MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP098206 Location: 3898345..3918699 Organism: Escherichia coli strain Z0117EC0054 Replicon: chromosome
Accession: NZ_CP098206 Location: 3898345..3918699 Organism: Escherichia coli strain Z0117EC0054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY18_RS19125 (3893710) | 3893710..3894168 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| NBY18_RS19130 (3894429) | 3894429..3895886 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| NBY18_RS19135 (3895943) | 3895943..3896557 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| NBY18_RS19140 (3896554) | 3896554..3897693 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| NBY18_RS19145 (3897883) | 3897883..3898335 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| NBY18_RS19150 (3898345) | 3898345..3898743 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NBY18_RS19155 (3898746) | 3898746..3899039 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NBY18_RS19160 (3899091) | 3899091..3900146 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| NBY18_RS19165 (3900217) | 3900217..3901002 | - | 786 | WP_000207544.1 | hypothetical protein | VF |
| NBY18_RS19170 (3900974) | 3900974..3902686 | + | 1713 | Protein_3759 | Flagellar biosynthesis protein FlhA | VF |
| NBY18_RS19175 (3902765) | 3902765..3902923 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| NBY18_RS19180 (3903006) | 3903006..3903503 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| NBY18_RS19185 (3903679) | 3903679..3904428 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| NBY18_RS19190 (3904740) | 3904740..3905480 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NBY18_RS19195 (3905451) | 3905451..3906218 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| NBY18_RS19200 (3906423) | 3906423..3907001 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NBY18_RS19205 (3907241) | 3907241..3909685 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| NBY18_RS19210 (3909728) | 3909728..3910174 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NBY18_RS19215 (3910355) | 3910355..3911125 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| NBY18_RS19220 (3911176) | 3911176..3911370 | - | 195 | Protein_3769 | ISAs1 family transposase | - |
| NBY18_RS19225 (3911396) | 3911396..3911884 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| NBY18_RS19230 (3911978) | 3911978..3912481 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| NBY18_RS19235 (3912710) | 3912710..3913474 | - | 765 | Protein_3772 | ISAs1 family transposase ISEc1 | Transposase |
| NBY18_RS19240 (3913732) | 3913732..3914022 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| NBY18_RS19245 (3913997) | 3913997..3915436 | - | 1440 | WP_000528853.1 | DUF4150 domain-containing protein | - |
| NBY18_RS19250 (3915429) | 3915429..3916475 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| NBY18_RS19255 (3916582) | 3916582..3918564 | - | 1983 | WP_021524646.1 | Actin cross-linking toxin VgrG1 | VF |
| NBY18_RS19260 (3918785) | 3918785..3919303 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| NBY18_RS19265 (3920009) | 3920009..3920512 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| NBY18_RS19270 (3920535) | 3920535..3922019 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| NBY18_RS19275 (3922024) | 3922024..3922449 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|