MGE detailed information
MGE type: Genomic_island MGE length: 19254 bp
Accession: NZ_CP098206 Location: 4275645..4294898 Organism: Escherichia coli strain Z0117EC0054 Replicon: chromosome
Accession: NZ_CP098206 Location: 4275645..4294898 Organism: Escherichia coli strain Z0117EC0054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY18_RS20905 (4271124) | 4271124..4271627 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| NBY18_RS20910 (4271640) | 4271640..4272170 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| NBY18_RS20915 (4272180) | 4272180..4274816 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| NBY18_RS20920 (4274883) | 4274883..4275608 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| NBY18_RS20925 (4275645) | 4275645..4276184 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| NBY18_RS20930 (4276249) | 4276249..4276797 | - | 549 | WP_000695592.1 | Type-1 fimbrial protein, A chain | VF |
| NBY18_RS20935 (4277280) | 4277280..4277876 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| NBY18_RS20940 (4278354) | 4278354..4278956 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NBY18_RS20945 (4280412) | 4280412..4281128 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NBY18_RS20950 (4281148) | 4281148..4282254 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NBY18_RS20955 (4282319) | 4282319..4283299 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NBY18_RS20960 (4283409) | 4283409..4283614 | + | 206 | Protein_4109 | HNH endonuclease | - |
| NBY18_RS20965 (4283882) | 4283882..4285122 | - | 1241 | Protein_4110 | helicase YjhR | - |
| NBY18_RS20970 (4285238) | 4285238..4285369 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NBY18_RS20975 (4285860) | 4285860..4286117 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NBY18_RS20980 (4286129) | 4286129..4286674 | + | 546 | WP_001350781.1 | N-acetyltransferase | Antitoxin Detail |
| NBY18_RS20985 (4286730) | 4286730..4287476 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NBY18_RS20990 (4287645) | 4287645..4287863 | + | 219 | Protein_4115 | hypothetical protein | - |
| NBY18_RS20995 (4287901) | 4287901..4288017 | + | 117 | Protein_4116 | VOC family protein | - |
| NBY18_RS21000 (4288262) | 4288262..4289383 | + | 1122 | WP_000010832.1 | M42 family metallopeptidase | - |
| NBY18_RS21005 (4289380) | 4289380..4289658 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| NBY18_RS21010 (4289670) | 4289670..4290983 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| NBY18_RS21015 (4290996) | 4290996..4291802 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| NBY18_RS21020 (4291933) | 4291933..4292364 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| NBY18_RS21025 (4292376) | 4292376..4293008 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| NBY18_RS21030 (4293025) | 4293025..4293807 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NBY18_RS21035 (4294110) | 4294110..4294898 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| NBY18_RS21040 (4294903) | 4294903..4295808 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| NBY18_RS21045 (4295819) | 4295819..4297786 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| NBY18_RS21050 (4297893) | 4297893..4299242 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|