MGE detailed information
MGE type: Prophage MGE length: 46807 bp
Accession: NZ_CP098201 Location: 2354207..2401013 Organism: Escherichia coli strain Z0117EC0056 Replicon: chromosome
Accession: NZ_CP098201 Location: 2354207..2401013 Organism: Escherichia coli strain Z0117EC0056 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY20_RS11350 (2350196) | 2350196..2350243 | + | 48 | WP_211180494.1 | protein YnaN | - |
| NBY20_RS11355 (2350257) | 2350257..2351240 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| NBY20_RS25285 (2351515) | 2351515..2351688 | + | 174 | WP_001296046.1 | protein YnaL | - |
| NBY20_RS11360 (2351718) | 2351718..2353091 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| NBY20_RS11365 (2353220) | 2353220..2354155 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| NBY20_RS11370 (2354207) | 2354207..2355442 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NBY20_RS11375 (2355444) | 2355444..2355659 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2355763) | 2355763..2355941 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2355763) | 2355763..2355941 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2355763) | 2355763..2355941 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2355763) | 2355763..2355941 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| NBY20_RS11380 (2355738) | 2355738..2355947 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| NBY20_RS11385 (2355940) | 2355940..2356134 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| NBY20_RS11390 (2356191) | 2356191..2357000 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| NBY20_RS11395 (2356993) | 2356993..2359593 | - | 2601 | WP_000105139.1 | exodeoxyribonuclease VIII | - |
| NBY20_RS11400 (2359695) | 2359695..2359970 | - | 276 | WP_000632297.1 | protein RacC | - |
| NBY20_RS11405 (2360045) | 2360045..2360215 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| NBY20_RS11410 (2360215) | 2360215..2360436 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| NBY20_RS11415 (2360878) | 2360878..2361366 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| NBY20_RS11420 (2361363) | 2361363..2361518 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| NBY20_RS25290 (2361529) | 2361529..2361663 | - | 135 | WP_072664902.1 | hypothetical protein | - |
| NBY20_RS11425 (2361966) | 2361966..2362385 | - | 420 | WP_000410102.1 | helix-turn-helix domain-containing protein | - |
| NBY20_RS11430 (2362482) | 2362482..2362724 | + | 243 | WP_045145116.1 | helix-turn-helix transcriptional regulator | - |
| NBY20_RS11435 (2362721) | 2362721..2363143 | + | 423 | WP_045145118.1 | toxin YdaT family protein | - |
| NBY20_RS11440 (2363222) | 2363222..2364010 | + | 789 | WP_021542964.1 | hypothetical protein | - |
| NBY20_RS11445 (2364017) | 2364017..2364763 | + | 747 | WP_072664903.1 | ATP-binding protein | - |
| NBY20_RS11450 (2364786) | 2364786..2365547 | + | 762 | WP_045145123.1 | DUF1627 domain-containing protein | - |
| NBY20_RS11455 (2365563) | 2365563..2365985 | + | 423 | WP_072664904.1 | DUF977 family protein | - |
| NBY20_RS11460 (2366388) | 2366388..2367428 | + | 1041 | WP_045145125.1 | DNA cytosine methyltransferase | - |
| NBY20_RS11465 (2367421) | 2367421..2369403 | + | 1983 | WP_029402337.1 | ATP-binding protein | - |
| NBY20_RS11470 (2370575) | 2370575..2371174 | + | 600 | WP_000940314.1 | DUF1367 family protein | - |
| NBY20_RS11475 (2371174) | 2371174..2371464 | + | 291 | WP_000228023.1 | DUF1364 domain-containing protein | - |
| NBY20_RS11480 (2371461) | 2371461..2372003 | + | 543 | WP_000640107.1 | DUF1133 family protein | - |
| NBY20_RS11495 (2373302) | 2373302..2373517 | + | 216 | WP_001587000.1 | phage lysis protein EssD | - |
| NBY20_RS11500 (2373517) | 2373517..2374014 | + | 498 | WP_001135296.1 | lysozyme RrrD | - |
| NBY20_RS11505 (2374231) | 2374231..2374416 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| NBY20_RS11510 (2374613) | 2374613..2376070 | + | 1458 | WP_033879697.1 | Trk system potassium transporter TrkG | - |
| NBY20_RS11515 (2376208) | 2376208..2376465 | + | 258 | Protein_2232 | ParB/Srx family N-terminal domain-containing protein | - |
| NBY20_RS11520 (2376989) | 2376989..2377921 | + | 933 | WP_001204032.1 | hypothetical protein | - |
| NBY20_RS11525 (2377899) | 2377899..2378108 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| NBY20_RS11530 (2378112) | 2378112..2379206 | + | 1095 | WP_000089446.1 | terminase small subunit | - |
| NBY20_RS11535 (2379187) | 2379187..2380488 | + | 1302 | WP_001578252.1 | terminase family protein | - |
| NBY20_RS11540 (2380491) | 2380491..2381897 | + | 1407 | WP_000763709.1 | DUF4055 domain-containing protein | - |
| NBY20_RS11545 (2381881) | 2381881..2382993 | + | 1113 | WP_001317036.1 | phage minor head protein | - |
| NBY20_RS11550 (2383098) | 2383098..2383862 | + | 765 | WP_000770038.1 | hypothetical protein | - |
| NBY20_RS11555 (2383961) | 2383961..2385100 | + | 1140 | WP_000918483.1 | P22 phage major capsid protein family protein | - |
| NBY20_RS11560 (2385143) | 2385143..2385319 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| NBY20_RS11565 (2385323) | 2385323..2385718 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| NBY20_RS11570 (2385718) | 2385718..2386101 | + | 384 | WP_000524262.1 | hypothetical protein | - |
| NBY20_RS11575 (2386102) | 2386102..2386482 | + | 381 | WP_001405084.1 | hypothetical protein | - |
| NBY20_RS11580 (2386479) | 2386479..2386871 | + | 393 | WP_000144678.1 | phage tail terminator-like protein | - |
| NBY20_RS11585 (2386898) | 2386898..2387860 | + | 963 | WP_000094292.1 | phage tail tube protein | - |
| NBY20_RS11590 (2388011) | 2388011..2388370 | + | 360 | WP_141010409.1 | protein YdaY | - |
| NBY20_RS11595 (2388844) | 2388844..2392077 | + | 3234 | WP_001587006.1 | phage tail tape measure protein | - |
| NBY20_RS11600 (2392070) | 2392070..2392408 | + | 339 | WP_000024051.1 | phage tail protein | - |
| NBY20_RS11605 (2392408) | 2392408..2393106 | + | 699 | WP_001578255.1 | phage minor tail protein L | - |
| NBY20_RS11610 (2393112) | 2393112..2393855 | + | 744 | WP_021520058.1 | C40 family peptidase | - |
| NBY20_RS11615 (2393792) | 2393792..2394394 | + | 603 | WP_050496112.1 | tail assembly protein | - |
| NBY20_RS11620 (2394455) | 2394455..2397934 | + | 3480 | WP_072664907.1 | host specificity protein J | - |
| NBY20_RS11625 (2398001) | 2398001..2398600 | + | 600 | WP_001230558.1 | Outer membrane protein X | VF |
| NBY20_RS11630 (2398665) | 2398665..2401013 | + | 2349 | WP_077250922.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NBY20_RS11635 (2401010) | 2401010..2401291 | + | 282 | WP_000654156.1 | hypothetical protein | - |
| NBY20_RS11640 (2401301) | 2401301..2402005 | + | 705 | WP_059332724.1 | tail fiber domain-containing protein | - |
| NBY20_RS11645 (2402016) | 2402016..2402309 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| NBY20_RS11650 (2402329) | 2402329..2402448 | + | 120 | Protein_2259 | tail fiber assembly protein | - |
| NBY20_RS11655 (2402661) | 2402661..2403518 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| NBY20_RS11660 (2403515) | 2403515..2404372 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| NBY20_RS11665 (2404369) | 2404369..2405196 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|