (75941) | 75941..77749 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NBY18_RS26080 (77746) | 77746..78384 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NBY18_RS26085 (78393) | 78393..79385 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| NBY18_RS26090 (79382) | 79382..80014 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| NBY18_RS26095 (80011) | 80011..80397 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| NBY18_RS26100 (80394) | 80394..83021 | - | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| NBY18_RS26105 (83181) | 83181..83402 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NBY18_RS26110 (83537) | 83537..84052 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NBY18_RS26115 (84049) | 84049..84300 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| NBY18_RS26120 (84312) | 84312..84509 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| NBY18_RS26125 (84496) | 84496..85086 | - | 591 | WP_000002792.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY18_RS26130 (85076) | 85076..86503 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NBY18_RS26135 (86503) | 86503..87231 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NBY18_RS26140 (87218) | 87218..87784 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| NBY18_RS26145 (87806) | 87806..88117 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NBY18_RS26150 (88132) | 88132..88497 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| NBY18_RS26155 (88530) | 88530..88931 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| NBY18_RS26160 (89024) | 89024..89713 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| NBY18_RS26165 (89900) | 89900..90283 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY18_RS26170 (90698) | 90698..91207 | + | 510 | WP_000759163.1 | hypothetical protein | VF |
| NBY18_RS26175 (91503) | 91503..92324 | - | 822 | WP_001234500.1 | DUF932 domain-containing protein | - |
| NBY18_RS26180 (92443) | 92443..92730 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| NBY18_RS26185 (93031) | 93031..93328 | + | 298 | Protein_97 | hypothetical protein | - |
| NBY18_RS26190 (93629) | 93629..93751 | - | 123 | WP_223195199.1 | Hok/Gef family protein | - |
| NBY18_RS26195 (93696) | 93696..93809 | - | 114 | Protein_99 | DUF5431 family protein | - |
| - (93843) | 93843..94054 | + | 212 | NuclAT_0 | - | - |
| - (93843) | 93843..94054 | - | 212 | NuclAT_0 | - | - |
| - (93843) | 93843..94054 | - | 212 | NuclAT_0 | - | - |
| - (93843) | 93843..94054 | - | 212 | NuclAT_0 | - | - |
| - (93843) | 93843..94054 | - | 212 | NuclAT_0 | - | - |
| NBY18_RS26200 (93999) | 93999..94785 | - | 787 | Protein_100 | plasmid SOS inhibition protein A | - |
| NBY18_RS26205 (94782) | 94782..95216 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| NBY18_RS26210 (95271) | 95271..97229 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY18_RS26215 (97293) | 97293..97526 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| NBY18_RS26220 (97624) | 97624..98121 | - | 498 | Protein_104 | single-stranded DNA-binding protein | - |
| NBY18_RS26225 (98422) | 98422..98841 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| NBY18_RS26230 (98927) | 98927..99490 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| NBY18_RS26235 (99538) | 99538..100899 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| NBY18_RS26240 (100951) | 100951..101181 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NBY18_RS26245 (101698) | 101698..101951 | + | 254 | Protein_109 | hypothetical protein | - |
| NBY18_RS26250 (102174) | 102174..102356 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| NBY18_RS26255 (102356) | 102356..102817 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| NBY18_RS26260 (102817) | 102817..103242 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| NBY18_RS26265 (103644) | 103644..104615 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| NBY18_RS26270 (104876) | 104876..105088 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| NBY18_RS26275 (105101) | 105101..105676 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| NBY18_RS26280 (105745) | 105745..106092 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| NBY18_RS26285 (106089) | 106089..106258 | - | 170 | Protein_117 | hypothetical protein | - |
| NBY18_RS26290 (106895) | 106895..107866 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NBY18_RS26295 (107866) | 107866..109032 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| NBY18_RS26555 (110255) | 110255..110350 | - | 96 | WP_000609144.1 | DinQ-like type I toxin DqlB | - |
| NBY18_RS26560 (111173) | 111173..111268 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| NBY18_RS26305 (111637) | 111637..111804 | - | 168 | WP_000638861.1 | hypothetical protein | - |
| NBY18_RS26310 (112054) | 112054..112668 | - | 615 | WP_225089852.1 | hypothetical protein | - |
| NBY18_RS26315 (112821) | 112821..113555 | - | 735 | WP_250789184.1 | hypothetical protein | - |
| NBY18_RS26320 (114172) | 114172..114597 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| NBY18_RS26325 (114739) | 114739..115218 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| NBY18_RS26330 (115658) | 115658..116320 | + | 663 | WP_000163251.1 | hypothetical protein | - |
| NBY18_RS26340 (117553) | 117553..119754 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| NBY18_RS26345 (119780) | 119780..121113 | - | 1334 | Protein_131 | L-lysine N6-monooxygenase | VF |
| NBY18_RS26350 (121110) | 121110..122852 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| NBY18_RS26355 (122852) | 122852..123799 | - | 948 | WP_001622737.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| NBY18_RS26360 (123800) | 123800..125524 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| NBY18_RS26365 (125660) | 125660..126854 | + | 1195 | Protein_135 | MFS transporter | - |
| NBY18_RS26370 (127234) | 127234..127614 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| NBY18_RS26375 (127955) | 127955..128368 | - | 414 | Protein_137 | phosphopyruvate hydratase | - |
| NBY18_RS26380 (128366) | 128366..128624 | + | 259 | Protein_138 | Tn3 family transposase | - |
| NBY18_RS26565 (129012) | 129012..129185 | - | 174 | WP_284709657.1 | metal ABC transporter permease | - |
| NBY18_RS26570 (129223) | 129223..129483 | - | 261 | Protein_140 | metal ABC transporter permease | - |
| NBY18_RS26575 (129473) | 129473..129586 | - | 114 | WP_284709658.1 | hypothetical protein | - |
| NBY18_RS26390 (129723) | 129723..130587 | - | 865 | Protein_142 | Manganese transport system membrane protein MntB | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|