MGE detailed information
MGE type: Genomic_island MGE length: 17744 bp
Accession: NZ_CP098197 Location: 4328267..4346010 Organism: Escherichia coli strain Z0117EC0062 Replicon: chromosome
Accession: NZ_CP098197 Location: 4328267..4346010 Organism: Escherichia coli strain Z0117EC0062 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY21_RS20580 (4324797) | 4324797..4325522 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| NBY21_RS20585 (4325559) | 4325559..4326098 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| NBY21_RS20590 (4326163) | 4326163..4326711 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| NBY21_RS20595 (4327193) | 4327193..4327789 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| NBY21_RS20600 (4328267) | 4328267..4328869 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NBY21_RS20605 (4330325) | 4330325..4331041 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NBY21_RS20610 (4331061) | 4331061..4332167 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NBY21_RS20615 (4332232) | 4332232..4333212 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NBY21_RS20620 (4333322) | 4333322..4333527 | + | 206 | Protein_4035 | HNH endonuclease | - |
| NBY21_RS20625 (4333827) | 4333827..4334807 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| NBY21_RS20630 (4334994) | 4334994..4336234 | - | 1241 | Protein_4037 | helicase YjhR | - |
| NBY21_RS20635 (4336350) | 4336350..4336481 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NBY21_RS20640 (4336972) | 4336972..4337229 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NBY21_RS20645 (4337241) | 4337241..4337786 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| NBY21_RS20650 (4337842) | 4337842..4338588 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NBY21_RS20655 (4338757) | 4338757..4338975 | + | 219 | Protein_4042 | hypothetical protein | - |
| NBY21_RS20660 (4339013) | 4339013..4339129 | + | 117 | Protein_4043 | VOC family protein | - |
| NBY21_RS20665 (4339374) | 4339374..4340495 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| NBY21_RS20670 (4340492) | 4340492..4340770 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| NBY21_RS20675 (4340782) | 4340782..4342095 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| NBY21_RS20680 (4342108) | 4342108..4342914 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| NBY21_RS20685 (4343045) | 4343045..4343476 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| NBY21_RS20690 (4343488) | 4343488..4344120 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| NBY21_RS20695 (4344137) | 4344137..4344919 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NBY21_RS20700 (4345222) | 4345222..4346010 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| NBY21_RS20705 (4346015) | 4346015..4346920 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| NBY21_RS20710 (4346931) | 4346931..4348898 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| NBY21_RS20715 (4349005) | 4349005..4350354 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|