MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65262 bp
Accession: NZ_CP098197 Location: 911422..976683 Organism: Escherichia coli strain Z0117EC0062 Replicon: chromosome
Accession: NZ_CP098197 Location: 911422..976683 Organism: Escherichia coli strain Z0117EC0062 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY21_RS04425 (908023) | 908023..909171 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| NBY21_RS04430 (909243) | 909243..910226 | - | 984 | WP_001361242.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| NBY21_RS04435 (911037) | 911037..911207 | - | 171 | Protein_860 | IS110 family transposase | - |
| NBY21_RS04440 (911549) | 911549..912391 | - | 843 | Protein_861 | DUF4942 domain-containing protein | - |
| NBY21_RS04445 (912476) | 912476..912670 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| NBY21_RS04450 (912749) | 912749..912898 | - | 150 | Protein_863 | DUF5983 family protein | - |
| NBY21_RS04455 (912895) | 912895..913272 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| NBY21_RS04460 (913362) | 913362..913730 | - | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NBY21_RS04465 (913893) | 913893..914114 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| NBY21_RS04470 (914179) | 914179..914655 | - | 477 | WP_021553055.1 | RadC family protein | - |
| NBY21_RS04475 (914671) | 914671..915150 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| NBY21_RS04480 (915416) | 915416..916234 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| NBY21_RS04485 (916324) | 916324..916557 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| NBY21_RS04490 (916563) | 916563..917240 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| NBY21_RS04495 (917391) | 917391..918071 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| NBY21_RS04500 (918274) | 918274..919158 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| NBY21_RS04505 (919259) | 919259..920482 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| NBY21_RS04510 (921645) | 921645..922175 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| NBY21_RS04515 (922845) | 922845..923576 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| NBY21_RS04520 (924097) | 924097..924549 | + | 453 | WP_000558152.1 | acyltransferase | - |
| NBY21_RS04525 (925085) | 925085..926020 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| NBY21_RS04530 (926013) | 926013..926948 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| NBY21_RS04535 (927032) | 927032..928282 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| NBY21_RS04540 (928301) | 928301..929395 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| NBY21_RS04545 (930696) | 930696..931262 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| NBY21_RS04550 (931520) | 931520..932095 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| NBY21_RS04555 (932164) | 932164..932397 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| NBY21_RS25440 (932394) | 932394..932519 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| NBY21_RS04560 (932648) | 932648..932710 | + | 63 | Protein_886 | IS3 family transposase IS2 | Transposase |
| NBY21_RS04565 (932696) | 932696..932962 | - | 267 | Protein_887 | IS3 family transposase IS2 | Transposase |
| NBY21_RS04570 (933053) | 933053..934210 | + | 1158 | Protein_888 | Multidrug resistance protein MexB | VF |
| NBY21_RS04575 (934310) | 934310..934981 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| NBY21_RS04580 (935112) | 935112..935297 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| NBY21_RS04585 (935654) | 935654..936199 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| NBY21_RS04590 (936244) | 936244..937395 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| NBY21_RS04595 (937524) | 937524..938579 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| NBY21_RS04600 (938596) | 938596..939858 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| NBY21_RS04605 (940441) | 940441..940962 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| NBY21_RS04610 (940990) | 940990..941529 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| NBY21_RS04615 (942015) | 942015..942920 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| NBY21_RS04620 (943057) | 943057..943974 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| NBY21_RS04625 (944083) | 944083..946635 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| NBY21_RS04630 (946684) | 946684..947259 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| NBY21_RS04635 (947270) | 947270..947569 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| NBY21_RS04640 (947593) | 947593..949110 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| NBY21_RS04645 (949171) | 949171..949956 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| NBY21_RS04650 (949978) | 949978..950259 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| NBY21_RS04655 (950544) | 950544..951740 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| NBY21_RS04660 (951769) | 951769..952266 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| NBY21_RS04665 (952294) | 952294..952563 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| NBY21_RS04670 (952575) | 952575..953300 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| NBY21_RS04675 (953284) | 953284..954042 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| NBY21_RS04680 (954097) | 954097..954783 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| NBY21_RS04685 (954923) | 954923..956041 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| NBY21_RS04690 (956398) | 956398..956898 | + | 501 | Protein_912 | DNA-binding protein | - |
| NBY21_RS04695 (956994) | 956994..957227 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| NBY21_RS04700 (957280) | 957280..957471 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| NBY21_RS25445 (957919) | 957919..958047 | + | 129 | WP_001364398.1 | hypothetical protein | - |
| NBY21_RS04705 (958192) | 958192..958452 | + | 261 | Protein_916 | IS3 family transposase ISLad1 | Transposase |
| NBY21_RS04710 (958595) | 958595..960340 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| NBY21_RS04715 (960496) | 960496..960682 | + | 187 | Protein_918 | hypothetical protein | - |
| NBY21_RS04720 (960734) | 960734..960913 | + | 180 | Protein_919 | hypothetical protein | VF |
| NBY21_RS04725 (960910) | 960910..961323 | + | 414 | Protein_920 | group II intron maturase-specific domain-containing protein | - |
| NBY21_RS04730 (961407) | 961407..961886 | + | 480 | Protein_921 | IS3 family transposase IS629 | Transposase |
| NBY21_RS04735 (961898) | 961898..962071 | + | 174 | Protein_922 | hypothetical protein | - |
| NBY21_RS04740 (962084) | 962084..962341 | - | 258 | Protein_923 | IS3 family transposase IS911 | Transposase |
| NBY21_RS04745 (962411) | 962411..962758 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| NBY21_RS04750 (963376) | 963376..964069 | - | 694 | Protein_925 | IS1 family transposase IS1N | Transposase |
| NBY21_RS04755 (964322) | 964322..965791 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| NBY21_RS04760 (965896) | 965896..968265 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| NBY21_RS04765 (968340) | 968340..969839 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| NBY21_RS04770 (969982) | 969982..970679 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| NBY21_RS04775 (971146) | 971146..971697 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| NBY21_RS04780 (971864) | 971864..972655 | - | 792 | Protein_931 | IS3 family transposase | - |
| NBY21_RS04790 (973899) | 973899..974942 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| NBY21_RS04795 (975198) | 975198..976463 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| NBY21_RS04805 (976842) | 976842..977549 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| NBY21_RS04810 (977702) | 977702..977779 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| NBY21_RS04815 (977942) | 977942..980077 | + | 2136 | WP_000839790.1 | ornithine decarboxylase | - |
| NBY21_RS04820 (980126) | 980126..981382 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|