NZ_CP098206732558..922306

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 189749 bp
Accession: NZ_CP098206        Location: 732558..922306         Organism: Escherichia coli strain Z0117EC0054       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NBY18_RS03570 (728310) 728310..728930 - 621 WP_001125331.1 TIGR04211 family SH3 domain-containing protein -
NBY18_RS03575 (729172) 729172..730473 + 1302 WP_000046243.1 inorganic triphosphatase -
NBY18_RS03580 (730496) 730496..733336 + 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
NBY18_RS03585 (733384) 733384..734817 + 1434 WP_000869177.1 Bifunctional protein HldE VF
NBY18_RS03590 (734937) 734937..734996 - 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
- (734897) 734897..735038 + 142 NuclAT_0 - -
- (734897) 734897..735038 + 142 NuclAT_0 - -
- (734897) 734897..735038 + 142 NuclAT_0 - -
- (734897) 734897..735038 + 142 NuclAT_0 - -
NBY18_RS03595 (735236) 735236..736897 - 1662 WP_001298380.1 flotillin family protein -
NBY18_RS03600 (736924) 736924..737553 - 630 WP_000599932.1 DUF1449 family protein -
NBY18_RS03605 (737823) 737823..738023 + 201 WP_001296424.1 cell surface composition regulator GlgS -
NBY18_RS03610 (738058) 738058..738357 - 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
NBY18_RS03615 (738731) 738731..739384 + 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
NBY18_RS03620 (739438) 739438..740487 - 1050 WP_000631271.1 pilus protein -
NBY18_RS03625 (740484) 740484..741224 - 741 WP_001350725.1 putative fimbrial chaperone YfcS VF
NBY18_RS03630 (741240) 741240..743762 - 2523 WP_001060674.1 Outer membrane usher protein PapC VF
NBY18_RS03635 (743849) 743849..744412 - 564 WP_000915007.1 putative fimbrial-like protein YbgD VF
NBY18_RS03640 (744983) 744983..745153 + 171 WP_001296421.1 hypothetical protein -
NBY18_RS03645 (745215) 745215..745988 - 774 WP_001295627.1 zinc transporter ZupT -
NBY18_RS03650 (746131) 746131..746919 + 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
NBY18_RS03655 (746965) 746965..747636 - 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
NBY18_RS03660 (747651) 747651..748319 - 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
NBY18_RS03665 (748337) 748337..750133 - 1797 WP_000459865.1 aryl-sulfate sulfotransferase -
NBY18_RS03670 (750618) 750618..751778 - 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
NBY18_RS03675 (751784) 751784..752455 - 672 WP_000831543.1 DUF1190 family protein -
NBY18_RS03680 (752603) 752603..754084 - 1482 WP_000735289.1 outer membrane channel protein TolC -
NBY18_RS03685 (754289) 754289..754918 + 630 WP_000917117.1 ADP-ribose diphosphatase -
NBY18_RS03690 (754919) 754919..755341 + 423 WP_000833393.1 DUF1249 family protein -
NBY18_RS03695 (755366) 755366..756193 + 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
NBY18_RS03700 (756193) 756193..756774 + 582 WP_000105733.1 esterase YqiA -
NBY18_RS03705 (756803) 756803..758695 + 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
NBY18_RS03710 (758759) 758759..760900 - 2142 WP_001240663.1 TonB-dependent siderophore receptor -
NBY18_RS03715 (761274) 761274..762083 + 810 WP_000940869.1 putative siderophore transport system ATP-binding protein YusV VF
NBY18_RS03720 (762080) 762080..763063 + 984 WP_000986428.1 putative siderophore transport system permease protein YfiZ VF
NBY18_RS03725 (763072) 763072..764109 + 1038 WP_001298372.1 Iron-uptake system permease protein FeuC VF
NBY18_RS03730 (764120) 764120..765067 + 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
NBY18_RS03735 (765064) 765064..765951 + 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
NBY18_RS03740 (765996) 765996..766310 - 315 WP_000633738.1 putative quinol monooxygenase -
NBY18_RS03745 (766341) 766341..766922 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
NBY18_RS03750 (767172) 767172..767651 + 480 WP_000069056.1 Major exported protein VF
NBY18_RS03755 (767654) 767654..768364 + 711 WP_000834021.1 hypothetical protein -
NBY18_RS03760 (768371) 768371..768703 + 333 WP_000914696.1 DUF2645 family protein -
NBY18_RS03765 (768749) 768749..770098 - 1350 WP_000673382.1 quorum sensing histidine kinase QseC -
NBY18_RS03770 (770095) 770095..770754 - 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
NBY18_RS03775 (770906) 770906..771298 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
NBY18_RS03780 (771351) 771351..771833 + 483 WP_000183493.1 GyrI-like domain-containing protein -
NBY18_RS03785 (771942) 771942..773549 + 1608 WP_001350728.1 ABC transporter substrate-binding protein -
NBY18_RS03790 (773687) 773687..775945 + 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
NBY18_RS03795 (776180) 776180..776917 + 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
NBY18_RS03800 (776992) 776992..778404 + 1413 WP_000059395.1 cell division protein FtsP -
NBY18_RS03805 (778475) 778475..779779 - 1305 WP_001298381.1 TRAP transporter large permease subunit -
NBY18_RS03810 (779790) 779790..780272 - 483 WP_001259754.1 TRAP transporter small permease -
NBY18_RS03815 (780314) 780314..781297 - 984 WP_000645959.1 TRAP transporter substrate-binding protein -
NBY18_RS03820 (781370) 781370..782380 - 1011 WP_000214536.1 putative oxidoreductase YjmC VF
NBY18_RS03825 (782391) 782391..783407 - 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
NBY18_RS03830 (783404) 783404..784876 - 1473 WP_001331680.1 mannitol dehydrogenase family protein -
NBY18_RS03835 (785199) 785199..785948 - 750 WP_000438655.1 FadR/GntR family transcriptional regulator -
NBY18_RS03840 (786200) 786200..788419 + 2220 WP_167823496.1 YgiQ family radical SAM protein -
NBY18_RS03845 (788461) 788461..788718 - 258 WP_000848521.1 lipoprotein YqhH -
NBY18_RS03850 (788769) 788769..789695 - 927 WP_000691616.1 YbjP/YqhG family protein -
NBY18_RS03855 (789895) 789895..790722 - 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
NBY18_RS03860 (790827) 790827..791990 - 1164 WP_001058819.1 alcohol dehydrogenase -
NBY18_RS03865 (792184) 792184..793083 + 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
NBY18_RS03870 (793123) 793123..793782 - 660 WP_000268419.1 DedA family general envelope maintenance protein YghB -
NBY18_RS03875 (793922) 793922..795109 - 1188 WP_000763935.1 cystathionine beta-lyase -
NBY18_RS03880 (795361) 795361..796095 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
NBY18_RS03885 (796102) 796102..796527 + 426 WP_001240712.1 TonB system transport protein ExbD -
NBY18_RS03890 (796566) 796566..797450 - 885 WP_000018758.1 putative oxidoreductase YghA VF
NBY18_RS03895 (797641) 797641..798135 + 495 WP_000439331.1 TIGR00645 family protein -
NBY18_RS03900 (798175) 798175..799215 - 1041 WP_000262189.1 L-glyceraldehyde 3-phosphate reductase -
NBY18_RS03905 (799372) 799372..800259 + 888 WP_001350729.1 YghX family hydrolase -
NBY18_RS03910 (800378) 800378..800665 + 288 WP_001059136.1 DUF2623 family protein YghW -
NBY18_RS03915 (800854) 800854..801972 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
NBY18_RS03920 (801975) 801975..802961 + 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
NBY18_RS03925 (802951) 802951..804129 + 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
NBY18_RS03930 (804126) 804126..805829 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
NBY18_RS03935 (805829) 805829..806323 + 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
NBY18_RS03940 (806316) 806316..806804 + 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
NBY18_RS03945 (806797) 806797..807138 + 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
NBY18_RS03950 (807151) 807151..807399 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
NBY18_RS03955 (807532) 807532..808398 - 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
NBY18_RS03960 (808603) 808603..810462 + 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
NBY18_RS03965 (810754) 810754..812253 + 1500 WP_000933275.1 inorganic phosphate transporter PitB -
NBY18_RS03970 (812302) 812302..812994 - 693 WP_001190683.1 dTMP kinase -
NBY18_RS03975 (813169) 813169..813882 + 714 WP_001076282.1 dTMP kinase -
NBY18_RS03980 (813914) 813914..814672 + 759 WP_001445422.1 hypothetical protein -
NBY18_RS03985 (814718) 814718..816067 + 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
NBY18_RS03990 (816067) 816067..816903 + 837 WP_000984967.1 hypothetical protein -
NBY18_RS03995 (816903) 816903..817463 + 561 WP_001141149.1 YtfJ family protein -
NBY18_RS04000 (817494) 817494..818564 + 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
NBY18_RS04005 (818561) 818561..819640 + 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
NBY18_RS04010 (819675) 819675..820847 - 1173 WP_000524959.1 8-amino-7-oxononanoate synthase VF
NBY18_RS04015 (820847) 820847..821095 - 249 WP_000248098.1 acyl carrier protein -
NBY18_RS04020 (821127) 821127..822041 - 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
NBY18_RS04025 (822038) 822038..823762 - 1725 WP_011703666.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
NBY18_RS04030 (824133) 824133..825275 + 1143 WP_001331688.1 protein YghO -
NBY18_RS04035 (825282) 825282..826046 - 765 WP_001314155.1 transcriptional regulator GlcC -
NBY18_RS04040 (826297) 826297..827796 + 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
NBY18_RS04045 (827796) 827796..828848 + 1053 WP_000943074.1 glycolate oxidase subunit GlcE -
NBY18_RS04050 (828859) 828859..830082 + 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
NBY18_RS04055 (830087) 830087..830491 + 405 WP_000853256.1 GlcG family protein -
NBY18_RS04060 (830513) 830513..832684 + 2172 WP_000084100.1 malate synthase G -
NBY18_RS04065 (833040) 833040..834722 + 1683 WP_000259302.1 glycolate permease GlcA -
NBY18_RS04070 (835206) 835206..839768 + 4563 WP_001034562.1 hypothetical protein VF
NBY18_RS04075 (839932) 839932..840741 + 810 WP_000895874.1 Prepilin peptidase PppA VF
NBY18_RS04080 (840807) 840807..841217 + 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
NBY18_RS04085 (841235) 841235..842194 + 960 WP_001350730.1 Type II secretion system protein C 2 VF
NBY18_RS04090 (842224) 842224..844284 + 2061 Protein_805 Secretin GspD 2 VF
NBY18_RS04095 (844284) 844284..845777 + 1494 WP_000249340.1 Type II secretion system protein E VF
NBY18_RS04100 (845777) 845777..847000 + 1224 WP_001173408.1 Type II secretion system protein F VF
NBY18_RS04105 (847017) 847017..847472 + 456 WP_001087289.1 Type II secretion system protein G VF
NBY18_RS04110 (847476) 847476..848039 + 564 WP_001115118.1 Type II secretion system protein H VF
NBY18_RS04115 (848036) 848036..848407 + 372 WP_000820096.1 hypothetical protein VF
NBY18_RS04120 (848404) 848404..849009 + 606 WP_001331694.1 Type II secretion system protein J VF
NBY18_RS04125 (849006) 849006..849983 + 978 WP_000633202.1 Putative type II secretion system protein K VF
NBY18_RS04130 (849980) 849980..851158 + 1179 WP_000097208.1 hypothetical protein VF
NBY18_RS04135 (851160) 851160..851696 + 537 WP_000942829.1 Type II secretion system protein M VF
NBY18_RS04140 (852754) 852754..853530 + 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
NBY18_RS04145 (853527) 853527..854186 + 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
NBY18_RS04150 (854236) 854236..854859 + 624 WP_000038461.1 Putative acetyltransferase EpsM VF
NBY18_RS04155 (854856) 854856..855896 + 1041 WP_000066003.1 N,N'-diacetyllegionaminic acid synthase VF
NBY18_RS04160 (855896) 855896..857152 + 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
NBY18_RS04165 (857149) 857149..858324 + 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
NBY18_RS04170 (858317) 858317..859465 + 1149 WP_000197083.1 hypothetical protein VF
NBY18_RS04175 (859455) 859455..860684 + 1230 WP_000575410.1 hypothetical protein VF
NBY18_RS04180 (860834) 860834..862039 - 1206 WP_001161829.1 hypothetical protein VF
NBY18_RS04185 (862074) 862074..864101 - 2028 WP_000579525.1 hypothetical protein VF
NBY18_RS04190 (864098) 864098..864838 - 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
NBY18_RS04195 (864848) 864848..866524 - 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
NBY18_RS04200 (866548) 866548..867696 - 1149 WP_000905916.1 hypothetical protein VF
NBY18_RS04205 (867768) 867768..868751 - 984 WP_001331698.1 Arabinose 5-phosphate isomerase KpsF VF
NBY18_RS04210 (869561) 869561..869731 - 171 Protein_829 IS110 family transposase ISEc32 Transposase
NBY18_RS04215 (870128) 870128..871663 - 1536 WP_000492897.1 hypothetical protein VF
NBY18_RS04220 (871734) 871734..872579 - 846 WP_001280513.1 DUF4942 domain-containing protein -
NBY18_RS04225 (872664) 872664..872861 - 198 WP_000839254.1 DUF957 domain-containing protein -
NBY18_RS04230 (872873) 872873..873361 - 489 WP_000761714.1 DUF5983 family protein -
NBY18_RS04235 (873358) 873358..873735 - 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
NBY18_RS04240 (873782) 873782..874159 - 378 WP_015953067.1 type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA Antitoxin Detail
NBY18_RS04245 (874238) 874238..874459 - 222 WP_000692312.1 DUF987 domain-containing protein -
NBY18_RS04250 (874528) 874528..875004 - 477 WP_001186782.1 RadC family protein -
NBY18_RS04255 (875019) 875019..875504 - 486 WP_000860054.1 antirestriction protein -
NBY18_RS04260 (875595) 875595..876413 - 819 WP_001175142.1 DUF932 domain-containing protein -
NBY18_RS04265 (876503) 876503..876736 - 234 WP_001278287.1 DUF905 family protein -
NBY18_RS04270 (876742) 876742..877419 - 678 WP_001097312.1 hypothetical protein -
NBY18_RS04275 (877567) 877567..878247 - 681 WP_001282927.1 WYL domain-containing protein -
NBY18_RS04280 (878450) 878450..879334 - 885 WP_000010416.1 50S ribosome-binding GTPase -
NBY18_RS04285 (879440) 879440..880390 + 951 WP_000157734.1 hypothetical protein -
NBY18_RS04290 (880387) 880387..881175 - 789 WP_000816188.1 hypothetical protein -
NBY18_RS04295 (882514) 882514..882687 - 174 WP_023150487.1 hypothetical protein -
NBY18_RS04300 (882867) 882867..883607 + 741 WP_001075450.1 inovirus Gp2 family protein -
NBY18_RS04305 (884389) 884389..886437 + 2049 WP_033552108.1 TonB-dependent siderophore receptor IreA -
NBY18_RS04310 (886617) 886617..887829 - 1213 Protein_849 IS256 family transposase -
NBY18_RS04315 (887831) 887831..889044 + 1214 WP_164966459.1 IS3 family transposase IS629 Transposase
NBY18_RS04320 (889260) 889260..890663 + 1404 WP_000956492.1 AAA family ATPase -
NBY18_RS04325 (890857) 890857..891501 + 645 WP_001013662.1 hypothetical protein -
NBY18_RS04330 (891637) 891637..892869 + 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
NBY18_RS04335 (892854) 892854..893499 + 646 Protein_854 ParB N-terminal domain-containing protein -
NBY18_RS04340 (893578) 893578..893847 + 270 WP_000226516.1 PerC family transcriptional regulator -
NBY18_RS04345 (893868) 893868..894512 + 645 WP_001332013.1 hypothetical protein -
NBY18_RS04350 (894577) 894577..894900 + 324 WP_015953064.1 hypothetical protein -
NBY18_RS04355 (895009) 895009..895101 - 93 Protein_858 ATP-dependent helicase -
NBY18_RS04360 (895133) 895133..895246 - 114 Protein_859 transposase DNA-binding-containing protein -
NBY18_RS04365 (895493) 895493..896740 - 1248 WP_001350739.1 two-component system response regulator PgtA -
NBY18_RS04370 (896730) 896730..898739 - 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
NBY18_RS04375 (898736) 898736..899953 - 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
NBY18_RS04380 (900352) 900352..901716 + 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
NBY18_RS04385 (901759) 901759..902124 + 366 WP_000639467.1 hypothetical protein -
NBY18_RS04390 (902159) 902159..903366 - 1208 Protein_865 IS3 family transposase ISEc48 Transposase
NBY18_RS04395 (903713) 903713..904279 + 567 WP_001126806.1 inovirus-type Gp2 protein -
NBY18_RS04400 (904537) 904537..905112 + 576 WP_000991571.1 hypothetical protein -
NBY18_RS04405 (905181) 905181..905417 + 237 WP_000958091.1 AlpA family transcriptional regulator -
NBY18_RS04410 (905760) 905760..905993 - 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
NBY18_RS04415 (906425) 906425..906739 + 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
NBY18_RS04420 (906946) 906946..907494 + 549 WP_000597759.1 Pap fimbrial major pilin protein VF
NBY18_RS04425 (907584) 907584..908144 + 561 WP_000274060.1 PAP fimbrial minor pilin protein VF
NBY18_RS04430 (908203) 908203..910713 + 2511 WP_000654934.1 Outer membrane usher protein PapC VF
NBY18_RS04435 (910799) 910799..911518 + 720 WP_001363619.1 Chaperone protein PapD VF
NBY18_RS04440 (911555) 911555..912136 + 582 WP_000261303.1 hypothetical protein VF
NBY18_RS04445 (912146) 912146..912682 + 537 WP_000597711.1 Fimbrial adapter PapK VF
NBY18_RS04450 (912709) 912709..913230 + 522 WP_000723802.1 Fimbrial protein PapE VF
NBY18_RS04455 (913305) 913305..913805 + 501 WP_000620429.1 Minor fimbrial protein PrsF VF
NBY18_RS04460 (913849) 913849..914859 + 1011 WP_000758687.1 Fimbrial adhesin PapG VF
NBY18_RS04465 (915219) 915219..915965 + 747 WP_001350744.1 invasion outer membrane protein Tia -
NBY18_RS04470 (916140) 916140..917639 + 1500 WP_001026222.1 phosphoethanolamine transferase -
NBY18_RS04475 (917748) 917748..921263 - 3516 WP_000344091.1 AAA domain-containing protein -
NBY18_RS04480 (921715) 921715..922977 - 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
NBY18_RS04490 (923356) 923356..924063 - 708 WP_000234491.1 DUF554 domain-containing protein -
NBY18_RS04495 (924216) 924216..924299 + 84 WP_212734243.1 hypothetical protein -
NBY18_RS04500 (924462) 924462..926597 + 2136 WP_000839776.1 ornithine decarboxylase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance