MGE detailed information
MGE type: Mobilizable plasmid MGE length: 62190 bp
Accession: NZ_CP098205 Location: 1..62190 Organism: Escherichia coli strain Z0117EC0055 Replicon: plasmid pZ0117ECO055-2
Accession: NZ_CP098205 Location: 1..62190 Organism: Escherichia coli strain Z0117EC0055 Replicon: plasmid pZ0117ECO055-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY19_RS24645 (NBY19_24615) | 376..1500 | - | 1125 | WP_000486719.1 | site-specific integrase | - |
| NBY19_RS24650 (NBY19_24620) | 1549..1857 | + | 309 | WP_001199278.1 | hypothetical protein | - |
| NBY19_RS24655 (NBY19_24625) | 2486..3730 | - | 1245 | WP_015387351.1 | hypothetical protein | VF |
| NBY19_RS24660 (NBY19_24630) | 3743..4378 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| NBY19_RS24665 (NBY19_24635) | 4382..4864 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| NBY19_RS24670 (NBY19_24640) | 4931..5488 | - | 558 | WP_000095051.1 | type 4 pilus major pilin | - |
| NBY19_RS24675 (NBY19_24645) | 5533..6642 | - | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| NBY19_RS24680 (NBY19_24650) | 6633..8171 | - | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| NBY19_RS24685 (NBY19_24655) | 8196..8690 | - | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| NBY19_RS24690 (NBY19_24660) | 8674..9984 | - | 1311 | WP_001420476.1 | type 4b pilus protein PilO2 | - |
| NBY19_RS24695 (NBY19_24665) | 10035..11678 | - | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| NBY19_RS24700 (NBY19_24670) | 11671..12189 | - | 519 | WP_015387353.1 | YfdA protein | - |
| NBY19_RS24705 (NBY19_24675) | 12236..14194 | - | 1959 | WP_000338974.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NBY19_RS24710 (NBY19_24680) | 14210..15265 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| NBY19_RS24715 (NBY19_24685) | 15284..16423 | - | 1140 | WP_015387354.1 | Type IV secretion system protein virB10 | VF |
| NBY19_RS24720 (NBY19_24690) | 16413..17183 | - | 771 | WP_015387355.1 | Type IV secretion system protein PtlF | VF |
| NBY19_RS24725 (NBY19_24695) | 17180..17914 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| NBY19_RS24730 (NBY19_24700) | 18078..20435 | - | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| NBY19_RS24735 (NBY19_24705) | 20441..20761 | - | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| NBY19_RS24740 (NBY19_24710) | 20832..21122 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| NBY19_RS24745 (NBY19_24715) | 21122..21706 | - | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| NBY19_RS24750 (NBY19_24720) | 21727..22125 | - | 399 | WP_001708012.1 | hypothetical protein | - |
| NBY19_RS24755 (NBY19_24725) | 22465..22902 | - | 438 | WP_015387358.1 | type IV pilus biogenesis protein PilM | - |
| NBY19_RS24760 (NBY19_24730) | 22908..24143 | - | 1236 | WP_001419735.1 | hypothetical protein | VF |
| NBY19_RS24765 (NBY19_24735) | 24146..24445 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NBY19_RS24770 (NBY19_24740) | 24512..25144 | - | 633 | WP_001419736.1 | hypothetical protein | - |
| NBY19_RS24775 (NBY19_24745) | 25192..26001 | + | 810 | WP_001419737.1 | DUF5710 domain-containing protein | - |
| NBY19_RS24780 (NBY19_24750) | 26048..26284 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| NBY19_RS24785 (NBY19_24755) | 26288..26935 | - | 648 | WP_001419738.1 | hypothetical protein | VF |
| NBY19_RS24790 (NBY19_24760) | 26941..27927 | - | 987 | WP_001419739.1 | type IV secretion system protein | - |
| NBY19_RS24795 (NBY19_24765) | 27931..28188 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| NBY19_RS24800 (NBY19_24770) | 28185..28487 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| NBY19_RS24805 (NBY19_24775) | 28503..28718 | - | 216 | WP_001360344.1 | hypothetical protein | - |
| NBY19_RS24810 (NBY19_24780) | 28902..29564 | - | 663 | WP_001419740.1 | hypothetical protein | - |
| NBY19_RS24815 (NBY19_24785) | 29575..29745 | - | 171 | WP_000550721.1 | hypothetical protein | - |
| NBY19_RS24820 (NBY19_24790) | 29749..30192 | - | 444 | WP_000964840.1 | NfeD family protein | - |
| NBY19_RS24825 (NBY19_24795) | 30265..31218 | - | 954 | WP_072105959.1 | SPFH domain-containing protein | - |
| NBY19_RS24830 (NBY19_24800) | 31264..31458 | - | 195 | WP_000049865.1 | DUF1187 family protein | - |
| NBY19_RS24835 (NBY19_24805) | 31451..31903 | - | 453 | WP_000101553.1 | CaiF/GrlA family transcriptional regulator | - |
| NBY19_RS24840 (NBY19_24810) | 33043..34071 | + | 1029 | WP_024172575.1 | plasmid replication initiator RepA | - |
| NBY19_RS24845 | 35120..35281 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| NBY19_RS24850 (NBY19_24815) | 35417..35569 | + | 153 | Protein_42 | DUF5431 family protein | - |
| NBY19_RS24855 (NBY19_24820) | 35514..35636 | + | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| NBY19_RS24860 (NBY19_24825) | 35785..36381 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| NBY19_RS24865 (NBY19_24830) | 36399..36683 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| NBY19_RS24870 (NBY19_24835) | 36757..37422 | - | 666 | WP_015387337.1 | division plane positioning ATPase MipZ | - |
| NBY19_RS24875 | 37644..37877 | + | 234 | WP_015387338.1 | hypothetical protein | - |
| NBY19_RS24880 (NBY19_24840) | 38009..38338 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| NBY19_RS24885 (NBY19_24845) | 38742..39257 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| NBY19_RS24890 (NBY19_24850) | 39361..39903 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| NBY19_RS24895 (NBY19_24855) | 39900..40154 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| NBY19_RS24900 (NBY19_24860) | 40151..40393 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| NBY19_RS24905 (NBY19_24865) | 40518..40862 | + | 345 | Protein_53 | WbuC family cupin fold metalloprotein | - |
| NBY19_RS24910 (NBY19_24870) | 40909..41784 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| NBY19_RS24915 (NBY19_24875) | 42037..43299 | - | 1263 | WP_250844078.1 | IS1380 family transposase ISEcp1 | Transposase |
| NBY19_RS24920 (NBY19_24880) | 43684..43917 | + | 234 | WP_000553847.1 | hypothetical protein | - |
| NBY19_RS24925 (NBY19_24885) | 44049..44336 | + | 288 | WP_000673430.1 | hypothetical protein | - |
| NBY19_RS24930 (NBY19_24890) | 44388..44762 | + | 375 | WP_015387341.1 | hypothetical protein | - |
| NBY19_RS24935 (NBY19_24895) | 44777..45070 | + | 294 | WP_000954637.1 | hypothetical protein | - |
| NBY19_RS24940 (NBY19_24900) | 45492..45935 | - | 444 | WP_000192626.1 | hypothetical protein | - |
| NBY19_RS24945 (NBY19_24905) | 46232..46414 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| NBY19_RS24950 (NBY19_24910) | 46439..46876 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NBY19_RS24955 (NBY19_24915) | 47007..47327 | - | 321 | WP_001310435.1 | hypothetical protein | - |
| NBY19_RS24960 | 47324..47611 | - | 288 | WP_020320671.1 | hypothetical protein | - |
| NBY19_RS24965 (NBY19_24920) | 47661..47839 | - | 179 | Protein_65 | hypothetical protein | - |
| NBY19_RS24970 (NBY19_24925) | 47876..48139 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| NBY19_RS24975 (NBY19_24930) | 48438..48560 | - | 123 | Protein_67 | hypothetical protein | - |
| NBY19_RS24980 (NBY19_24935) | 48580..49287 | - | 708 | WP_000108796.1 | hypothetical protein | - |
| NBY19_RS24985 (NBY19_24940) | 49289..50041 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| NBY19_RS24990 (NBY19_24945) | 50059..50460 | - | 402 | WP_000717860.1 | hypothetical protein | - |
| NBY19_RS24995 (NBY19_24950) | 50829..51170 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| NBY19_RS25000 (NBY19_24955) | 51167..55372 | + | 4206 | WP_250844079.1 | relaxase | - |
| NBY19_RS25005 (NBY19_24960) | 55415..55855 | - | 441 | WP_015387343.1 | hypothetical protein | - |
| NBY19_RS25010 (NBY19_24965) | 56100..56531 | - | 432 | WP_000465832.1 | hypothetical protein | - |
| NBY19_RS25015 (NBY19_24970) | 56677..56883 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| NBY19_RS25020 (NBY19_24975) | 57002..57322 | - | 321 | WP_000668719.1 | hypothetical protein | - |
| NBY19_RS25025 (NBY19_24980) | 57797..59953 | - | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| NBY19_RS25030 (NBY19_24985) | 59965..60552 | - | 588 | WP_015387347.1 | DUF6012 family protein | - |
| NBY19_RS25035 (NBY19_24990) | 60916..61320 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| NBY19_RS25040 (NBY19_24995) | 61336..61854 | - | 519 | WP_000698399.1 | thermonuclease family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|