MGE detailed information
MGE type: Genomic_island MGE length: 9562 bp
Accession: NZ_CP098201 Location: 4480480..4490041 Organism: Escherichia coli strain Z0117EC0056 Replicon: chromosome
Accession: NZ_CP098201 Location: 4480480..4490041 Organism: Escherichia coli strain Z0117EC0056 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY20_RS21505 (4476312) | 4476312..4477643 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| NBY20_RS21510 (4477665) | 4477665..4478654 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NBY20_RS21515 (4478753) | 4478753..4479691 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| NBY20_RS21520 (4480006) | 4480006..4480224 | + | 219 | WP_124056418.1 | transcriptional activator TdcR | - |
| NBY20_RS21525 (4480480) | 4480480..4481019 | + | 540 | WP_000675750.1 | protein YhaB | - |
| NBY20_RS21530 (4481041) | 4481041..4482228 | + | 1188 | WP_001551691.1 | YhaC family protein | - |
| NBY20_RS21540 (4482865) | 4482865..4484010 | - | 1146 | WP_001309778.1 | glycerate 2-kinase | - |
| NBY20_RS21545 (4484107) | 4484107..4484997 | - | 891 | WP_001306012.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NBY20_RS21550 (4485027) | 4485027..4485797 | - | 771 | WP_001551692.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NBY20_RS21555 (4485813) | 4485813..4487147 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NBY20_RS21560 (4487522) | 4487522..4489093 | + | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| NBY20_RS21565 (4489242) | 4489242..4489577 | + | 336 | WP_001551693.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NBY20_RS21570 (4489577) | 4489577..4490041 | + | 465 | WP_000347270.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NBY20_RS21575 (4490096) | 4490096..4490905 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NBY20_RS21580 (4491154) | 4491154..4492434 | + | 1281 | WP_001551694.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NBY20_RS21585 (4492457) | 4492457..4492930 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NBY20_RS21590 (4492941) | 4492941..4493720 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NBY20_RS21595 (4493710) | 4493710..4494588 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| NBY20_RS21600 (4494606) | 4494606..4495040 | + | 435 | WP_000948837.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|